RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 ZNF564Q8TBZ8 553 aaPredicted RBP17.36■□□□□ 0.37
SPTAN1-214ENST00000628614 CENPTQ96BT3 561 aa17.36■□□□□ 0.37
SPTAN1-214ENST00000628614 BTBD6Q96KE9 485 aa17.36■□□□□ 0.37
SPTAN1-214ENST00000628614 CSPG4P5Q96PW8 444 aa17.36■□□□□ 0.37
SPTAN1-214ENST00000628614 WRAP53Q9BUR4 548 aaKnown RBP17.36■□□□□ 0.37
SPTAN1-214ENST00000628614 UCKL1Q9NWZ5 548 aa17.36■□□□□ 0.37
SPTAN1-214ENST00000628614 SEPT3Q9UH03 358 aa17.36■□□□□ 0.37
SPTAN1-214ENST00000628614 TRIM38O00635 465 aa17.35■□□□□ 0.37
SPTAN1-214ENST00000628614 TOR1BO14657 336 aa17.35■□□□□ 0.37
SPTAN1-214ENST00000628614 BUB1BO60566 1050 aaPredicted RBP17.35■□□□□ 0.37
SPTAN1-214ENST00000628614 CSF2P04141 144 aa17.35■□□□□ 0.37
SPTAN1-214ENST00000628614 NME1P15531 152 aaKnown RBP17.35■□□□□ 0.37
SPTAN1-214ENST00000628614 ACP1P24666 158 aa17.35■□□□□ 0.37
SPTAN1-214ENST00000628614 IGFALSP35858 605 aa17.35■□□□□ 0.37
SPTAN1-214ENST00000628614 RGRP47804 291 aa17.35■□□□□ 0.37
SPTAN1-214ENST00000628614 YPEL5P62699 121 aa17.35■□□□□ 0.37
SPTAN1-214ENST00000628614 PTK2BQ14289 1009 aa17.35■□□□□ 0.37
SPTAN1-214ENST00000628614 HADHQ16836 314 aaKnown RBP17.35■□□□□ 0.37
SPTAN1-214ENST00000628614 SPECC1LQ69YQ0 1117 aa17.35■□□□□ 0.37
SPTAN1-214ENST00000628614 CAMK1DQ8IU85 385 aa17.35■□□□□ 0.37
SPTAN1-214ENST00000628614 PSKH2Q96QS6 385 aa17.35■□□□□ 0.37
SPTAN1-214ENST00000628614 DUSP23Q9BVJ7 150 aa17.35■□□□□ 0.37
SPTAN1-214ENST00000628614 TSPY26PQ9H489 355 aa17.35■□□□□ 0.37
SPTAN1-214ENST00000628614 CCDC86Q9H6F5 360 aaKnown RBP17.35■□□□□ 0.37
SPTAN1-214ENST00000628614 PCDH12Q9NPG4 1184 aa17.35■□□□□ 0.37
SPTAN1-214ENST00000628614 NLGN3Q9NZ94 848 aa17.35■□□□□ 0.37
SPTAN1-214ENST00000628614 RCOR3Q9P2K3 495 aaPredicted RBP17.35■□□□□ 0.37
SPTAN1-214ENST00000628614 NENFQ9UMX5 172 aa17.35■□□□□ 0.37
SPTAN1-214ENST00000628614 PTPRBP23467 1997 aa17.35■□□□□ 0.37
SPTAN1-214ENST00000628614 SCAMP1O15126 338 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 FFAR2O15552 330 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 ZZEF1O43149 2961 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 CAPNS1P04632 268 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 TPM1P09493 284 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 ITIH2P19823 946 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 AMPD1P23109 780 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 EIF4A3P38919 411 aaKnown RBP17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 THOP1P52888 689 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 AP1S1P61966 158 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 DAB2P98082 770 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 BCL2L1Q07817 233 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 KRT81Q14533 505 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 ZNF235Q14590 738 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 LBRQ14739 615 aaKnown RBP17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 ZNF542PQ5EBM4 170 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 TXNRD3NBQ6F5E7 133 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 PROSER1Q86XN7 944 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 ATPAF2Q8N5M1 289 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 ZNF548Q8NEK5 533 aaPredicted RBP17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 OR8K1Q8NGG5 319 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 CTNNBL1Q8WYA6 563 aaPredicted RBP17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 DNAJC7Q99615 494 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 PCDH18Q9HCL0 1135 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 ETNK2Q9NVF9 386 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 EVA1BQ9NVM1 165 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 CTTNBP2NLQ9P2B4 639 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 UVRAGQ9P2Y5 699 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 LCMT1Q9UIC8 334 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 ATP8A1Q9Y2Q0 1164 aa17.34■□□□□ 0.37
SPTAN1-214ENST00000628614 FAM149AA5PLN7 773 aa17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 SRRM3A6NNA2 597 aaPredicted RBP17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 RIOK3O14730 519 aaKnown RBP17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 H2AFZP0C0S5 128 aa17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 C6P13671 934 aa17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 JUPP14923 745 aa17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 HSPA9P38646 679 aaKnown RBP17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 MMP12P39900 470 aa17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 SSR1P43307 286 aaKnown RBP17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 SCNN1BP51168 640 aa17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 CDH6P55285 790 aa17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 POLR2LP62875 67 aaKnown RBP17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 LRRC14Q15048 493 aa17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 SLC18A3Q16572 532 aa17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 TSR1Q2NL82 804 aaKnown RBP17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 H2AFVQ71UI9 128 aa17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 TP53INP2Q8IXH6 220 aa17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 BBS5Q8N3I7 341 aa17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 PAF1Q8N7H5 531 aa17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 PDCD7Q8N8D1 485 aaKnown RBP17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 TP53I13Q8NBR0 393 aaPredicted RBP17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 NSMCE1Q8WV22 266 aa17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 BTN2A2Q8WVV5 523 aa17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 ECHDC3Q96DC8 303 aa17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 DEF6Q9H4E7 631 aa17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 ZNHIT6Q9NWK9 470 aaKnown RBP17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 CSNK1G3Q9Y6M4 447 aa17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 DMXL2Q8TDJ6 3036 aa17.33■□□□□ 0.36
SPTAN1-214ENST00000628614 CFAP47Q6ZTR5 3102 aa17.32■□□□□ 0.36
SPTAN1-214ENST00000628614 PLXNB3Q9ULL4 1909 aa17.32■□□□□ 0.36
SPTAN1-214ENST00000628614 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.32■□□□□ 0.36
SPTAN1-214ENST00000628614 SSU72P8A0A1W2PR75 194 aa17.32■□□□□ 0.36
SPTAN1-214ENST00000628614 CFAP69A5D8W1 941 aa17.32■□□□□ 0.36
SPTAN1-214ENST00000628614 MUSKO15146 869 aa17.32■□□□□ 0.36
SPTAN1-214ENST00000628614 GIMD1P0DJR0 217 aa17.32■□□□□ 0.36
SPTAN1-214ENST00000628614 JUNDP17535 347 aa17.32■□□□□ 0.36
SPTAN1-214ENST00000628614 LIG3P49916 1009 aa17.32■□□□□ 0.36
SPTAN1-214ENST00000628614 SLC10A7Q0GE19 358 aa17.32■□□□□ 0.36
SPTAN1-214ENST00000628614 CAMK2BQ13554 666 aa17.32■□□□□ 0.36
SPTAN1-214ENST00000628614 AGERQ15109 404 aa17.32■□□□□ 0.36
SPTAN1-214ENST00000628614 IRF4Q15306 451 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms