RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 PCDHGA4Q9Y5G9 962 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 MAP2K7O14733 419 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 FSCN2O14926 492 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 ERBB2P04626 1255 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 HGFP14210 728 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 GSTM5P46439 218 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 ELF3P78545 371 aaPredicted RBP12.89□□□□□ -0.35
SCN8A-209ENST00000627620 C9orf57Q5W0N0 161 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 ZNF549Q6P9A3 640 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 ISLR2Q6UXK2 745 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 PIWIL4Q7Z3Z4 852 aaKnown RBP12.89□□□□□ -0.35
SCN8A-209ENST00000627620 ADAMTSL2Q86TH1 951 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 GPR156Q8NFN8 814 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 FCRL2Q96LA5 508 aaPredicted RBP12.89□□□□□ -0.35
SCN8A-209ENST00000627620 KCND1Q9NSA2 647 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 RPS6KA6Q9UK32 745 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 DRG2P55039 364 aaKnown RBP12.89□□□□□ -0.35
SCN8A-209ENST00000627620 CDC42P60953 191 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 EVX2Q03828 476 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 PPIDQ08752 370 aaKnown RBP12.89□□□□□ -0.35
SCN8A-209ENST00000627620 C16orf72Q14CZ0 275 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 HYIQ5T013 277 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 EIF3MQ7L2H7 374 aaKnown RBP12.89□□□□□ -0.35
SCN8A-209ENST00000627620 OR4L1Q8NH43 312 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 CLIP3Q96DZ5 547 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 ACSS3Q9H6R3 686 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 RAP2CQ9Y3L5 183 aa12.89□□□□□ -0.35
SCN8A-209ENST00000627620 EFCAB10A6NFE3 127 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 NT5C1B-RDH14C9J2C7 533 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 OTCP00480 354 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 ALOX12P18054 663 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 DGCR6Q14129 220 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 TAF13Q15543 124 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 PDK4Q16654 411 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 SPANXN2Q5MJ10 180 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 RNF44Q7L0R7 432 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 TNS4Q8IZW8 715 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 HDAC10Q969S8 669 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 SPAG4Q9NPE6 437 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 XPR1Q9UBH6 696 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 FBXO5Q9UKT4 447 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 NOL9Q5SY16 702 aaKnown RBP12.88□□□□□ -0.35
SCN8A-209ENST00000627620 RNF43Q68DV7 783 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 PAGE2Q7Z2X7 111 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 NET1Q7Z628 596 aaPredicted RBP12.88□□□□□ -0.35
SCN8A-209ENST00000627620 FAM84AQ96KN4 292 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 OLFM1Q99784 485 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 SNX15Q9NRS6 342 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 PACSIN3Q9UKS6 424 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 SPATA2Q9UM82 520 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 NR2E3Q9Y5X4 410 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 EPS8Q12929 822 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 LIPMQ5VYY2 423 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 TXNDC11Q6PKC3 985 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 PPTC7Q8NI37 304 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 RDH11Q8TC12 318 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 TSPAN18Q96SJ8 248 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 BRD9Q9H8M2 597 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 PNMA8CA0A1B0GUJ8 204 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 CCDC189A1A4V9 331 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 RGSL1A5PLK6 1076 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 BRMS1LQ5PSV4 323 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 MON1AQ86VX9 555 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 FUKQ8N0W3 1084 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 MREGQ8N565 214 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 JOSD2Q8TAC2 188 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 DNAJC1Q96KC8 554 aaKnown RBP12.88□□□□□ -0.35
SCN8A-209ENST00000627620 SLC39A8Q9C0K1 460 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 ANGPT4Q9Y264 503 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 SLC9A8Q9Y2E8 581 aa12.88□□□□□ -0.35
SCN8A-209ENST00000627620 OR6C75A6NL08 312 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 HDAC3O15379 428 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 UNC5CO95185 931 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 HIST1H2ABP04908 130 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 FGF1P05230 155 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 CES1P23141 567 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 MC4RP32245 332 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 ATP6V0D1P61421 351 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 UBAP2LQ14157 1087 aaKnown RBP12.87□□□□□ -0.35
SCN8A-209ENST00000627620 GPAT3Q53EU6 434 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 ARSHQ5FYA8 562 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 IRGCQ6NXR0 463 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 TATDN1Q6P1N9 297 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 HIST3H2AQ7L7L0 130 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 ARMC8Q8IUR7 673 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 OFCC1Q8IZS5 231 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 ENKURQ8TC29 256 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 NELL1Q92832 810 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 HIST1H2ACQ93077 130 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 SLC4A5Q9BY07 1137 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 CNTNAP1P78357 1384 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 PAGE1O75459 146 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 CAPN1P07384 714 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 HNRNPLP14866 589 aaKnown RBP eCLIP12.87□□□□□ -0.35
SCN8A-209ENST00000627620 WNT3AP56704 352 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 TNK2Q07912 1038 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 DEFB115Q30KQ5 88 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 SLC25A52Q3SY17 297 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 OR52L1Q8NGH7 329 aa12.87□□□□□ -0.35
SCN8A-209ENST00000627620 KLHL5Q96PQ7 755 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms