RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 PPM1JQ5JR12 505 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 PIP4P1Q86T03 277 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 RFX6Q8HWS3 928 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 PAF1Q8N7H5 531 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 CCNYQ8ND76 341 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 ACRBPQ8NEB7 543 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 KIAA1524Q8TCG1 905 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 LENG8Q96PV6 779 aaPredicted RBP16.9■□□□□ 0.3
UBE3D-208ENST00000626828 LACRTQ9GZZ8 138 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 IL21RQ9HBE5 538 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 SCUBE2Q9NQ36 999 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 GDF3Q9NR23 364 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 TM7SF3Q9NS93 570 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 DTLQ9NZJ0 730 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 AMACRQ9UHK6 382 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 SALL4Q9UJQ4 1053 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 PCDHGB2Q9Y5G2 931 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 DUSP10Q9Y6W6 482 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 ANKRD36A6QL64 1941 aa16.9■□□□□ 0.3
UBE3D-208ENST00000626828 KCNK3O14649 394 aa16.89■□□□□ 0.29
UBE3D-208ENST00000626828 CCNB1P14635 433 aa16.89■□□□□ 0.29
UBE3D-208ENST00000626828 CR2P20023 1033 aa16.89■□□□□ 0.29
UBE3D-208ENST00000626828 KIF5AQ12840 1032 aa16.89■□□□□ 0.29
UBE3D-208ENST00000626828 TFDP2Q14188 446 aa16.89■□□□□ 0.29
UBE3D-208ENST00000626828 ERAP2Q6P179 960 aa16.89■□□□□ 0.29
UBE3D-208ENST00000626828 LAYNQ6UX15 382 aa16.89■□□□□ 0.29
UBE3D-208ENST00000626828 MFSD7Q6UXD7 560 aa16.89■□□□□ 0.29
UBE3D-208ENST00000626828 DBX2Q6ZNG2 339 aa16.89■□□□□ 0.29
UBE3D-208ENST00000626828 BZW1Q7L1Q6 419 aaKnown RBP16.89■□□□□ 0.29
UBE3D-208ENST00000626828 DCP2Q8IU60 420 aaKnown RBP16.89■□□□□ 0.29
UBE3D-208ENST00000626828 KATNAL2Q8IYT4 538 aa16.89■□□□□ 0.29
UBE3D-208ENST00000626828 PGBD5Q8N414 524 aa16.89■□□□□ 0.29
UBE3D-208ENST00000626828 PLD5Q8N7P1 536 aa16.89■□□□□ 0.29
UBE3D-208ENST00000626828 TMEM145Q8NBT3 493 aa16.89■□□□□ 0.29
UBE3D-208ENST00000626828 CXorf40AQ8TE69 158 aa16.89■□□□□ 0.29
UBE3D-208ENST00000626828 MAML1Q92585 1016 aa16.89■□□□□ 0.29
UBE3D-208ENST00000626828 HDAC11Q96DB2 347 aa16.89■□□□□ 0.29
UBE3D-208ENST00000626828 ECHDC3Q96DC8 303 aa16.89■□□□□ 0.29
UBE3D-208ENST00000626828 MGME1Q9BQP7 344 aa16.89■□□□□ 0.29
UBE3D-208ENST00000626828 BRD8Q9H0E9 1235 aa16.89■□□□□ 0.29
UBE3D-208ENST00000626828 ERVMER34-1Q9H9K5 563 aa16.89■□□□□ 0.29
UBE3D-208ENST00000626828 NOD2Q9HC29 1040 aa16.89■□□□□ 0.29
UBE3D-208ENST00000626828 NT5MQ9NPB1 228 aa16.89■□□□□ 0.29
UBE3D-208ENST00000626828 RBM22Q9NW64 420 aaKnown RBP eCLIP16.89■□□□□ 0.29
UBE3D-208ENST00000626828 HEY1Q9Y5J3 304 aa16.89■□□□□ 0.29
UBE3D-208ENST00000626828 DCHS1Q96JQ0 3298 aa16.88■□□□□ 0.29
UBE3D-208ENST00000626828 H0Y8X5 98 aa16.88■□□□□ 0.29
UBE3D-208ENST00000626828 TRAFD1O14545 582 aaPredicted RBP16.88■□□□□ 0.29
UBE3D-208ENST00000626828 RIOK3O14730 519 aaKnown RBP16.88■□□□□ 0.29
UBE3D-208ENST00000626828 MMP20O60882 483 aa16.88■□□□□ 0.29
UBE3D-208ENST00000626828 NEBLO76041 1014 aa16.88■□□□□ 0.29
UBE3D-208ENST00000626828 TM7SF2O76062 418 aa16.88■□□□□ 0.29
UBE3D-208ENST00000626828 MAP3K6O95382 1288 aa16.88■□□□□ 0.29
UBE3D-208ENST00000626828 ITIH2P19823 946 aa16.88■□□□□ 0.29
UBE3D-208ENST00000626828 CDKN2BP42772 138 aa16.88■□□□□ 0.29
UBE3D-208ENST00000626828 NR2C2P49116 596 aa16.88■□□□□ 0.29
UBE3D-208ENST00000626828 NOVA1P51513 510 aaKnown RBP16.88■□□□□ 0.29
UBE3D-208ENST00000626828 NXPH1P58417 271 aa16.88■□□□□ 0.29
UBE3D-208ENST00000626828 ITKQ08881 620 aa16.88■□□□□ 0.29
UBE3D-208ENST00000626828 FGL2Q14314 439 aa16.88■□□□□ 0.29
UBE3D-208ENST00000626828 PDK1Q15118 436 aa16.88■□□□□ 0.29
UBE3D-208ENST00000626828 TAZQ16635 292 aa16.88■□□□□ 0.29
UBE3D-208ENST00000626828 CCDC13Q8IYE1 715 aa16.88■□□□□ 0.29
UBE3D-208ENST00000626828 OXR1Q8N573 874 aa16.88■□□□□ 0.29
UBE3D-208ENST00000626828 EXD1Q8NHP7 514 aa16.88■□□□□ 0.29
UBE3D-208ENST00000626828 ELF4Q99607 663 aaPredicted RBP16.88■□□□□ 0.29
UBE3D-208ENST00000626828 C1QTNF7Q9BXJ2 289 aa16.88■□□□□ 0.29
UBE3D-208ENST00000626828 GOLPH3Q9H4A6 298 aa16.88■□□□□ 0.29
UBE3D-208ENST00000626828 PCDH12Q9NPG4 1184 aa16.88■□□□□ 0.29
UBE3D-208ENST00000626828 GGT7Q9UJ14 662 aa16.88■□□□□ 0.29
UBE3D-208ENST00000626828 ITM2BQ9Y287 266 aa16.88■□□□□ 0.29
UBE3D-208ENST00000626828 FNDC3AQ9Y2H6 1198 aaKnown RBP16.88■□□□□ 0.29
UBE3D-208ENST00000626828 PCDHGC4Q9Y5F7 938 aa16.88■□□□□ 0.29
UBE3D-208ENST00000626828 TDRD6O60522 2096 aaKnown RBP16.87■□□□□ 0.29
UBE3D-208ENST00000626828 TMEM131Q92545 1883 aa16.87■□□□□ 0.29
UBE3D-208ENST00000626828 A0A1B0GTQ1 180 aa16.87■□□□□ 0.29
UBE3D-208ENST00000626828 TTC24A2A3L6 582 aaPredicted RBP16.87■□□□□ 0.29
UBE3D-208ENST00000626828 CFAP69A5D8W1 941 aa16.87■□□□□ 0.29
UBE3D-208ENST00000626828 FPGTO14772 594 aa16.87■□□□□ 0.29
UBE3D-208ENST00000626828 SPINT1O43278 529 aa16.87■□□□□ 0.29
UBE3D-208ENST00000626828 HTRA2O43464 458 aaPredicted RBP16.87■□□□□ 0.29
UBE3D-208ENST00000626828 SH3BP5O60239 455 aa16.87■□□□□ 0.29
UBE3D-208ENST00000626828 PCDHGA12O60330 932 aa16.87■□□□□ 0.29
UBE3D-208ENST00000626828 SOCS5O75159 536 aa16.87■□□□□ 0.29
UBE3D-208ENST00000626828 THEGLP0DJG4 465 aa16.87■□□□□ 0.29
UBE3D-208ENST00000626828 NFKBIAP25963 317 aa16.87■□□□□ 0.29
UBE3D-208ENST00000626828 RXRGP48443 463 aa16.87■□□□□ 0.29
UBE3D-208ENST00000626828 ARRB1P49407 418 aaPredicted RBP16.87■□□□□ 0.29
UBE3D-208ENST00000626828 MAXP61244 160 aa16.87■□□□□ 0.29
UBE3D-208ENST00000626828 FAM193AP78312 1265 aa16.87■□□□□ 0.29
UBE3D-208ENST00000626828 PPIDQ08752 370 aaKnown RBP16.87■□□□□ 0.29
UBE3D-208ENST00000626828 TFDP3Q5H9I0 405 aa16.87■□□□□ 0.29
UBE3D-208ENST00000626828 LRRC73Q5JTD7 316 aa16.87■□□□□ 0.29
UBE3D-208ENST00000626828 PRAMEF14Q5SWL7 426 aa16.87■□□□□ 0.29
UBE3D-208ENST00000626828 SPOCD1Q6ZMY3 1216 aa16.87■□□□□ 0.29
UBE3D-208ENST00000626828 ABI3BPQ7Z7G0 1075 aa16.87■□□□□ 0.29
UBE3D-208ENST00000626828 DEFB124Q8NES8 71 aa16.87■□□□□ 0.29
UBE3D-208ENST00000626828 SPOCK2Q92563 424 aa16.87■□□□□ 0.29
UBE3D-208ENST00000626828 RBM41Q96IZ5 413 aaKnown RBP16.87■□□□□ 0.29
UBE3D-208ENST00000626828 BMFQ96LC9 184 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms