RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	LYL1	P12980	280 aa		6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	AKR1A1	P14550	325 aa		6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	ATP5F1	P24539	256 aa	Predicted RBP	6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	EPHB2	P29323	1055 aa		6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	RAD52	P43351	418 aa		6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	CRKL	P46109	303 aa	Known RBP	6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	PIP4K2A	P48426	406 aa	Predicted RBP	6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	CCT4	P50991	539 aa	Known RBP	6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	HSF1	Q00613	529 aa		6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	POU5F1	Q01860	360 aa	Known RBP	6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	MTA1	Q13330	715 aa		6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	FAM133B	Q5BKY9	247 aa	Known RBP	6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	FAM205BP	Q63HN1	556 aa		6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	ZNF530	Q6P9A1	599 aa	Predicted RBP	6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	SYNE3	Q6ZMZ3	975 aa		6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	UBE2Q1	Q7Z7E8	422 aa		6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	CHD1L	Q86WJ1	897 aa		6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	OR8H2	Q8N162	312 aa		6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	C9orf106	Q8NAJ2	232 aa		6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	LINS1	Q8NG48	757 aa		6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	NFKBID	Q8NI38	313 aa		6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	CD180	Q99467	661 aa		6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	C1QTNF7	Q9BXJ2	289 aa		6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	QTRT1	Q9BXR0	403 aa	Known RBP	6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	HDHD5	Q9BXW7	423 aa		6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	TAS2R10	Q9NYW0	307 aa		6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	TBC1D14	Q9P2M4	693 aa		6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	CNPY2	Q9Y2B0	182 aa		6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	PKP3	Q9Y446	797 aa		6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	SIPA1L3	O60292	1781 aa	Predicted RBP	6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	UBR2	Q8IWV8	1755 aa		6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	TIAM2	Q8IVF5	1701 aa		6.11	□□□□□ -1.43
NRXN1-223	ENST00000625891	CYP2D7	A0A087X1C5	515 aa		6.1	□□□□□ -1.43
NRXN1-223	ENST00000625891	C2CD4B	A6NLJ0	364 aa		6.1	□□□□□ -1.43
NRXN1-223	ENST00000625891	MCIDAS	D6RGH6	385 aa		6.1	□□□□□ -1.43
NRXN1-223	ENST00000625891	TP73	O15350	636 aa		6.1	□□□□□ -1.43
NRXN1-223	ENST00000625891	TM4SF1	P30408	202 aa		6.1	□□□□□ -1.43
NRXN1-223	ENST00000625891	ARL3	P36405	182 aa		6.1	□□□□□ -1.43
NRXN1-223	ENST00000625891	MAMLD1	Q13495	774 aa		6.1	□□□□□ -1.43
NRXN1-223	ENST00000625891	EARS2	Q5JPH6	523 aa	Known RBP	6.1	□□□□□ -1.43
NRXN1-223	ENST00000625891	NEK8	Q86SG6	692 aa		6.1	□□□□□ -1.43
NRXN1-223	ENST00000625891	UEVLD	Q8IX04	471 aa		6.1	□□□□□ -1.43
NRXN1-223	ENST00000625891	DIS3L2	Q8IYB7	885 aa	Known RBP	6.1	□□□□□ -1.43
NRXN1-223	ENST00000625891	ZNF366	Q8N895	744 aa		6.1	□□□□□ -1.43
NRXN1-223	ENST00000625891	ARL14EP	Q8N8R7	260 aa	Predicted RBP	6.1	□□□□□ -1.43
NRXN1-223	ENST00000625891	BCAS4	Q8TDM0	211 aa		6.1	□□□□□ -1.43
NRXN1-223	ENST00000625891	UBE2Q2	Q8WVN8	375 aa		6.1	□□□□□ -1.43
NRXN1-223	ENST00000625891	CUL5	Q93034	780 aa		6.1	□□□□□ -1.43
NRXN1-223	ENST00000625891	FAM118B	Q9BPY3	351 aa		6.1	□□□□□ -1.43
NRXN1-223	ENST00000625891	CLPB	Q9H078	707 aa		6.1	□□□□□ -1.43
NRXN1-223	ENST00000625891	INTS2	Q9H0H0	1204 aa	Known RBP	6.1	□□□□□ -1.43
NRXN1-223	ENST00000625891	STN1	Q9H668	368 aa	Known RBP	6.1	□□□□□ -1.43
NRXN1-223	ENST00000625891	IL21R	Q9HBE5	538 aa		6.1	□□□□□ -1.43
NRXN1-223	ENST00000625891	DIAPH3	Q9NSV4	1193 aa		6.1	□□□□□ -1.43
NRXN1-223	ENST00000625891	NKIRAS2	Q9NYR9	191 aa		6.1	□□□□□ -1.43
NRXN1-223	ENST00000625891	SLX4	Q8IY92	1834 aa		6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	USP42	Q9H9J4	1324 aa	Known RBP	6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	GAGE10	A6NGK3	116 aa		6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	DSCR3	O14972	297 aa		6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	CCNDBP1	O95273	360 aa		6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	ACADM	P11310	421 aa		6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	PRKCH	P24723	683 aa		6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	AVPR2	P30518	371 aa		6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	ZNF81	P51508	661 aa		6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	PGM5	Q15124	567 aa		6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	PRICKLE4	Q2TBC4	344 aa		6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	SUPT20HL1	Q3ZLR7	823 aa		6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	KIAA1755	Q5JYT7	1200 aa		6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	FAM69A	Q5T7M9	428 aa		6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	SLC18B1	Q6NT16	456 aa		6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	MIS18BP1	Q6P0N0	1132 aa		6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	MTFR2	Q6P444	385 aa		6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	ATF7IP	Q6VMQ6	1270 aa		6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	CPLX4	Q7Z7G2	160 aa		6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	SCN4B	Q8IWT1	228 aa		6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	ADSSL1	Q8N142	457 aa		6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	MOV10	Q9HCE1	1003 aa	Known RBP	6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	BEX4	Q9NWD9	120 aa	Predicted RBP	6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	ALKBH4	Q9NXW9	302 aa		6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	DTX4	Q9Y2E6	619 aa		6.09	□□□□□ -1.43
NRXN1-223	ENST00000625891	ERVV-2	B6SEH9	535 aa		6.08	□□□□□ -1.44
NRXN1-223	ENST00000625891	KCNJ18	B7U540	433 aa		6.08	□□□□□ -1.44
NRXN1-223	ENST00000625891	GTPBP1	O00178	669 aa	Known RBP	6.08	□□□□□ -1.44
NRXN1-223	ENST00000625891	WNT1	P04628	370 aa		6.08	□□□□□ -1.44
NRXN1-223	ENST00000625891	CLEC3B	P05452	202 aa		6.08	□□□□□ -1.44
NRXN1-223	ENST00000625891	CYP19A1	P11511	503 aa	Predicted RBP	6.08	□□□□□ -1.44
NRXN1-223	ENST00000625891	ARSA	P15289	507 aa		6.08	□□□□□ -1.44
NRXN1-223	ENST00000625891	TFEB	P19484	476 aa		6.08	□□□□□ -1.44
NRXN1-223	ENST00000625891	SSBP2	P81877	361 aa	Predicted RBP	6.08	□□□□□ -1.44
NRXN1-223	ENST00000625891	ZBTB16	Q05516	673 aa		6.08	□□□□□ -1.44
NRXN1-223	ENST00000625891	SRSF4	Q08170	494 aa	Known RBP	6.08	□□□□□ -1.44
NRXN1-223	ENST00000625891	CUL4A	Q13619	759 aa		6.08	□□□□□ -1.44
NRXN1-223	ENST00000625891	MTHFSD	Q2M296	383 aa	Known RBP	6.08	□□□□□ -1.44
NRXN1-223	ENST00000625891	OLFM4	Q6UX06	510 aa		6.08	□□□□□ -1.44
NRXN1-223	ENST00000625891	YTHDF3	Q7Z739	585 aa	Known RBP	6.08	□□□□□ -1.44
NRXN1-223	ENST00000625891	TMEM200A	Q86VY9	491 aa		6.08	□□□□□ -1.44
NRXN1-223	ENST00000625891	CCDC105	Q8IYK2	499 aa		6.08	□□□□□ -1.44
NRXN1-223	ENST00000625891		Q8N9P0	234 aa	Predicted RBP	6.08	□□□□□ -1.44
NRXN1-223	ENST00000625891	LSM14A	Q8ND56	463 aa	Known RBP	6.08	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms