RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 SPAM1P38567 509 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 NFYCQ13952 458 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 HECTD2Q5U5R9 776 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 DEPDC4Q8N2C3 294 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 ZNF398Q8TD17 642 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 RAD51AP1Q96B01 352 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 TTYH3Q9C0H2 523 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 NKX2-4Q9H2Z4 354 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 OR5K4A6NMS3 321 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 AP3D1O14617 1153 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 FCGR1AP12314 374 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 CCNB1P14635 433 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 OGNP20774 298 aaKnown RBP11.16□□□□□ -0.62
VPS8-227ENST00000625842 IRF5Q13568 498 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 SEL1L3Q68CR1 1132 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 ANO7Q6IWH7 933 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 TAPT1Q6NXT6 567 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 IYDQ6PHW0 289 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 PSTKQ8IV42 348 aaKnown RBP11.16□□□□□ -0.62
VPS8-227ENST00000625842 PARP9Q8IXQ6 854 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 ARL14EPQ8N8R7 260 aaPredicted RBP11.16□□□□□ -0.62
VPS8-227ENST00000625842 ERLEC1Q96DZ1 483 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 FAXDC2Q96IV6 333 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 ZNF717Q9BY31 904 aaPredicted RBP11.16□□□□□ -0.62
VPS8-227ENST00000625842 EFCAB1Q9HAE3 211 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 PDE7BQ9NP56 450 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 B4GALT7Q9UBV7 327 aa11.16□□□□□ -0.62
VPS8-227ENST00000625842 H0Y858 1186 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 EPN2O95208 641 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 GIMD1P0DJR0 217 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 THRAP10827 490 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 ZNF618Q5T7W0 954 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 IL27RAQ6UWB1 636 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 MCOLN2Q8IZK6 566 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 RIN3Q8TB24 985 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 C9orf72Q96LT7 481 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 RTP3Q9BQQ7 232 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 NXF3Q9H4D5 531 aaKnown RBP11.15□□□□□ -0.62
VPS8-227ENST00000625842 NRDE2Q9H7Z3 1164 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 IQGAP1P46940 1657 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 PPRC1Q5VV67 1664 aaKnown RBP11.15□□□□□ -0.62
VPS8-227ENST00000625842 RBM47A0AV96 593 aaKnown RBP11.15□□□□□ -0.62
VPS8-227ENST00000625842 SOX6P35712 828 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 CD86P42081 329 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 MAGOHP61326 146 aaKnown RBP11.15□□□□□ -0.62
VPS8-227ENST00000625842 RPL6Q02878 288 aaKnown RBP11.15□□□□□ -0.62
VPS8-227ENST00000625842 MFSD7Q6UXD7 560 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 ULK2Q8IYT8 1036 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 ACTRT2Q8TDY3 377 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 HDAC7Q8WUI4 952 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 AZIN2Q96A70 460 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 ZNF354BQ96LW1 612 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 SNX12Q9UMY4 172 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 ANGPT4Q9Y264 503 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 YIPF1Q9Y548 306 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 C5orf60A6NFR6 353 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 B4GALT4O60513 344 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 MATN4O95460 622 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 SOD2P04179 222 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 ADRA1DP25100 572 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 CTSOP43234 321 aaPredicted RBP11.15□□□□□ -0.62
VPS8-227ENST00000625842 LRRC23Q53EV4 343 aaPredicted RBP11.15□□□□□ -0.62
VPS8-227ENST00000625842 FAM133BQ5BKY9 247 aaKnown RBP11.15□□□□□ -0.62
VPS8-227ENST00000625842 FIGNQ5HY92 759 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 ABHD15Q6UXT9 468 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 RPTNQ6XPR3 784 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 DNAJB7Q7Z6W7 309 aaPredicted RBP11.15□□□□□ -0.62
VPS8-227ENST00000625842 METTL16Q86W50 562 aaKnown RBP11.15□□□□□ -0.62
VPS8-227ENST00000625842 FAM46DQ8NEK8 389 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 LMLNQ96KR4 655 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 FCRL2Q96LA5 508 aaPredicted RBP11.15□□□□□ -0.62
VPS8-227ENST00000625842 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.15□□□□□ -0.62
VPS8-227ENST00000625842 B3GAT2Q9NPZ5 323 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 FBXW2Q9UKT8 454 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 ACTL7BQ9Y614 415 aa11.15□□□□□ -0.62
VPS8-227ENST00000625842 VAPBO95292 243 aa11.15□□□□□ -0.63
VPS8-227ENST00000625842 IL12BP29460 328 aa11.15□□□□□ -0.63
VPS8-227ENST00000625842 GRB14Q14449 540 aa11.15□□□□□ -0.63
VPS8-227ENST00000625842 ANXA8L1Q5VT79 327 aa11.15□□□□□ -0.63
VPS8-227ENST00000625842 MSANTD2Q6P1R3 559 aa11.15□□□□□ -0.63
VPS8-227ENST00000625842 SIX5Q8N196 739 aa11.15□□□□□ -0.63
VPS8-227ENST00000625842 ANKHQ9HCJ1 492 aa11.15□□□□□ -0.63
VPS8-227ENST00000625842 GMIPQ9P107 970 aa11.15□□□□□ -0.63
VPS8-227ENST00000625842 ARL5CA6NH57 179 aa11.14□□□□□ -0.63
VPS8-227ENST00000625842 SIGLEC16A6NMB1 481 aa11.14□□□□□ -0.63
VPS8-227ENST00000625842 GPR37L1O60883 481 aa11.14□□□□□ -0.63
VPS8-227ENST00000625842 BMP7P18075 431 aa11.14□□□□□ -0.63
VPS8-227ENST00000625842 ALDH4A1P30038 563 aa11.14□□□□□ -0.63
VPS8-227ENST00000625842 UGT1A5P35504 534 aa11.14□□□□□ -0.63
VPS8-227ENST00000625842 ZNF143P52747 638 aaPredicted RBP11.14□□□□□ -0.63
VPS8-227ENST00000625842 FOXK1P85037 733 aa11.14□□□□□ -0.63
VPS8-227ENST00000625842 KRR1Q13601 381 aaKnown RBP11.14□□□□□ -0.63
VPS8-227ENST00000625842 PWP1Q13610 501 aa11.14□□□□□ -0.63
VPS8-227ENST00000625842 ATG14Q6ZNE5 492 aa11.14□□□□□ -0.63
VPS8-227ENST00000625842 PLD3Q8IV08 490 aa11.14□□□□□ -0.63
VPS8-227ENST00000625842 AGPAT5Q9NUQ2 364 aa11.14□□□□□ -0.63
VPS8-227ENST00000625842 SPIN1Q9Y657 262 aaPredicted RBP11.14□□□□□ -0.63
VPS8-227ENST00000625842 GLYATL1P3A0A0U1RQE8 302 aa11.14□□□□□ -0.63
VPS8-227ENST00000625842 SMIM31A0A1B0GVY4 71 aa11.14□□□□□ -0.63
VPS8-227ENST00000625842 MAGEB3O15480 346 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms