RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 SUSD2Q9UGT4 822 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 SALL4Q9UJQ4 1053 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 PPM1HQ9ULR3 514 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 PCDHGA5Q9Y5G8 931 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 PLXND1Q9Y4D7 1925 aa7.32□□□□□ -1.24
NPLOC4-221ENST00000625705 SHROOM3Q8TF72 1996 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 CEP192Q8TEP8 1941 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 BCLAF3A2AJT9 711 aaKnown RBP7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 GOLGA6L9A6NEM1 432 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 ZNF487B1APH4 448 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 KHNYNO15037 678 aaKnown RBP7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 SLC7A4O43246 635 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 FOXD2O60548 495 aaPredicted RBP7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 CST8O60676 142 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 PIGNO95427 931 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 IGLV3-19P01714 112 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 CTSLP07711 333 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 KRT10P13645 584 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 TGM2P21980 687 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 CA4P22748 312 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 ITPKAP23677 461 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 NFKBIAP25963 317 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 ITGB7P26010 798 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 MAOBP27338 520 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 MAT2AP31153 395 aaKnown RBP7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 GKP32189 559 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 CTNNA1P35221 906 aaKnown RBP7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 TNNT3P45378 269 aaPredicted RBP7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 MARCKSL1P49006 195 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 SCNN1BP51168 640 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 ARSEP51690 589 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 METAP1P53582 386 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 AP1S1P61966 158 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 CCZ1BP86790 482 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 CCZ1P86791 482 aaPredicted RBP7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 GBE1Q04446 702 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 BCL2L1Q07817 233 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 SLC10A7Q0GE19 358 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 GALNT2Q10471 571 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 PDK1Q15118 436 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 TLR1Q15399 786 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 TEAD4Q15561 434 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 ZNF805Q5CZA5 627 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 SPDYCQ5MJ68 293 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 SEL1L2Q5TEA6 688 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 AFMIDQ63HM1 303 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 MFSD7Q6UXD7 560 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 ERN2Q76MJ5 926 aaKnown RBP7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 SRLQ86TD4 932 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 PRPF39Q86UA1 669 aaKnown RBP7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 VSIG1Q86XK7 387 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 SYT12Q8IV01 421 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 TP53INP2Q8IXH6 220 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 CCDC13Q8IYE1 715 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 ZCCHC9Q8N567 271 aaKnown RBP7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 RNF10Q8N5U6 811 aaKnown RBP7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 TSEN2Q8NCE0 465 aaKnown RBP7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 TMIEQ8NEW7 156 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 CADM4Q8NFZ8 388 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 OR2T34Q8NGX1 318 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 EXD1Q8NHP7 514 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 FAM71BQ8TC56 605 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 KRT35Q92764 455 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 KLHL32Q96NJ5 620 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 TUBGCP5Q96RT8 1024 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 HEMGNQ9BXL5 484 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 C6orf106Q9H6K1 298 aaPredicted RBP7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 NT5MQ9NPB1 228 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 AASDHPPTQ9NRN7 309 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 VPS45Q9NRW7 570 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 SEMA4GQ9NTN9 838 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 EIF2B4Q9UI10 523 aaKnown RBP7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 SARDHQ9UL12 918 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 PACSIN2Q9UNF0 486 aaPredicted RBP7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 CAPN6Q9Y6Q1 641 aa7.31□□□□□ -1.24
NPLOC4-221ENST00000625705 hCG_1818297A0A087WSY0 165 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 A0A0U1RQJ8 604 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 METTL12A8MUP2 240 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 PRR5-ARHGAP8B1AHC4 643 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 H7C0C1 242 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 KCNK1O00180 336 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 BCAT2O15382 392 aaPredicted RBP7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 ZSCAN12O43309 604 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 PLRG1O43660 514 aaKnown RBP7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 MAFKO60675 156 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 RNGTTO60942 597 aaKnown RBP7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 LRP3O75074 770 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 STK10O94804 968 aaKnown RBP7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 TJP3O95049 919 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 CD160O95971 181 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 ADRB3P13945 408 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 CCNB1P14635 433 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 IL4RP24394 825 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 CCNCP24863 283 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 MSNP26038 577 aaKnown RBP7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 HOXD12P35452 270 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 DRD3P35462 400 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 CDKN2BP42772 138 aa7.3□□□□□ -1.24
NPLOC4-221ENST00000625705 MAP2K3P46734 347 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms