RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 HPCAL4Q9UM19 191 aa14.86□□□□□ -0.03
PNKP-218ENST00000625299 LRRK1Q38SD2 2015 aa14.85□□□□□ -0.03
PNKP-218ENST00000625299 TOR1BO14657 336 aa14.85□□□□□ -0.03
PNKP-218ENST00000625299 POP4O95707 220 aaKnown RBP14.85□□□□□ -0.03
PNKP-218ENST00000625299 BMP6P22004 513 aa14.85□□□□□ -0.03
PNKP-218ENST00000625299 XPAP23025 273 aaPredicted RBP14.85□□□□□ -0.03
PNKP-218ENST00000625299 HTR1BP28222 390 aa14.85□□□□□ -0.03
PNKP-218ENST00000625299 FLT3P36888 993 aa14.85□□□□□ -0.03
PNKP-218ENST00000625299 ETFBP38117 255 aa14.85□□□□□ -0.03
PNKP-218ENST00000625299 GEMIN4P57678 1058 aaKnown RBP14.85□□□□□ -0.03
PNKP-218ENST00000625299 NFATC4Q14934 902 aa14.85□□□□□ -0.03
PNKP-218ENST00000625299 CLCA4Q14CN2 919 aa14.85□□□□□ -0.03
PNKP-218ENST00000625299 LRRC14Q15048 493 aa14.85□□□□□ -0.03
PNKP-218ENST00000625299 C2CD6Q53TS8 623 aa14.85□□□□□ -0.03
PNKP-218ENST00000625299 ARTNQ5T4W7 220 aa14.85□□□□□ -0.03
PNKP-218ENST00000625299 PHF19Q5T6S3 580 aa14.85□□□□□ -0.03
PNKP-218ENST00000625299 LVRNQ6Q4G3 990 aa14.85□□□□□ -0.03
PNKP-218ENST00000625299 GBP6Q6ZN66 633 aa14.85□□□□□ -0.03
PNKP-218ENST00000625299 PLPP6Q8IY26 295 aa14.85□□□□□ -0.03
PNKP-218ENST00000625299 NETO2Q8NC67 525 aa14.85□□□□□ -0.03
PNKP-218ENST00000625299 OR6C4Q8NGE1 309 aa14.85□□□□□ -0.03
PNKP-218ENST00000625299 HTR3CQ8WXA8 447 aa14.85□□□□□ -0.03
PNKP-218ENST00000625299 CFAP57Q96MR6 1250 aa14.85□□□□□ -0.03
PNKP-218ENST00000625299 CMKLR1Q99788 373 aa14.85□□□□□ -0.03
PNKP-218ENST00000625299 SEMA3CQ99985 751 aa14.85□□□□□ -0.03
PNKP-218ENST00000625299 SLC25A18Q9H1K4 315 aa14.85□□□□□ -0.03
PNKP-218ENST00000625299 ANKMY1Q9P2S6 941 aa14.85□□□□□ -0.03
PNKP-218ENST00000625299 OR1A2Q9Y585 309 aa14.85□□□□□ -0.03
PNKP-218ENST00000625299 ANKRD36A6QL64 1941 aa14.85□□□□□ -0.03
PNKP-218ENST00000625299 ZFC3H1O60293 1989 aaKnown RBP14.84□□□□□ -0.03
PNKP-218ENST00000625299 PCCBP05166 539 aa14.84□□□□□ -0.03
PNKP-218ENST00000625299 PEX5P50542 639 aa14.84□□□□□ -0.03
PNKP-218ENST00000625299 SRP54P61011 504 aaKnown RBP14.84□□□□□ -0.03
PNKP-218ENST00000625299 ATP11AP98196 1134 aa14.84□□□□□ -0.03
PNKP-218ENST00000625299 EXOC3L4Q17RC7 722 aa14.84□□□□□ -0.03
PNKP-218ENST00000625299 FOXR2Q6PJQ5 311 aa14.84□□□□□ -0.03
PNKP-218ENST00000625299 TMEM35BQ8NCS4 154 aa14.84□□□□□ -0.03
PNKP-218ENST00000625299 C18orf8Q96DM3 657 aa14.84□□□□□ -0.03
PNKP-218ENST00000625299 PDXPQ96GD0 296 aa14.84□□□□□ -0.03
PNKP-218ENST00000625299 TIGD1Q96MW7 591 aa14.84□□□□□ -0.03
PNKP-218ENST00000625299 GDAP1L1Q96MZ0 367 aa14.84□□□□□ -0.03
PNKP-218ENST00000625299 PPARGC1AQ9UBK2 798 aaKnown RBP14.84□□□□□ -0.03
PNKP-218ENST00000625299 RNF215Q9Y6U7 377 aa14.84□□□□□ -0.03
PNKP-218ENST00000625299 FLNCQ14315 2725 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 TMEM110-MUSTN1A8MSY1 372 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 B4DGG1 531 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 C9orf172C9J069 976 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 BUB1O43683 1085 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 RAMP2O60895 175 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 TMCC1O94876 653 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 FGFR1OPO95684 399 aaKnown RBP14.83□□□□□ -0.04
PNKP-218ENST00000625299 TNFP01375 233 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 CLCN1P35523 988 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 RAD51Q06609 339 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 MORC3Q14149 939 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 INPP5AQ14642 412 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 CDO1Q16878 200 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 WSCD2Q2TBF2 565 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 MAP9Q49MG5 647 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 KCTD16Q68DU8 428 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 TRNP1Q6NT89 227 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 SPRED1Q7Z699 444 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 TAF8Q7Z7C8 310 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 XYLT1Q86Y38 959 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 SFTPA2Q8IWL1 248 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 ATL2Q8NHH9 583 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 VOPP1Q96AW1 172 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 TMEM159Q96B96 161 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 NCAPGQ9BPX3 1015 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 FUCA2Q9BTY2 467 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 APOOQ9BUR5 198 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 GEMIN8Q9NWZ8 242 aaKnown RBP14.83□□□□□ -0.04
PNKP-218ENST00000625299 DNAJC12Q9UKB3 198 aa14.83□□□□□ -0.04
PNKP-218ENST00000625299 A0A1W2PQC6 194 aa14.82□□□□□ -0.04
PNKP-218ENST00000625299 FOXN3O00409 490 aaPredicted RBP14.82□□□□□ -0.04
PNKP-218ENST00000625299 IGSF6O95976 241 aa14.82□□□□□ -0.04
PNKP-218ENST00000625299 TIMP2P16035 220 aa14.82□□□□□ -0.04
PNKP-218ENST00000625299 GLB1P16278 677 aa14.82□□□□□ -0.04
PNKP-218ENST00000625299 PON1P27169 355 aa14.82□□□□□ -0.04
PNKP-218ENST00000625299 MAPKAPK2P49137 400 aa14.82□□□□□ -0.04
PNKP-218ENST00000625299 RHOAP61586 193 aa14.82□□□□□ -0.04
PNKP-218ENST00000625299 ZFP36L1Q07352 338 aaKnown RBP14.82□□□□□ -0.04
PNKP-218ENST00000625299 ARHGEF7Q14155 803 aa14.82□□□□□ -0.04
PNKP-218ENST00000625299 SKIDA1Q1XH10 827 aa14.82□□□□□ -0.04
PNKP-218ENST00000625299 RAB6CQ53S08 254 aa14.82□□□□□ -0.04
PNKP-218ENST00000625299 CERCAMQ5T4B2 595 aa14.82□□□□□ -0.04
PNKP-218ENST00000625299 TMEM164Q5U3C3 297 aa14.82□□□□□ -0.04
PNKP-218ENST00000625299 TAF3Q5VWG9 929 aa14.82□□□□□ -0.04
PNKP-218ENST00000625299 DTX1Q86Y01 620 aa14.82□□□□□ -0.04
PNKP-218ENST00000625299 EMC1Q8N766 993 aa14.82□□□□□ -0.04
PNKP-218ENST00000625299 FAM46DQ8NEK8 389 aa14.82□□□□□ -0.04
PNKP-218ENST00000625299 GPR156Q8NFN8 814 aa14.82□□□□□ -0.04
PNKP-218ENST00000625299 EXOC2Q96KP1 924 aa14.82□□□□□ -0.04
PNKP-218ENST00000625299 WDR92Q96MX6 357 aa14.82□□□□□ -0.04
PNKP-218ENST00000625299 RAB6CQ9H0N0 254 aa14.82□□□□□ -0.04
PNKP-218ENST00000625299 MAGEH1Q9H213 219 aa14.82□□□□□ -0.04
PNKP-218ENST00000625299 SEMA6CQ9H3T2 930 aa14.82□□□□□ -0.04
PNKP-218ENST00000625299 TMEM51Q9NW97 253 aa14.82□□□□□ -0.04
PNKP-218ENST00000625299 LRIT1Q9P2V4 623 aa14.82□□□□□ -0.04
PNKP-218ENST00000625299 OR12D3Q9UGF7 316 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms