RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 DLG1Q12959 904 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 UBAP2LQ14157 1087 aaKnown RBP19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 E2F5Q15329 346 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 ZNF789Q5FWF6 425 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 WLSQ5T9L3 541 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 TMPRSS6Q8IU80 811 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 CILP2Q8IUL8 1156 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 BBS5Q8N3I7 341 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 OR7D4Q8NG98 312 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 OR52K2Q8NGK3 314 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 PEX13Q92968 403 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 PRICKLE1Q96MT3 831 aaPredicted RBP19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 DRC3Q9H069 523 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 XPR1Q9UBH6 696 aa19.86■□□□□ 0.77
PCDHB11-202ENST00000624887 B2RBV5 119 aa19.85■□□□□ 0.77
PCDHB11-202ENST00000624887 CLDN11O75508 207 aa19.85■□□□□ 0.77
PCDHB11-202ENST00000624887 STC2O76061 302 aa19.85■□□□□ 0.77
PCDHB11-202ENST00000624887 KLKB1P03952 638 aa19.85■□□□□ 0.77
PCDHB11-202ENST00000624887 HSPA8P11142 646 aaKnown RBP19.85■□□□□ 0.77
PCDHB11-202ENST00000624887 GRIA4P48058 902 aa19.85■□□□□ 0.77
PCDHB11-202ENST00000624887 RPS24P62847 133 aaKnown RBP19.85■□□□□ 0.77
PCDHB11-202ENST00000624887 ACVR1Q04771 509 aa19.85■□□□□ 0.77
PCDHB11-202ENST00000624887 USP4Q13107 963 aa19.85■□□□□ 0.77
PCDHB11-202ENST00000624887 LAMB3Q13751 1172 aa19.85■□□□□ 0.77
PCDHB11-202ENST00000624887 RCN2Q14257 317 aa19.85■□□□□ 0.77
PCDHB11-202ENST00000624887 RBM20Q5T481 1227 aaKnown RBP19.85■□□□□ 0.77
PCDHB11-202ENST00000624887 IL31Q6EBC2 164 aa19.85■□□□□ 0.77
PCDHB11-202ENST00000624887 LMNTD2Q8IXW0 634 aa19.85■□□□□ 0.77
PCDHB11-202ENST00000624887 HDAC10Q969S8 669 aa19.85■□□□□ 0.77
PCDHB11-202ENST00000624887 MCUR1Q96AQ8 359 aa19.85■□□□□ 0.77
PCDHB11-202ENST00000624887 MGME1Q9BQP7 344 aa19.85■□□□□ 0.77
PCDHB11-202ENST00000624887 DENND2DQ9H6A0 471 aaPredicted RBP19.85■□□□□ 0.77
PCDHB11-202ENST00000624887 CYP4F11Q9HBI6 524 aa19.85■□□□□ 0.77
PCDHB11-202ENST00000624887 SPECC1L-ADORA2AF8WAN1 911 aa19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 SERPINF2P08697 491 aa19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 GM2AP17900 193 aa19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 CORO1AP31146 461 aaKnown RBP19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 ALDH1A3P47895 512 aa19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 CPA2P48052 419 aa19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 GJA8P48165 433 aa19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 ARSDP51689 593 aa19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 KPNA2P52292 529 aaKnown RBP19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 DSG1Q02413 1049 aa19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 SLC14A2Q15849 920 aa19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 PREPLQ4J6C6 727 aaPredicted RBP19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 EPGNQ6UW88 154 aa19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 TDRD5Q8NAT2 981 aaKnown RBP19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 VWCEQ96DN2 955 aa19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 TRMT2BQ96GJ1 504 aaKnown RBP19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 ILKAPQ9H0C8 392 aaPredicted RBP19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 MRPL46Q9H2W6 279 aaKnown RBP19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 COG4Q9H9E3 785 aa19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 SEPT3Q9UH03 358 aa19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 YIPF1Q9Y548 306 aa19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 KDELR3O43731 214 aa19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 DLX3O60479 287 aa19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 PEX11AO75192 247 aa19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 EZRP15311 586 aaKnown RBP19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 NUMBP49757 651 aa19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 PRAMEP78395 509 aa19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 VWA5B1Q5TIE3 1220 aa19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 PTAR1Q7Z6K3 402 aaPredicted RBP19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 OR6P1Q8NGX9 317 aa19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 PSKH2Q96QS6 385 aa19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 MRPL57Q9BQC6 102 aaKnown RBP19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 GKN1Q9NS71 199 aa19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 RAP2CQ9Y3L5 183 aa19.84■□□□□ 0.77
PCDHB11-202ENST00000624887 ILVBLA1L0T0 632 aa19.83■□□□□ 0.77
PCDHB11-202ENST00000624887 DIAPH2O60879 1101 aa19.83■□□□□ 0.77
PCDHB11-202ENST00000624887 HK2P52789 917 aa19.83■□□□□ 0.77
PCDHB11-202ENST00000624887 NAGLUP54802 743 aa19.83■□□□□ 0.77
PCDHB11-202ENST00000624887 OXCT1P55809 520 aa19.83■□□□□ 0.77
PCDHB11-202ENST00000624887 KDSRQ06136 332 aa19.83■□□□□ 0.77
PCDHB11-202ENST00000624887 CFAP157Q5JU67 520 aa19.83■□□□□ 0.77
PCDHB11-202ENST00000624887 SPOUT1Q5T280 376 aaKnown RBP19.83■□□□□ 0.77
PCDHB11-202ENST00000624887 CHST9Q7L1S5 443 aa19.83■□□□□ 0.77
PCDHB11-202ENST00000624887 SLC39A11Q8N1S5 342 aa19.83■□□□□ 0.77
PCDHB11-202ENST00000624887 RBM15BQ8NDT2 890 aaKnown RBP19.83■□□□□ 0.77
PCDHB11-202ENST00000624887 TSPAN17Q96FV3 270 aa19.83■□□□□ 0.77
PCDHB11-202ENST00000624887 NDNQ99608 321 aa19.83■□□□□ 0.77
PCDHB11-202ENST00000624887 OLFM1Q99784 485 aa19.83■□□□□ 0.77
PCDHB11-202ENST00000624887 SPON2Q9BUD6 331 aa19.83■□□□□ 0.77
PCDHB11-202ENST00000624887 RNF38Q9H0F5 515 aa19.83■□□□□ 0.77
PCDHB11-202ENST00000624887 CXorf56Q9H5V9 222 aa19.83■□□□□ 0.77
PCDHB11-202ENST00000624887 RNPEPL1Q9HAU8 725 aa19.83■□□□□ 0.77
PCDHB11-202ENST00000624887 UBA2Q9UBT2 640 aaPredicted RBP19.83■□□□□ 0.77
PCDHB11-202ENST00000624887 TBX21Q9UL17 535 aa19.83■□□□□ 0.77
PCDHB11-202ENST00000624887 KCTD3Q9Y597 815 aa19.83■□□□□ 0.77
PCDHB11-202ENST00000624887 CHRNGP07510 517 aa19.83■□□□□ 0.76
PCDHB11-202ENST00000624887 ASPHQ12797 758 aa19.83■□□□□ 0.76
PCDHB11-202ENST00000624887 RFTN1Q14699 578 aaPredicted RBP19.83■□□□□ 0.76
PCDHB11-202ENST00000624887 ADGRF1Q5T601 910 aa19.83■□□□□ 0.76
PCDHB11-202ENST00000624887 SETD3Q86TU7 594 aaPredicted RBP19.83■□□□□ 0.76
PCDHB11-202ENST00000624887 ARHGAP24Q8N264 748 aa19.83■□□□□ 0.76
PCDHB11-202ENST00000624887 SPATA6LQ8N4H0 392 aa19.83■□□□□ 0.76
PCDHB11-202ENST00000624887 BRSK1Q8TDC3 778 aa19.83■□□□□ 0.76
PCDHB11-202ENST00000624887 HEXDCQ8WVB3 486 aa19.83■□□□□ 0.76
PCDHB11-202ENST00000624887 TOP1MTQ969P6 601 aa19.83■□□□□ 0.76
PCDHB11-202ENST00000624887 ZNF558Q96NG5 402 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms