RNA–Protein interactions for RNA: ENST00000624873.3

SRGAP2-217, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SRGAP2, Length 4,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-217ENST00000624873 CDK7P50613 346 aa10.27□□□□□ -0.77
SRGAP2-217ENST00000624873 CRADDP78560 199 aa10.27□□□□□ -0.77
SRGAP2-217ENST00000624873 SEL1L3Q68CR1 1132 aa10.27□□□□□ -0.77
SRGAP2-217ENST00000624873 B3GNT9Q6UX72 402 aa10.27□□□□□ -0.77
SRGAP2-217ENST00000624873 KRT78Q8N1N4 520 aa10.27□□□□□ -0.77
SRGAP2-217ENST00000624873 PYROXD2Q8N2H3 581 aa10.27□□□□□ -0.77
SRGAP2-217ENST00000624873 TRPV1Q8NER1 839 aa10.27□□□□□ -0.77
SRGAP2-217ENST00000624873 ASZ1Q8WWH4 475 aa10.27□□□□□ -0.77
SRGAP2-217ENST00000624873 MAGEB10Q96LZ2 347 aaPredicted RBP10.27□□□□□ -0.77
SRGAP2-217ENST00000624873 CEP295NLQ96MC4 621 aa10.27□□□□□ -0.77
SRGAP2-217ENST00000624873 KLHL32Q96NJ5 620 aa10.27□□□□□ -0.77
SRGAP2-217ENST00000624873 ZNF599Q96NL3 588 aa10.27□□□□□ -0.77
SRGAP2-217ENST00000624873 QKIQ96PU8 341 aaKnown RBP eCLIP10.27□□□□□ -0.772e-7■■■□□ 15.9
SRGAP2-217ENST00000624873 IL12RB2Q99665 862 aa10.27□□□□□ -0.77
SRGAP2-217ENST00000624873 CAPN10Q9HC96 672 aa10.27□□□□□ -0.77
SRGAP2-217ENST00000624873 POLG2Q9UHN1 485 aa10.27□□□□□ -0.77
SRGAP2-217ENST00000624873 PCDHGC4Q9Y5F7 938 aa10.27□□□□□ -0.77
SRGAP2-217ENST00000624873 H3BM21 787 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 LEFTY2O00292 366 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 PRMT5O14744 637 aaPredicted RBP10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 SLC31A1O15431 190 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 LMNAP02545 664 aaKnown RBP10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 ALPPL2P10696 532 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 ALADP13716 330 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 IL10P22301 178 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 SLC8A1P32418 973 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 KRT20P35900 424 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 KCNQ1P51787 676 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 DRG2P55039 364 aaKnown RBP10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 STX5Q13190 355 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 MAD2L1Q13257 205 aaPredicted RBP10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 NR6A1Q15406 480 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 GALNTL6Q49A17 601 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 N4BP2L1Q5TBK1 243 aaPredicted RBP10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 CRTC3Q6UUV7 619 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 ADAMTSL2Q86TH1 951 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 GALNT13Q8IUC8 556 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 METTL6Q8TCB7 284 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 PTCD2Q8WV60 388 aaKnown RBP10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 FBXO6Q9NRD1 293 aaPredicted RBP10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 ISM1B1AKI9 464 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 GCATO75600 419 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 LCA5LO95447 670 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 LTA4HP09960 611 aaKnown RBP10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 MLNP12872 115 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 HOXD13P35453 343 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 DSC2Q02487 901 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 CNGA3Q16281 694 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 RTP2Q5QGT7 225 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 RAVER1Q8IY67 606 aaKnown RBP10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 OR4K2Q8NGD2 314 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 CAVIN3Q969G5 261 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 PARVBQ9HBI1 364 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 WDR6Q9NNW5 1121 aaKnown RBP10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 MAN2B1O00754 1011 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 VIPP01282 170 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 RPA3P35244 121 aaPredicted RBP10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 DPYSL2Q16555 572 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 CMTM8Q8IZV2 173 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 SMARCD2Q92925 531 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 NKD2Q969F2 451 aaPredicted RBP10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 TTYH3Q9C0H2 523 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 GGA2Q9UJY4 613 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 PHTF1Q9UMS5 762 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 USP15Q9Y4E8 981 aaPredicted RBP10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 ENO3P13929 434 aaPredicted RBP10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 TYRP14679 529 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 HPGDP15428 266 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 HCAR3P49019 387 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 HADHBP55084 474 aaKnown RBP10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 NAA20P61599 178 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 LY6G5CQ5SRR4 150 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 HLA-DQA1Q5Y7H0 255 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 RPAINQ86UA6 219 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 PCDH20Q8N6Y1 951 aaKnown RBP10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 PLEKHO2Q8TD55 490 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 STYXQ8WUJ0 223 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 LRRN4Q8WUT4 740 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 WRAP53Q9BUR4 548 aaKnown RBP10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 UNKQ9C0B0 810 aaKnown RBP10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 GBA3Q9H227 469 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 PCDHB1Q9Y5F3 818 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 SNX10Q9Y5X0 201 aa10.26□□□□□ -0.77
SRGAP2-217ENST00000624873 URADA6NGE7 173 aa10.25□□□□□ -0.77
SRGAP2-217ENST00000624873 PTGESO14684 152 aa10.25□□□□□ -0.77
SRGAP2-217ENST00000624873 RPP40O75818 363 aaKnown RBP10.25□□□□□ -0.77
SRGAP2-217ENST00000624873 DEFB103AP81534 67 aa10.25□□□□□ -0.77
SRGAP2-217ENST00000624873 SLC39A11Q8N1S5 342 aa10.25□□□□□ -0.77
SRGAP2-217ENST00000624873 VPS50Q96JG6 964 aa10.25□□□□□ -0.77
SRGAP2-217ENST00000624873 CCDC138Q96M89 665 aa10.25□□□□□ -0.77
SRGAP2-217ENST00000624873 FERD3LQ96RJ6 166 aa10.25□□□□□ -0.77
SRGAP2-217ENST00000624873 EBF3Q9H4W6 596 aa10.25□□□□□ -0.77
SRGAP2-217ENST00000624873 PTPRHQ9HD43 1115 aa10.25□□□□□ -0.77
SRGAP2-217ENST00000624873 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.25□□□□□ -0.77
SRGAP2-217ENST00000624873 PNMA8BQ9ULN7 279 aaPredicted RBP10.25□□□□□ -0.77
SRGAP2-217ENST00000624873 MYH7P12883 1935 aa10.25□□□□□ -0.77
SRGAP2-217ENST00000624873 MYH6P13533 1939 aa10.25□□□□□ -0.77
SRGAP2-217ENST00000624873 EDDM13A0A1B0GTR0 161 aa10.25□□□□□ -0.77
SRGAP2-217ENST00000624873 PHGDHO43175 533 aaKnown RBP10.25□□□□□ -0.77
SRGAP2-217ENST00000624873 CNPP09543 421 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms