RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 PFDN2Q9UHV9 154 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 USP1O94782 785 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 IFNA6P05013 189 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 EIF2S3P41091 472 aaKnown RBP6.33□□□□□ -1.4
CDKL5-205ENST00000623535 PPP3R1P63098 170 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 MANEAQ5SRI9 462 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 CAMSAP1Q5T5Y3 1602 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 VITQ6UXI7 678 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 YTHDF3Q7Z739 585 aaKnown RBP6.33□□□□□ -1.4
CDKL5-205ENST00000623535 SLC13A5Q86YT5 568 aaPredicted RBP6.33□□□□□ -1.4
CDKL5-205ENST00000623535 PLA2G15Q8NCC3 412 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 TRNT1Q96Q11 434 aaKnown RBP6.33□□□□□ -1.4
CDKL5-205ENST00000623535 MYOCQ99972 504 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 NRDE2Q9H7Z3 1164 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 LYVE1Q9Y5Y7 322 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 BACE2Q9Y5Z0 518 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 A0A0A6YYK5 440 aaPredicted RBP6.33□□□□□ -1.4
CDKL5-205ENST00000623535 TRIM24O15164 1050 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 VAC14Q08AM6 782 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 SLC13A2Q13183 592 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 CLCA4Q14CN2 919 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 LARS2Q15031 903 aaKnown RBP6.33□□□□□ -1.4
CDKL5-205ENST00000623535 RESP18Q5W5W9 173 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 TMC3Q7Z5M5 1100 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 TTLQ8NG68 377 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 EME1Q96AY2 570 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 DDTLA6NHG4 134 aaPredicted RBP6.33□□□□□ -1.4
CDKL5-205ENST00000623535 PRKAB2O43741 272 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 CLCN3P51790 818 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 ELOCQ15369 112 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 SCARA3Q6AZY7 606 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 G2E3Q7L622 706 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 HDAC2Q92769 488 aaKnown RBP6.33□□□□□ -1.4
CDKL5-205ENST00000623535 TMEM117Q9H0C3 514 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 SRMSQ9H3Y6 488 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 PCDHB15Q9Y5E8 787 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 IRF6O14896 467 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 ABOP16442 354 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 FAUP35544 74 aaKnown RBP6.33□□□□□ -1.4
CDKL5-205ENST00000623535 ZNF200P98182 395 aaPredicted RBP6.33□□□□□ -1.4
CDKL5-205ENST00000623535 CREB5Q02930 508 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 PLGLAQ15195 96 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 UXS1Q8NBZ7 420 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 C1orf216Q8TAB5 229 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 ERLEC1Q96DZ1 483 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 SH3GL2Q99962 352 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 ANTXR1Q9H6X2 564 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 GPRC5BQ9NZH0 403 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 HMGXB4Q9UGU5 601 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 CNTFP26441 200 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 FXR2P51116 673 aaKnown RBP eCLIP6.33□□□□□ -1.4
CDKL5-205ENST00000623535 ALG10BQ5I7T1 473 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 RFFLQ8WZ73 363 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 LMLNQ96KR4 655 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 LACRTQ9GZZ8 138 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 BTBD1Q9H0C5 482 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 MAT2BQ9NZL9 334 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 GSTK1Q9Y2Q3 226 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 USP42Q9H9J4 1324 aaKnown RBP6.33□□□□□ -1.4
CDKL5-205ENST00000623535 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.33□□□□□ -1.4
CDKL5-205ENST00000623535 A0A1W2PQ45 241 aaPredicted RBP6.33□□□□□ -1.4
CDKL5-205ENST00000623535 A0A1W2PQY0 241 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 CIB4A0PJX0 185 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 H0Y858 1186 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 DHX15O43143 795 aaKnown RBP6.33□□□□□ -1.4
CDKL5-205ENST00000623535 FAM20BO75063 409 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 BLMHQ13867 455 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 POM121L1PQ3SYA9 428 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 ARHGAP40Q5TG30 622 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 DNM1P34Q6PK57 102 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 ZNF852Q6ZMS4 543 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 WDR49Q8IV35 697 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 GPALPP1Q8IXQ4 340 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 NANOS1Q8WY41 292 aaKnown RBP6.33□□□□□ -1.4
CDKL5-205ENST00000623535 Q96MT0 163 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 ACSS2Q9NR19 701 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 COQ3Q9NZJ6 369 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 TMEM9Q9P0T7 183 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 ADAMTS1Q9UHI8 967 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 KIF1CO43896 1103 aaKnown RBP6.33□□□□□ -1.4
CDKL5-205ENST00000623535 PDE5AO76074 875 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 GJB6O95452 261 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 INSRRP14616 1297 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 AFF1P51825 1210 aaKnown RBP6.33□□□□□ -1.4
CDKL5-205ENST00000623535 RPL6Q02878 288 aaKnown RBP6.33□□□□□ -1.4
CDKL5-205ENST00000623535 LAPTM5Q13571 262 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 SETD6Q8TBK2 473 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 ZDHHC12Q96GR4 267 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 ILKAPQ9H0C8 392 aaPredicted RBP6.33□□□□□ -1.4
CDKL5-205ENST00000623535 OSBPL2Q9H1P3 480 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 TMEM27Q9HBJ8 222 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 ARHGEF4Q9NR80 690 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 METTL5Q9NRN9 209 aaKnown RBP6.33□□□□□ -1.4
CDKL5-205ENST00000623535 KLQ9UEF7 1012 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 ZNF521Q96K83 1311 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 ARL5CA6NH57 179 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 SDR42E2A6NKP2 422 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 TNFAIP8O95379 198 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 GDI1P31150 447 aa6.33□□□□□ -1.4
CDKL5-205ENST00000623535 ZNF41P51814 821 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms