RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 PAFAH1B3Q15102 231 aaKnown RBP14.22□□□□□ -0.13
LDB3-209ENST00000623056 CYP2A13Q16696 494 aa14.22□□□□□ -0.13
LDB3-209ENST00000623056 ERO1BQ86YB8 467 aa14.22□□□□□ -0.13
LDB3-209ENST00000623056 SPPL2CQ8IUH8 684 aa14.22□□□□□ -0.13
LDB3-209ENST00000623056 MICALL2Q8IY33 904 aa14.22□□□□□ -0.13
LDB3-209ENST00000623056 COLGALT2Q8IYK4 626 aa14.22□□□□□ -0.13
LDB3-209ENST00000623056 ZUFSPQ96AP4 578 aa14.22□□□□□ -0.13
LDB3-209ENST00000623056 TEPSINQ96N21 525 aa14.22□□□□□ -0.13
LDB3-209ENST00000623056 C9orf16Q9BUW7 83 aa14.22□□□□□ -0.13
LDB3-209ENST00000623056 BRD8Q9H0E9 1235 aa14.22□□□□□ -0.13
LDB3-209ENST00000623056 MRPL46Q9H2W6 279 aaKnown RBP14.22□□□□□ -0.13
LDB3-209ENST00000623056 FAM124BQ9H5Z6 455 aaPredicted RBP14.22□□□□□ -0.13
LDB3-209ENST00000623056 CD320Q9NPF0 282 aa14.22□□□□□ -0.13
LDB3-209ENST00000623056 NSMCE4AQ9NXX6 385 aa14.22□□□□□ -0.13
LDB3-209ENST00000623056 OAZ3Q9UMX2 235 aa14.22□□□□□ -0.13
LDB3-209ENST00000623056 ERGIC3Q9Y282 383 aa14.22□□□□□ -0.13
LDB3-209ENST00000623056 SLC30A1Q9Y6M5 507 aa14.22□□□□□ -0.13
LDB3-209ENST00000623056 IQCA1LA6NCM1 817 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 GPC4O75487 556 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 DNAJB1P25685 340 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 CD68P34810 354 aaPredicted RBP14.21□□□□□ -0.13
LDB3-209ENST00000623056 NPY2RP49146 381 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 SULT1E1P49888 294 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 RAB10P61026 200 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 GRSF1Q12849 480 aaKnown RBP eCLIP14.21□□□□□ -0.13
LDB3-209ENST00000623056 Q3C1V9 767 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 GALNT18Q6P9A2 607 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 CHST15Q7LFX5 561 aaPredicted RBP14.21□□□□□ -0.13
LDB3-209ENST00000623056 MFSD6LQ8IWD5 586 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 C7orf31Q8N865 590 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 FAR2Q96K12 515 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 FAM32AQ9Y421 112 aaKnown RBP14.21□□□□□ -0.13
LDB3-209ENST00000623056 TCAF1Q9Y4C2 921 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 TLL2Q9Y6L7 1015 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 SYNJ2BP-COX16A0A087WUM0 186 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 AQP12BA6NM10 295 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 ACOX3O15254 700 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 DYNC1LI2O43237 492 aaPredicted RBP14.21□□□□□ -0.13
LDB3-209ENST00000623056 RASAL1O95294 804 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 STAU1O95793 577 aaKnown RBP14.21□□□□□ -0.13
LDB3-209ENST00000623056 CCNA2P20248 432 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 MATN1P21941 496 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 FASP25445 335 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 MAP4P27816 1152 aaKnown RBP14.21□□□□□ -0.13
LDB3-209ENST00000623056 YAP1P46937 504 aaKnown RBP14.21□□□□□ -0.13
LDB3-209ENST00000623056 TMED10P49755 219 aaKnown RBP14.21□□□□□ -0.13
LDB3-209ENST00000623056 CCT8P50990 548 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 CLCN3P51790 818 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 DNAJB13P59910 316 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 TNFAIP2Q03169 654 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 CD300CQ08708 224 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 ITGADQ13349 1161 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 INPP5AQ14642 412 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 PSMD5Q16401 504 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 SPRED1Q7Z699 444 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 NT5DC4Q86YG4 428 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 AQP12AQ8IXF9 295 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 CMTR2Q8IYT2 770 aaKnown RBP14.21□□□□□ -0.13
LDB3-209ENST00000623056 DNERQ8NFT8 737 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 CENPNQ96H22 339 aaPredicted RBP14.21□□□□□ -0.13
LDB3-209ENST00000623056 LRCH3Q96II8 777 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 CPB2Q96IY4 423 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 SLC45A3Q96JT2 553 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 TDRD1Q9BXT4 1180 aaKnown RBP14.21□□□□□ -0.13
LDB3-209ENST00000623056 TRIM15Q9C019 465 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 SNX25Q9H3E2 840 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 COX16Q9P0S2 106 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 TMED5Q9Y3A6 229 aa14.21□□□□□ -0.13
LDB3-209ENST00000623056 ERI2A8K979 691 aaKnown RBP14.2□□□□□ -0.14
LDB3-209ENST00000623056 NME4O00746 187 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 CYP2C8P10632 490 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 CYP2C9P11712 490 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 IL10P22301 178 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 SCNN1AP37088 669 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 CAPGP40121 348 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 EIF2B2P49770 351 aaKnown RBP14.2□□□□□ -0.14
LDB3-209ENST00000623056 PITX1P78337 314 aaPredicted RBP14.2□□□□□ -0.14
LDB3-209ENST00000623056 FAM219BQ5XKK7 198 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 RPS27LQ71UM5 84 aaKnown RBP14.2□□□□□ -0.14
LDB3-209ENST00000623056 RETREG3Q86VR2 466 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 DEFB106AQ8N104 65 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 OR13F1Q8NGS4 319 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 ROPN1LQ96C74 230 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 CNDP2Q96KP4 475 aaKnown RBP14.2□□□□□ -0.14
LDB3-209ENST00000623056 MRPL57Q9BQC6 102 aaKnown RBP14.2□□□□□ -0.14
LDB3-209ENST00000623056 TUBA1CQ9BQE3 449 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 HEPHQ9BQS7 1158 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 MTG1Q9BT17 334 aaPredicted RBP14.2□□□□□ -0.14
LDB3-209ENST00000623056 SEZ6LQ9BYH1 1024 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 GBA3Q9H227 469 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 DPEP3Q9H4B8 488 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 RIC8BQ9NVN3 520 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 KIAA1522Q9P206 1035 aaPredicted RBP14.2□□□□□ -0.14
LDB3-209ENST00000623056 EGFL7Q9UHF1 273 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 B3GNT3Q9Y2A9 372 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 MTF2Q9Y483 593 aaPredicted RBP14.2□□□□□ -0.14
LDB3-209ENST00000623056 FAM95CA0A1B0GW59 222 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 EEF2KO00418 725 aaKnown RBP14.2□□□□□ -0.14
LDB3-209ENST00000623056 EI24O14681 340 aa14.2□□□□□ -0.14
LDB3-209ENST00000623056 DCLK1O15075 740 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms