RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 CCDC126Q96EE4 140 aa16.47■□□□□ 0.23
LDB3-208ENST00000623007 MYEOVQ96EZ4 313 aa16.47■□□□□ 0.23
LDB3-208ENST00000623007 ZNF778Q96MU6 729 aa16.47■□□□□ 0.23
LDB3-208ENST00000623007 RASSF4Q9H2L5 321 aa16.47■□□□□ 0.23
LDB3-208ENST00000623007 NPHS2Q9NP85 383 aa16.47■□□□□ 0.23
LDB3-208ENST00000623007 SAR1AQ9NR31 198 aa16.47■□□□□ 0.23
LDB3-208ENST00000623007 KIAA1522Q9P206 1035 aaPredicted RBP16.47■□□□□ 0.23
LDB3-208ENST00000623007 ARHGAP26Q9UNA1 814 aa16.47■□□□□ 0.23
LDB3-208ENST00000623007 SORCS3Q9UPU3 1222 aa16.47■□□□□ 0.23
LDB3-208ENST00000623007 PTPRSQ13332 1948 aa16.47■□□□□ 0.23
LDB3-208ENST00000623007 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.46■□□□□ 0.23
LDB3-208ENST00000623007 FAM95CA0A1B0GW59 222 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 E2F8A0AVK6 867 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 C2orf81A6NN90 581 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 TLL1O43897 1013 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 RPP40O75818 363 aaKnown RBP16.46■□□□□ 0.23
LDB3-208ENST00000623007 HNRNPA1P09651 372 aaKnown RBP eCLIP16.46■□□□□ 0.23
LDB3-208ENST00000623007 PSMA3P25788 255 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 ARNTP27540 789 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 SLC1A2P43004 574 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 CHRNA4P43681 627 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 CSNK1DP48730 415 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 EPHA5P54756 1037 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 RPL26P61254 145 aaKnown RBP16.46■□□□□ 0.23
LDB3-208ENST00000623007 GRM3Q14832 879 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 TAF1AQ15573 450 aaPredicted RBP16.46■□□□□ 0.23
LDB3-208ENST00000623007 TBCCQ15814 346 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 KLC3Q6P597 504 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 UBE2Q1Q7Z7E8 422 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 CARNMT1Q8N4J0 409 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 TTC8Q8TAM2 541 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 SAMD11Q96NU1 681 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 TRIB3Q96RU7 358 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 TCF12Q99081 682 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 LRRC3Q9BY71 257 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 ATXN3LQ9H3M9 355 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 ABCF3Q9NUQ8 709 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 SMPD4Q9NXE4 827 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 VPS28Q9UK41 221 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 RPL26L1Q9UNX3 145 aaKnown RBP16.46■□□□□ 0.23
LDB3-208ENST00000623007 LDB2O43679 373 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 GREM1O60565 184 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 GLP2RO95838 553 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 RALBP11234 206 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 SERPINB5P36952 375 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 SCNN1BP51168 640 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 TMEM240Q5SV17 173 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 MBLAC2Q68D91 279 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 TXNDC8Q6A555 127 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 C16orf59Q7L2K0 433 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 TBC1D1Q86TI0 1168 aaPredicted RBP16.46■□□□□ 0.23
LDB3-208ENST00000623007 CILP2Q8IUL8 1156 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 MFN1Q8IWA4 741 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 MICALL1Q8N3F8 863 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 FITM2Q8N6M3 262 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 OR13J1Q8NGT2 312 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 PIWIL2Q8TC59 973 aaKnown RBP16.46■□□□□ 0.23
LDB3-208ENST00000623007 FEM1AQ9BSK4 669 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 POPDC3Q9HBV1 291 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 TLR9Q9NR96 1032 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 INTS10Q9NVR2 710 aaKnown RBP16.46■□□□□ 0.23
LDB3-208ENST00000623007 IL1RAPL1Q9NZN1 696 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 TMEM216Q9P0N5 145 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 SLC17A6Q9P2U8 582 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 EMCNQ9ULC0 261 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 CAPN7Q9Y6W3 813 aa16.46■□□□□ 0.23
LDB3-208ENST00000623007 DENND4CQ5VZ89 1909 aa16.46■□□□□ 0.22
LDB3-208ENST00000623007 CCDC189A1A4V9 331 aa16.45■□□□□ 0.22
LDB3-208ENST00000623007 C5orf67F2Z3F1 127 aa16.45■□□□□ 0.22
LDB3-208ENST00000623007 CCDC22O60826 627 aa16.45■□□□□ 0.22
LDB3-208ENST00000623007 TRIM13O60858 407 aa16.45■□□□□ 0.22
LDB3-208ENST00000623007 XYLBO75191 536 aa16.45■□□□□ 0.22
LDB3-208ENST00000623007 KLHL2O95198 593 aa16.45■□□□□ 0.22
LDB3-208ENST00000623007 DLDP09622 509 aaKnown RBP16.45■□□□□ 0.22
LDB3-208ENST00000623007 MYL4P12829 197 aa16.45■□□□□ 0.22
LDB3-208ENST00000623007 PTPN2P17706 415 aa16.45■□□□□ 0.22
LDB3-208ENST00000623007 CTNNB1P35222 781 aa16.45■□□□□ 0.22
LDB3-208ENST00000623007 LIG3P49916 1009 aa16.45■□□□□ 0.22
LDB3-208ENST00000623007 LBX1P52954 281 aa16.45■□□□□ 0.22
LDB3-208ENST00000623007 PCLAFQ15004 111 aa16.45■□□□□ 0.22
LDB3-208ENST00000623007 CYTH1Q15438 398 aa16.45■□□□□ 0.22
LDB3-208ENST00000623007 FAM83EQ2M2I3 478 aa16.45■□□□□ 0.22
LDB3-208ENST00000623007 FAM91A1Q658Y4 838 aa16.45■□□□□ 0.22
LDB3-208ENST00000623007 FAM45BPQ6NSW5 357 aa16.45■□□□□ 0.22
LDB3-208ENST00000623007 GAREM2Q75VX8 874 aa16.45■□□□□ 0.22
LDB3-208ENST00000623007 KDELC2Q7Z4H8 507 aa16.45■□□□□ 0.22
LDB3-208ENST00000623007 TDRD5Q8NAT2 981 aaKnown RBP16.45■□□□□ 0.22
LDB3-208ENST00000623007 FAM45AQ8TCE6 357 aa16.45■□□□□ 0.22
LDB3-208ENST00000623007 STON2Q8WXE9 905 aa16.45■□□□□ 0.22
LDB3-208ENST00000623007 BADQ92934 168 aa16.45■□□□□ 0.22
LDB3-208ENST00000623007 RMDN2Q96LZ7 410 aa16.45■□□□□ 0.22
LDB3-208ENST00000623007 TDRD1Q9BXT4 1180 aaKnown RBP16.45■□□□□ 0.22
LDB3-208ENST00000623007 NOD2Q9HC29 1040 aa16.45■□□□□ 0.22
LDB3-208ENST00000623007 NLE1Q9NVX2 485 aaPredicted RBP16.45■□□□□ 0.22
LDB3-208ENST00000623007 CENPFP49454 3210 aa16.45■□□□□ 0.22
LDB3-208ENST00000623007 C2orf71A6NGG8 1288 aa16.44■□□□□ 0.22
LDB3-208ENST00000623007 TSPAN3O60637 253 aa16.44■□□□□ 0.22
LDB3-208ENST00000623007 ZMPSTE24O75844 475 aa16.44■□□□□ 0.22
LDB3-208ENST00000623007 UBOX5O94941 541 aa16.44■□□□□ 0.22
LDB3-208ENST00000623007 UNC5CO95185 931 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms