RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 PSMD3O43242 534 aa20.01■□□□□ 0.79
PDLIM2-221ENST00000622702 RNASEH1O60930 286 aaKnown RBP20.01■□□□□ 0.79
PDLIM2-221ENST00000622702 LILRB5O75023 590 aa20.01■□□□□ 0.79
PDLIM2-221ENST00000622702 PIGNO95427 931 aa20.01■□□□□ 0.79
PDLIM2-221ENST00000622702 AP2A1O95782 977 aa20.01■□□□□ 0.79
PDLIM2-221ENST00000622702 CA4P22748 312 aa20.01■□□□□ 0.79
PDLIM2-221ENST00000622702 WNT3AP56704 352 aa20.01■□□□□ 0.79
PDLIM2-221ENST00000622702 BASP1P80723 227 aaKnown RBP20.01■□□□□ 0.79
PDLIM2-221ENST00000622702 TRAF2Q12933 501 aa20.01■□□□□ 0.79
PDLIM2-221ENST00000622702 CCDC70Q6NSX1 233 aa20.01■□□□□ 0.79
PDLIM2-221ENST00000622702 GDPD4Q6W3E5 623 aa20.01■□□□□ 0.79
PDLIM2-221ENST00000622702 RASSF3Q86WH2 238 aa20.01■□□□□ 0.79
PDLIM2-221ENST00000622702 CAMK1DQ8IU85 385 aa20.01■□□□□ 0.79
PDLIM2-221ENST00000622702 PGBD3Q8N328 593 aa20.01■□□□□ 0.79
PDLIM2-221ENST00000622702 PIP4K2CQ8TBX8 421 aa20.01■□□□□ 0.79
PDLIM2-221ENST00000622702 ECHDC3Q96DC8 303 aa20.01■□□□□ 0.79
PDLIM2-221ENST00000622702 PHOX2BQ99453 314 aa20.01■□□□□ 0.79
PDLIM2-221ENST00000622702 TPSD1Q9BZJ3 242 aa20.01■□□□□ 0.79
PDLIM2-221ENST00000622702 MKRN2Q9H000 416 aaKnown RBP20.01■□□□□ 0.79
PDLIM2-221ENST00000622702 SUV39H2Q9H5I1 410 aa20.01■□□□□ 0.79
PDLIM2-221ENST00000622702 SARDHQ9UL12 918 aa20.01■□□□□ 0.79
PDLIM2-221ENST00000622702 C1QTNF3-AMACRE9PGA6 284 aa20■□□□□ 0.79
PDLIM2-221ENST00000622702 DNALI1O14645 258 aaPredicted RBP20■□□□□ 0.79
PDLIM2-221ENST00000622702 PMPCBO75439 489 aa20■□□□□ 0.79
PDLIM2-221ENST00000622702 EPOP01588 193 aa20■□□□□ 0.79
PDLIM2-221ENST00000622702 UGT2B4P06133 528 aa20■□□□□ 0.79
PDLIM2-221ENST00000622702 SRSF5Q13243 272 aaKnown RBP20■□□□□ 0.79
PDLIM2-221ENST00000622702 FAM46CQ5VWP2 391 aa20■□□□□ 0.79
PDLIM2-221ENST00000622702 ZNF776Q68DI1 518 aaPredicted RBP20■□□□□ 0.79
PDLIM2-221ENST00000622702 MMAAQ8IVH4 418 aaKnown RBP20■□□□□ 0.79
PDLIM2-221ENST00000622702 PDCD7Q8N8D1 485 aaKnown RBP20■□□□□ 0.79
PDLIM2-221ENST00000622702 HCAR2Q8TDS4 363 aa20■□□□□ 0.79
PDLIM2-221ENST00000622702 SEC14L1Q92503 715 aa20■□□□□ 0.79
PDLIM2-221ENST00000622702 CPT1BQ92523 772 aa20■□□□□ 0.79
PDLIM2-221ENST00000622702 FEM1CQ96JP0 617 aa20■□□□□ 0.79
PDLIM2-221ENST00000622702 MRGPRX2Q96LB1 330 aa20■□□□□ 0.79
PDLIM2-221ENST00000622702 LRRC40Q9H9A6 602 aa20■□□□□ 0.79
PDLIM2-221ENST00000622702 DKK3Q9UBP4 350 aa20■□□□□ 0.79
PDLIM2-221ENST00000622702 EML5Q05BV3 1969 aa20■□□□□ 0.79
PDLIM2-221ENST00000622702 WDR87Q6ZQQ6 2873 aa20■□□□□ 0.79
PDLIM2-221ENST00000622702 A0A1W2PQ67 120 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 TSPAN11A1L157 253 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 BHMG1C9JSJ3 638 aaPredicted RBP19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 E7EVH7 732 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 HRO43593 1189 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 FZD6O60353 706 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 SUN1O94901 812 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 HEXIM1O94992 359 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 IL1BP01584 269 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 APRTP07741 180 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 GABRG2P18507 467 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 TPSB2P20231 275 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 ADRA1AP35348 466 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 DRG2P55039 364 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 RPS14P62263 151 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 CDK16Q00536 496 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 SLC7A5Q01650 507 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 CDK18Q07002 472 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 KCNJ11Q14654 390 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 TPSAB1Q15661 275 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 CST6Q15828 149 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 ZNF805Q5CZA5 627 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 PCGF5Q86SE9 256 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 TMPRSS6Q8IU80 811 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 IPMKQ8NFU5 416 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 SNF8Q96H20 258 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 TRIB3Q96RU7 358 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 DMGDHQ9UI17 866 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 TPX2Q9ULW0 747 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 ANKRD36A6QL64 1941 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 FRYLO94915 3013 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 LOC285095A0A1B0GVY8 99 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 NDC80O14777 642 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 SEC31AO94979 1220 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 PGLSO95336 258 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 ADH1BP00325 375 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 PRLP01236 227 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 CNR2P34972 360 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 RPL21P46778 160 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 RPL26P61254 145 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 ZBTB16Q05516 673 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 PCSK7Q16549 785 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 ARMC12Q5T9G4 340 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 RNASEH2BQ5TBB1 312 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 BRAT1Q6PJG6 821 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 PPIL6Q8IXY8 311 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 MRGPRX1Q96LB2 322 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 KLHL32Q96NJ5 620 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 TRIM31Q9BZY9 425 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 SLC6A17Q9H1V8 727 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 RPL26L1Q9UNX3 145 aaKnown RBP19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 SNX24Q9Y343 169 aa19.99■□□□□ 0.79
PDLIM2-221ENST00000622702 KPNA3O00505 521 aaPredicted RBP19.98■□□□□ 0.79
PDLIM2-221ENST00000622702 NDUFV2P19404 249 aa19.98■□□□□ 0.79
PDLIM2-221ENST00000622702 ITIH2P19823 946 aa19.98■□□□□ 0.79
PDLIM2-221ENST00000622702 C5AR1P21730 350 aa19.98■□□□□ 0.79
PDLIM2-221ENST00000622702 ITGB7P26010 798 aa19.98■□□□□ 0.79
PDLIM2-221ENST00000622702 SLC8A1P32418 973 aa19.98■□□□□ 0.79
PDLIM2-221ENST00000622702 PSMD8P48556 350 aa19.98■□□□□ 0.79
PDLIM2-221ENST00000622702 TEX35Q5T0J7 233 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms