RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 ATXN3LQ9H3M9 355 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 CYP4F11Q9HBI6 524 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 GMIPQ9P107 970 aa9.51□□□□□ -0.89
PDPN-212ENST00000621990 LOC285095A0A1B0GVY8 99 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 TRPC5OSA6NMA1 111 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 ZMPSTE24O75844 475 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 PENKP01210 267 aaPredicted RBP9.5□□□□□ -0.89
PDPN-212ENST00000621990 SP100P23497 879 aaPredicted RBP9.5□□□□□ -0.89
PDPN-212ENST00000621990 PAX7P23759 505 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 CCND3P30281 292 aaPredicted RBP9.5□□□□□ -0.89
PDPN-212ENST00000621990 GPR15P49685 360 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 ACVR1Q04771 509 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 CYLC2Q14093 348 aaPredicted RBP9.5□□□□□ -0.89
PDPN-212ENST00000621990 TRIP4Q15650 581 aaPredicted RBP9.5□□□□□ -0.89
PDPN-212ENST00000621990 DDR2Q16832 855 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 FAM83EQ2M2I3 478 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 ALFQ53S48 1182 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 ZNF789Q5FWF6 425 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 NOMO2Q5JPE7 1267 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 RBM20Q5T481 1227 aaKnown RBP9.5□□□□□ -0.89
PDPN-212ENST00000621990 TMEM154Q6P9G4 183 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 TRIM67Q6ZTA4 783 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 CHSY3Q70JA7 882 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 SNX32Q86XE0 403 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 PDSS2Q86YH6 399 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 ARRDC2Q8TBH0 407 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 PEX13Q92968 403 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 TSPAN17Q96FV3 270 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 MFSD1Q9H3U5 465 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 ACSS2Q9NR19 701 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 MRGBPQ9NV56 204 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 ADAMTS6Q9UKP5 1117 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 MAGEA13PA6NCF6 341 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 NEMP1O14524 444 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 PEX1O43933 1283 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 CNTN5O94779 1100 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 ATXN1LP0C7T5 689 aaKnown RBP9.5□□□□□ -0.89
PDPN-212ENST00000621990 CKBP12277 381 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 CD86P42081 329 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 SEPT6Q14141 434 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 MBTPS1Q14703 1052 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 PCSK7Q16549 785 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 PARP15Q460N3 678 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 PIGGQ5H8A4 983 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 PPM1LQ5SGD2 360 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 AGAP9Q5VTM2 703 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 DSELQ8IZU8 1212 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 SPATA6LQ8N4H0 392 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 SLC26A7Q8TE54 656 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 FAR2Q96K12 515 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 VCXQ9H320 206 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 POMKQ9H5K3 350 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 NT5MQ9NPB1 228 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 OLA1Q9NTK5 396 aaKnown RBP9.5□□□□□ -0.89
PDPN-212ENST00000621990 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.5□□□□□ -0.89
PDPN-212ENST00000621990 PCDHB5Q9Y5E4 795 aa9.5□□□□□ -0.89
PDPN-212ENST00000621990 SDHDO14521 159 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 NEBLO76041 1014 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 IPO13O94829 963 aaKnown RBP9.49□□□□□ -0.89
PDPN-212ENST00000621990 BAG2O95816 211 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 LTA4HP09960 611 aaKnown RBP9.49□□□□□ -0.89
PDPN-212ENST00000621990 PIM1P11309 404 aaPredicted RBP9.49□□□□□ -0.89
PDPN-212ENST00000621990 GRK4P32298 578 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 NUDT2P50583 147 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 SLC12A2P55011 1212 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 RPL26P61254 145 aaKnown RBP9.49□□□□□ -0.89
PDPN-212ENST00000621990 PRKCZQ05513 592 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 SULT2A1Q06520 285 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 IL10RBQ08334 325 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 ACAP2Q15057 778 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 PSMD5Q16401 504 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 ZNF423Q2M1K9 1284 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 SIRPB2Q5JXA9 342 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 TCHHL1Q5QJ38 904 aaPredicted RBP9.49□□□□□ -0.89
PDPN-212ENST00000621990 VARS2Q5ST30 1063 aaKnown RBP9.49□□□□□ -0.89
PDPN-212ENST00000621990 SDHAF4Q5VUM1 108 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 TFAP2DQ7Z6R9 452 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 PGAM4Q8N0Y7 254 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 PGBD5Q8N414 524 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 ATP6V0D2Q8N8Y2 350 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 IGSF8Q969P0 613 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 PSMG2Q969U7 264 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 CCDC124Q96CT7 223 aaKnown RBP9.49□□□□□ -0.89
PDPN-212ENST00000621990 SERPINI1Q99574 410 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.49□□□□□ -0.89
PDPN-212ENST00000621990 VCX3BQ9H321 246 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 SCOCQ9UIL1 159 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 ASB3Q9Y575 518 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 COPG1Q9Y678 874 aaKnown RBP9.49□□□□□ -0.89
PDPN-212ENST00000621990 A8MT66 165 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 LDB2O43679 373 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 RBP1P09455 135 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 ERFP50548 548 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 INHBCP55103 352 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 NFKB2Q00653 900 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 DSC2Q02487 901 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 RING1Q06587 406 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 SERINC3Q13530 473 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 MAP3K21Q5TCX8 1036 aa9.49□□□□□ -0.89
PDPN-212ENST00000621990 TMEM198Q66K66 360 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms