RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 GOLGA6L9A6NEM1 432 aa14.44□□□□□ -0.1
CBWD3-217ENST00000621474 TBC1D3FA6NER0 549 aaPredicted RBP14.44□□□□□ -0.1
CBWD3-217ENST00000621474 TBC1D3LB9A6J9 549 aa14.44□□□□□ -0.1
CBWD3-217ENST00000621474 AP1G1O43747 822 aa14.44□□□□□ -0.1
CBWD3-217ENST00000621474 KIF5CO60282 957 aa14.44□□□□□ -0.1
CBWD3-217ENST00000621474 SOCS5O75159 536 aa14.44□□□□□ -0.1
CBWD3-217ENST00000621474 PDHA1P08559 390 aa14.44□□□□□ -0.1
CBWD3-217ENST00000621474 TBC1D3HP0C7X1 549 aa14.44□□□□□ -0.1
CBWD3-217ENST00000621474 CREB5Q02930 508 aa14.44□□□□□ -0.1
CBWD3-217ENST00000621474 ITKQ08881 620 aa14.44□□□□□ -0.1
CBWD3-217ENST00000621474 CCDC6Q16204 474 aa14.44□□□□□ -0.1
CBWD3-217ENST00000621474 KIAA0895LQ68EN5 471 aa14.44□□□□□ -0.1
CBWD3-217ENST00000621474 TBC1D3GQ6DHY5 549 aa14.44□□□□□ -0.1
CBWD3-217ENST00000621474 TBC1D3CQ6IPX1 549 aa14.44□□□□□ -0.1
CBWD3-217ENST00000621474 BRAT1Q6PJG6 821 aa14.44□□□□□ -0.1
CBWD3-217ENST00000621474 ADAT2Q7Z6V5 191 aaKnown RBP14.44□□□□□ -0.1
CBWD3-217ENST00000621474 TTC7BQ86TV6 843 aa14.44□□□□□ -0.1
CBWD3-217ENST00000621474 PRPF39Q86UA1 669 aaKnown RBP14.44□□□□□ -0.1
CBWD3-217ENST00000621474 TBC1D3Q8IZP1 549 aaPredicted RBP14.44□□□□□ -0.1
CBWD3-217ENST00000621474 ZNF567Q8N184 647 aa14.44□□□□□ -0.1
CBWD3-217ENST00000621474 ATG4AQ8WYN0 398 aa14.44□□□□□ -0.1
CBWD3-217ENST00000621474 WDR24Q96S15 920 aa14.44□□□□□ -0.1
CBWD3-217ENST00000621474 TDRD1Q9BXT4 1180 aaKnown RBP14.44□□□□□ -0.1
CBWD3-217ENST00000621474 PREBQ9HCU5 417 aa14.44□□□□□ -0.1
CBWD3-217ENST00000621474 EIF2B4Q9UI10 523 aaKnown RBP14.44□□□□□ -0.1
CBWD3-217ENST00000621474 DNPEPQ9ULA0 475 aa14.44□□□□□ -0.1
CBWD3-217ENST00000621474 PCDHGA5Q9Y5G8 931 aa14.44□□□□□ -0.1
CBWD3-217ENST00000621474 DCHS1Q96JQ0 3298 aa14.44□□□□□ -0.1
CBWD3-217ENST00000621474 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.43□□□□□ -0.1
CBWD3-217ENST00000621474 LRRC72A6NJI9 287 aa14.43□□□□□ -0.1
CBWD3-217ENST00000621474 H7C0C1 242 aa14.43□□□□□ -0.1
CBWD3-217ENST00000621474 FSBPO95073 299 aa14.43□□□□□ -0.1
CBWD3-217ENST00000621474 PRLP01236 227 aa14.43□□□□□ -0.1
CBWD3-217ENST00000621474 PRKCGP05129 697 aa14.43□□□□□ -0.1
CBWD3-217ENST00000621474 MPLP40238 635 aa14.43□□□□□ -0.1
CBWD3-217ENST00000621474 ATP5OP48047 213 aa14.43□□□□□ -0.1
CBWD3-217ENST00000621474 GDF10P55107 478 aa14.43□□□□□ -0.1
CBWD3-217ENST00000621474 SKOR1P84550 965 aa14.43□□□□□ -0.1
CBWD3-217ENST00000621474 FGL2Q14314 439 aa14.43□□□□□ -0.1
CBWD3-217ENST00000621474 TMEM259Q4ZIN3 620 aa14.43□□□□□ -0.1
CBWD3-217ENST00000621474 SEL1L3Q68CR1 1132 aa14.43□□□□□ -0.1
CBWD3-217ENST00000621474 TRIM69Q86WT6 500 aa14.43□□□□□ -0.1
CBWD3-217ENST00000621474 TTC13Q8NBP0 860 aa14.43□□□□□ -0.1
CBWD3-217ENST00000621474 RUBCNQ92622 972 aa14.43□□□□□ -0.1
CBWD3-217ENST00000621474 RAB7BQ96AH8 199 aa14.43□□□□□ -0.1
CBWD3-217ENST00000621474 IMP4Q96G21 291 aaKnown RBP14.43□□□□□ -0.1
CBWD3-217ENST00000621474 GORASP1Q9BQQ3 440 aa14.43□□□□□ -0.1
CBWD3-217ENST00000621474 SMOC1Q9H4F8 434 aa14.43□□□□□ -0.1
CBWD3-217ENST00000621474 PARD6AQ9NPB6 346 aa14.43□□□□□ -0.1
CBWD3-217ENST00000621474 A0A1W2PPC4 97 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 MEI4A8MW99 385 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 UPK3BL1B0FP48 263 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 PATE3B3GLJ2 98 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 UPK3BL2E5RIL1 263 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 MTSS1O43312 755 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 GFRA3O60609 400 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 PGLSO95336 258 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 MT-CYBP00156 380 aaPredicted RBP14.42□□□□□ -0.1
CBWD3-217ENST00000621474 FGGP02679 453 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 MMP12P39900 470 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 CD86P42081 329 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 CCR5P51681 352 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 CCDC15Q0P6D6 951 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 OASLQ15646 514 aaKnown RBP14.42□□□□□ -0.1
CBWD3-217ENST00000621474 CYP2U1Q7Z449 544 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 SYT12Q8IV01 421 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 RASGEF1CQ8N431 466 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 SPATA22Q8NHS9 363 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 PIH1D2Q8WWB5 315 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 PIGKQ92643 395 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 FAM122AQ96E09 287 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 VAT1Q99536 393 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 GLOD4Q9HC38 313 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 PCDH12Q9NPG4 1184 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.42□□□□□ -0.1
CBWD3-217ENST00000621474 GMEB2Q9UKD1 530 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 PCDHB9Q9Y5E1 797 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 RAI2Q9Y5P3 530 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 TMEM131Q92545 1883 aa14.42□□□□□ -0.1
CBWD3-217ENST00000621474 A0A1W2PQU0 124 aa14.41□□□□□ -0.1
CBWD3-217ENST00000621474 RIOK3O14730 519 aaKnown RBP14.41□□□□□ -0.1
CBWD3-217ENST00000621474 WNT9AO14904 365 aa14.41□□□□□ -0.1
CBWD3-217ENST00000621474 LIASO43766 372 aa14.41□□□□□ -0.1
CBWD3-217ENST00000621474 RNGTTO60942 597 aaKnown RBP14.41□□□□□ -0.1
CBWD3-217ENST00000621474 SERPINF2P08697 491 aa14.41□□□□□ -0.1
CBWD3-217ENST00000621474 CES1P23141 567 aa14.41□□□□□ -0.1
CBWD3-217ENST00000621474 MAT2AP31153 395 aaKnown RBP14.41□□□□□ -0.1
CBWD3-217ENST00000621474 SEMG2Q02383 582 aa14.41□□□□□ -0.1
CBWD3-217ENST00000621474 SPEM2Q0P670 501 aa14.41□□□□□ -0.1
CBWD3-217ENST00000621474 PTPRRQ15256 657 aa14.41□□□□□ -0.1
CBWD3-217ENST00000621474 ZNF284Q2VY69 593 aa14.41□□□□□ -0.1
CBWD3-217ENST00000621474 NEK5Q6P3R8 708 aa14.41□□□□□ -0.1
CBWD3-217ENST00000621474 HORMAD1Q86X24 394 aa14.41□□□□□ -0.1
CBWD3-217ENST00000621474 CDKL3Q8IVW4 592 aaPredicted RBP14.41□□□□□ -0.1
CBWD3-217ENST00000621474 COG1Q8WTW3 980 aa14.41□□□□□ -0.1
CBWD3-217ENST00000621474 PDCD6IPQ8WUM4 868 aaKnown RBP14.41□□□□□ -0.1
CBWD3-217ENST00000621474 MS4A14Q96JA4 679 aa14.41□□□□□ -0.1
CBWD3-217ENST00000621474 SMIM14Q96QK8 99 aa14.41□□□□□ -0.1
CBWD3-217ENST00000621474 OSBPL9Q96SU4 736 aa14.41□□□□□ -0.1
CBWD3-217ENST00000621474 RBM15Q96T37 977 aaKnown RBP eCLIP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms