RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 CRYMQ14894 314 aa12.56□□□□□ -0.4
TNFAIP3-211ENST00000621150 SKIDA1Q1XH10 827 aa12.56□□□□□ -0.4
TNFAIP3-211ENST00000621150 SLC5A9Q2M3M2 681 aa12.56□□□□□ -0.4
TNFAIP3-211ENST00000621150 COX20Q5RI15 118 aa12.56□□□□□ -0.4
TNFAIP3-211ENST00000621150 TTC39BQ5VTQ0 682 aaPredicted RBP12.56□□□□□ -0.4
TNFAIP3-211ENST00000621150 NAPEPLDQ6IQ20 393 aa12.56□□□□□ -0.4
TNFAIP3-211ENST00000621150 RANBP10Q6VN20 620 aa12.56□□□□□ -0.4
TNFAIP3-211ENST00000621150 SETD3Q86TU7 594 aaPredicted RBP12.56□□□□□ -0.4
TNFAIP3-211ENST00000621150 SLC26A11Q86WA9 606 aa12.56□□□□□ -0.4
TNFAIP3-211ENST00000621150 NPAS3Q8IXF0 933 aa12.56□□□□□ -0.4
TNFAIP3-211ENST00000621150 MRPS31Q92665 395 aaKnown RBP12.56□□□□□ -0.4
TNFAIP3-211ENST00000621150 ATOH1Q92858 354 aaPredicted RBP12.56□□□□□ -0.4
TNFAIP3-211ENST00000621150 MRGPRX2Q96LB1 330 aa12.56□□□□□ -0.4
TNFAIP3-211ENST00000621150 CCDC134Q9H6E4 229 aa12.56□□□□□ -0.4
TNFAIP3-211ENST00000621150 ARNT2Q9HBZ2 717 aa12.56□□□□□ -0.4
TNFAIP3-211ENST00000621150 SSU72Q9NP77 194 aaKnown RBP12.56□□□□□ -0.4
TNFAIP3-211ENST00000621150 SLC2A4RGQ9NR83 387 aa12.56□□□□□ -0.4
TNFAIP3-211ENST00000621150 SMPD4Q9NXE4 827 aa12.56□□□□□ -0.4
TNFAIP3-211ENST00000621150 UBP1Q9NZI7 540 aa12.56□□□□□ -0.4
TNFAIP3-211ENST00000621150 CA14Q9ULX7 337 aa12.56□□□□□ -0.4
TNFAIP3-211ENST00000621150 MAD1L1Q9Y6D9 718 aa12.56□□□□□ -0.4
TNFAIP3-211ENST00000621150 COL4A3Q01955 1670 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 ZCWPW2A0A1B0GU75 182 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 TMEM120BA0PK00 339 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 AP3B1O00203 1094 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 MUSKO15146 869 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 PRPF4O43172 522 aaKnown RBP eCLIP12.55□□□□□ -0.46e-7■■■■□ 21.5
TNFAIP3-211ENST00000621150 TYROBPO43914 113 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 IRF1P10914 325 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 MSH2P43246 934 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 CDH17Q12864 832 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 MPP3Q13368 585 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 MARC1Q5VT66 337 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 TTC19Q6DKK2 380 aaPredicted RBP12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 POTEHQ6S545 545 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 HTR3DQ70Z44 454 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 MTSS1LQ765P7 747 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 MARK2Q7KZI7 788 aaKnown RBP12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 LINC00523Q86TU6 105 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 LRRC6Q86X45 466 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 OR7D4Q8NG98 312 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 SHKBP1Q8TBC3 707 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 DENND1AQ8TEH3 1009 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 ING5Q8WYH8 240 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 FCRL3Q96P31 734 aaPredicted RBP12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 DDX50Q9BQ39 737 aaKnown RBP12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 KIFC1Q9BW19 673 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 SLC46A2Q9BY10 475 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 IL22Q9GZX6 179 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 SP110Q9HB58 689 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 TRPC7Q9HCX4 862 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 VPS45Q9NRW7 570 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 BFARQ9NZS9 450 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 MRPS23Q9Y3D9 190 aaKnown RBP12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 OR51B4Q9Y5P0 310 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 FAM237BA0A1B0GVD1 139 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 A0A1W2PPM1 405 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 A0A1W2PRU2 124 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 HMX2A2RU54 273 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 KDELR3O43731 214 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 USP1O94782 785 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 BRAFP15056 766 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 SPANXN3Q5MJ09 141 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 CERCAMQ5T4B2 595 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 STXBP5Q5T5C0 1151 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 ARMC3Q5W041 872 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 ZNF783Q6ZMS7 281 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 SRRM1Q8IYB3 904 aaKnown RBP12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 UNC5BQ8IZJ1 945 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 CPXM2Q8N436 756 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 ALG14Q96F25 216 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 TBL1YQ9BQ87 522 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 CORO1BQ9BR76 489 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 PRR14Q9BWN1 585 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 TSPAN10Q9H1Z9 355 aaPredicted RBP12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 KIF9Q9HAQ2 790 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 ASAH2Q9NR71 780 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 ARHGEF3Q9NR81 526 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 SOX13Q9UN79 622 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 ARHGAP26Q9UNA1 814 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 FAM169AQ9Y6X4 670 aa12.55□□□□□ -0.4
TNFAIP3-211ENST00000621150 MAGEB16A2A368 324 aa12.54□□□□□ -0.4
TNFAIP3-211ENST00000621150 SOBPA7XYQ1 873 aa12.54□□□□□ -0.4
TNFAIP3-211ENST00000621150 UGT1A9O60656 530 aa12.54□□□□□ -0.4
TNFAIP3-211ENST00000621150 ZMPSTE24O75844 475 aa12.54□□□□□ -0.4
TNFAIP3-211ENST00000621150 CD160O95971 181 aa12.54□□□□□ -0.4
TNFAIP3-211ENST00000621150 GJA1P17302 382 aa12.54□□□□□ -0.4
TNFAIP3-211ENST00000621150 MZF1P28698 734 aaPredicted RBP12.54□□□□□ -0.4
TNFAIP3-211ENST00000621150 WNT3AP56704 352 aa12.54□□□□□ -0.4
TNFAIP3-211ENST00000621150 NAB1Q13506 487 aa12.54□□□□□ -0.4
TNFAIP3-211ENST00000621150 LBRQ14739 615 aaKnown RBP12.54□□□□□ -0.4
TNFAIP3-211ENST00000621150 ANKRD20A4Q4UJ75 823 aa12.54□□□□□ -0.4
TNFAIP3-211ENST00000621150 PRSS36Q5K4E3 855 aa12.54□□□□□ -0.4
TNFAIP3-211ENST00000621150 ATCAYQ86WG3 371 aa12.54□□□□□ -0.4
TNFAIP3-211ENST00000621150 MAB21L3Q8N8X9 362 aa12.54□□□□□ -0.4
TNFAIP3-211ENST00000621150 KXD1Q9BQD3 176 aa12.54□□□□□ -0.4
TNFAIP3-211ENST00000621150 SELENOSQ9BQE4 189 aa12.54□□□□□ -0.4
TNFAIP3-211ENST00000621150 APOL2Q9BQE5 337 aa12.54□□□□□ -0.4
TNFAIP3-211ENST00000621150 MGME1Q9BQP7 344 aa12.54□□□□□ -0.4
TNFAIP3-211ENST00000621150 ATXN3LQ9H3M9 355 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms