RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 CDC23Q9UJX2 597 aa5.39□□□□□ -1.55
VPS29-212ENST00000621131 ICKQ9UPZ9 632 aa5.39□□□□□ -1.55
VPS29-212ENST00000621131 USP42Q9H9J4 1324 aaKnown RBP5.39□□□□□ -1.55
VPS29-212ENST00000621131 LY75O60449 1722 aa5.39□□□□□ -1.55
VPS29-212ENST00000621131 TUBGCP6Q96RT7 1819 aa5.39□□□□□ -1.55
VPS29-212ENST00000621131 QSER1Q2KHR3 1735 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 TCRBV7S3A2A0A539 114 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 ANKRD18BA2A2Z9 1011 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 ACOT8O14734 319 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 NPHP1O15259 732 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 EPB41L2O43491 1005 aaKnown RBP5.38□□□□□ -1.55
VPS29-212ENST00000621131 CIAO1O76071 339 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 TNFRSF6BO95407 300 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 FGF3P11487 239 aaPredicted RBP5.38□□□□□ -1.55
VPS29-212ENST00000621131 HOXB9P17482 250 aaPredicted RBP5.38□□□□□ -1.55
VPS29-212ENST00000621131 CHRNB2P17787 502 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 KLRC2P26717 231 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 RCAN1P53805 252 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 DSCR9P59020 149 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 RNASELQ05823 741 aaKnown RBP5.38□□□□□ -1.55
VPS29-212ENST00000621131 CRYZQ08257 329 aaKnown RBP5.38□□□□□ -1.55
VPS29-212ENST00000621131 ITPK1Q13572 414 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 PKP1Q13835 747 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 GPR18Q14330 331 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 STARD3Q14849 445 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 NFATC4Q14934 902 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 GORABQ5T7V8 394 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 CLEC4GQ6UXB4 293 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 KIAA1324Q6UXG2 1013 aaKnown RBP5.38□□□□□ -1.55
VPS29-212ENST00000621131 ANKS1BQ7Z6G8 1248 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 IGFN1Q86VF2 1251 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 CCDC25Q86WR0 208 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 CAMK1DQ8IU85 385 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 FAM185AQ8N0U4 392 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 ENDOVQ8N8Q3 282 aaKnown RBP5.38□□□□□ -1.55
VPS29-212ENST00000621131 EVI5LQ96CN4 794 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 UTP14AQ9BVJ6 771 aaKnown RBP5.38□□□□□ -1.55
VPS29-212ENST00000621131 POLDIP3Q9BY77 421 aaKnown RBP5.38□□□□□ -1.55
VPS29-212ENST00000621131 NYXQ9GZU5 481 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 OBP2BQ9NPH6 170 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 ARL15Q9NXU5 204 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 NCKIPSDQ9NZQ3 722 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 ZNF112Q9UJU3 913 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 PA2G4Q9UQ80 394 aaKnown RBP5.38□□□□□ -1.55
VPS29-212ENST00000621131 SLC4A4Q9Y6R1 1079 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 SH3TC1Q8TE82 1336 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 RFX7Q2KHR2 1363 aa5.38□□□□□ -1.55
VPS29-212ENST00000621131 SPEF2Q9C093 1822 aa5.37□□□□□ -1.55
VPS29-212ENST00000621131 EYA2O00167 538 aa5.37□□□□□ -1.55
VPS29-212ENST00000621131 FFAR2O15552 330 aa5.37□□□□□ -1.55
VPS29-212ENST00000621131 HEXIM1O94992 359 aaKnown RBP5.37□□□□□ -1.55
VPS29-212ENST00000621131 HSP90AA1P07900 732 aaKnown RBP5.37□□□□□ -1.55
VPS29-212ENST00000621131 GYS1P13807 737 aa5.37□□□□□ -1.55
VPS29-212ENST00000621131 PRPH2P23942 346 aa5.37□□□□□ -1.55
VPS29-212ENST00000621131 GPTP24298 496 aa5.37□□□□□ -1.55
VPS29-212ENST00000621131 PCYT1AP49585 367 aa5.37□□□□□ -1.55
VPS29-212ENST00000621131 EIF5P55010 431 aaKnown RBP5.37□□□□□ -1.55
VPS29-212ENST00000621131 ZP1P60852 638 aa5.37□□□□□ -1.55
VPS29-212ENST00000621131 CCDC152Q4G0S7 254 aa5.37□□□□□ -1.55
VPS29-212ENST00000621131 FNBP1LQ5T0N5 605 aa5.37□□□□□ -1.55
VPS29-212ENST00000621131 CADM3Q8N126 398 aa5.37□□□□□ -1.55
VPS29-212ENST00000621131 CMASQ8NFW8 434 aaPredicted RBP5.37□□□□□ -1.55
VPS29-212ENST00000621131 OTUD7AQ8TE49 926 aaPredicted RBP5.37□□□□□ -1.55
VPS29-212ENST00000621131 FSD1Q9BTV5 496 aa5.37□□□□□ -1.55
VPS29-212ENST00000621131 HDHD5Q9BXW7 423 aa5.37□□□□□ -1.55
VPS29-212ENST00000621131 NLRC4Q9NPP4 1024 aa5.37□□□□□ -1.55
VPS29-212ENST00000621131 GPR108Q9NPR9 543 aa5.37□□□□□ -1.55
VPS29-212ENST00000621131 NIP7Q9Y221 180 aaKnown RBP eCLIP5.37□□□□□ -1.55
VPS29-212ENST00000621131 RAD50Q92878 1312 aa5.37□□□□□ -1.55
VPS29-212ENST00000621131 ABCC12Q96J65 1359 aa5.37□□□□□ -1.55
VPS29-212ENST00000621131 C4BP0C0L5 1744 aa5.37□□□□□ -1.55
VPS29-212ENST00000621131 LGALS16A8MUM7 142 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 EFCAB8A8MWE9 144 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 PRC1O43663 620 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 TOMM70O94826 608 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 ENTPD1P49961 510 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 TFCP2Q12800 502 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 TBRG1Q3YBR2 411 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 CCDC158Q5M9N0 1113 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 OTUD1Q5VV17 481 aaPredicted RBP5.36□□□□□ -1.55
VPS29-212ENST00000621131 NADSYN1Q6IA69 706 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 MTFR2Q6P444 385 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 TMEM71Q6P5X7 295 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 ZNF367Q7RTV3 350 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 TICAM2Q86XR7 235 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 ZNF34Q8IZ26 560 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 BICD2Q8TD16 824 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 NEUROD6Q96NK8 337 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 MPHOSPH8Q99549 860 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 ELAC2Q9BQ52 826 aaKnown RBP5.36□□□□□ -1.55
VPS29-212ENST00000621131 SEZ6LQ9BYH1 1024 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 HIPK3Q9H422 1215 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 PDE11AQ9HCR9 933 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 Q9N2J8 555 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 SLC22A11Q9NSA0 550 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 TMEM248Q9NWD8 314 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 ZDHHC7Q9NXF8 308 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 DAPP1Q9UN19 280 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 MROH5Q6ZUA9 1318 aa5.36□□□□□ -1.55
VPS29-212ENST00000621131 ZNF609O15014 1411 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms