RNA–Protein interactions for RNA: ENST00000620843.1

LPCAT3-213, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 5

Gene LPCAT3, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-213ENST00000620843 KIAA1456Q9P272 454 aa6.74□□□□□ -1.33
LPCAT3-213ENST00000620843 PLEKHB1Q9UF11 243 aaPredicted RBP6.74□□□□□ -1.33
LPCAT3-213ENST00000620843 FBXO2Q9UK22 296 aaPredicted RBP6.74□□□□□ -1.33
LPCAT3-213ENST00000620843 PCDHGB5Q9Y5G0 923 aa6.74□□□□□ -1.33
LPCAT3-213ENST00000620843 PIAS3Q9Y6X2 628 aa6.74□□□□□ -1.33
LPCAT3-213ENST00000620843 FAM157AC9JC47 383 aa6.73□□□□□ -1.33
LPCAT3-213ENST00000620843 ADAM10O14672 748 aa6.73□□□□□ -1.33
LPCAT3-213ENST00000620843 PRPF4O43172 522 aaKnown RBP eCLIP6.73□□□□□ -1.33
LPCAT3-213ENST00000620843 TGFB1I1O43294 461 aa6.73□□□□□ -1.33
LPCAT3-213ENST00000620843 ZBED4O75132 1171 aa6.73□□□□□ -1.33
LPCAT3-213ENST00000620843 POU1F1P28069 291 aa6.73□□□□□ -1.33
LPCAT3-213ENST00000620843 HOXD9P28356 352 aaPredicted RBP6.73□□□□□ -1.33
LPCAT3-213ENST00000620843 ICAM3P32942 547 aa6.73□□□□□ -1.33
LPCAT3-213ENST00000620843 EIF3BP55884 814 aaKnown RBP6.73□□□□□ -1.33
LPCAT3-213ENST00000620843 RPS3AP61247 264 aaKnown RBP6.73□□□□□ -1.33
LPCAT3-213ENST00000620843 PKP1Q13835 747 aa6.73□□□□□ -1.33
LPCAT3-213ENST00000620843 SMTNL2Q2TAL5 461 aa6.73□□□□□ -1.33
LPCAT3-213ENST00000620843 SERTAD4-AS1Q5TG53 156 aa6.73□□□□□ -1.33
LPCAT3-213ENST00000620843 SNX30Q5VWJ9 437 aa6.73□□□□□ -1.33
LPCAT3-213ENST00000620843 KDELC2Q7Z4H8 507 aa6.73□□□□□ -1.33
LPCAT3-213ENST00000620843 NGEFQ8N5V2 710 aa6.73□□□□□ -1.33
LPCAT3-213ENST00000620843 LRRC57Q8N9N7 239 aa6.73□□□□□ -1.33
LPCAT3-213ENST00000620843 ATOH1Q92858 354 aaPredicted RBP6.73□□□□□ -1.33
LPCAT3-213ENST00000620843 TMX4Q9H1E5 349 aaPredicted RBP6.73□□□□□ -1.33
LPCAT3-213ENST00000620843 THSD1Q9NS62 852 aa6.73□□□□□ -1.33
LPCAT3-213ENST00000620843 CTNNAL1Q9UBT7 734 aa6.73□□□□□ -1.33
LPCAT3-213ENST00000620843 KIF1AQ12756 1690 aa6.73□□□□□ -1.33
LPCAT3-213ENST00000620843 KCNU1A8MYU2 1149 aa6.72□□□□□ -1.33
LPCAT3-213ENST00000620843 RNMTO43148 476 aaKnown RBP6.72□□□□□ -1.33
LPCAT3-213ENST00000620843 SLC25A17O43808 307 aa6.72□□□□□ -1.33
LPCAT3-213ENST00000620843 SPARCP09486 303 aa6.72□□□□□ -1.33
LPCAT3-213ENST00000620843 YWHAZP63104 245 aaKnown RBP6.72□□□□□ -1.33
LPCAT3-213ENST00000620843 SLC18A2Q05940 514 aa6.72□□□□□ -1.33
LPCAT3-213ENST00000620843 TAF11Q15544 211 aa6.72□□□□□ -1.33
LPCAT3-213ENST00000620843 ITPRIPL1Q6GPH6 555 aa6.72□□□□□ -1.33
LPCAT3-213ENST00000620843 HMBOX1Q6NT76 420 aa6.72□□□□□ -1.33
LPCAT3-213ENST00000620843 SLC2A7Q6PXP3 512 aa6.72□□□□□ -1.33
LPCAT3-213ENST00000620843 PXKQ7Z7A4 578 aa6.72□□□□□ -1.33
LPCAT3-213ENST00000620843 GPAT4Q86UL3 456 aa6.72□□□□□ -1.33
LPCAT3-213ENST00000620843 OR4N2Q8NGD1 307 aa6.72□□□□□ -1.33
LPCAT3-213ENST00000620843 PRSS22Q9GZN4 317 aa6.72□□□□□ -1.33
LPCAT3-213ENST00000620843 PNRC2Q9NPJ4 139 aaKnown RBP6.72□□□□□ -1.33
LPCAT3-213ENST00000620843 SWAP70Q9UH65 585 aa6.72□□□□□ -1.33
LPCAT3-213ENST00000620843 RAP2CQ9Y3L5 183 aa6.72□□□□□ -1.33
LPCAT3-213ENST00000620843 LAS1LQ9Y4W2 734 aaKnown RBP6.72□□□□□ -1.33
LPCAT3-213ENST00000620843 PSAT1Q9Y617 370 aa6.72□□□□□ -1.33
LPCAT3-213ENST00000620843 FMN2Q9NZ56 1722 aa6.72□□□□□ -1.33
LPCAT3-213ENST00000620843 ADGRF5Q8IZF2 1346 aa6.72□□□□□ -1.33
LPCAT3-213ENST00000620843 PNPLA6Q8IY17 1366 aa6.71□□□□□ -1.33
LPCAT3-213ENST00000620843 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.71□□□□□ -1.34
LPCAT3-213ENST00000620843 FSD2A1L4K1 749 aa6.71□□□□□ -1.34
LPCAT3-213ENST00000620843 E5RJQ4 531 aa6.71□□□□□ -1.34
LPCAT3-213ENST00000620843 SCGB1D1O95968 90 aa6.71□□□□□ -1.34
LPCAT3-213ENST00000620843 CYP19A1P11511 503 aaPredicted RBP6.71□□□□□ -1.34
LPCAT3-213ENST00000620843 UNGP13051 313 aaPredicted RBP6.71□□□□□ -1.34
LPCAT3-213ENST00000620843 SLC2A4P14672 509 aa6.71□□□□□ -1.34
LPCAT3-213ENST00000620843 EDN2P20800 178 aa6.71□□□□□ -1.34
LPCAT3-213ENST00000620843 PSMA4P25789 261 aaKnown RBP6.71□□□□□ -1.34
LPCAT3-213ENST00000620843 GAD2Q05329 585 aa6.71□□□□□ -1.34
LPCAT3-213ENST00000620843 PIK3CD-AS1Q5SR53 167 aa6.71□□□□□ -1.34
LPCAT3-213ENST00000620843 C6orf10Q5SRN2 563 aa6.71□□□□□ -1.34
LPCAT3-213ENST00000620843 DEF8Q6ZN54 512 aa6.71□□□□□ -1.34
LPCAT3-213ENST00000620843 SLC46A3Q7Z3Q1 461 aa6.71□□□□□ -1.34
LPCAT3-213ENST00000620843 FAM185AQ8N0U4 392 aa6.71□□□□□ -1.34
LPCAT3-213ENST00000620843 SLC44A5Q8NCS7 719 aa6.71□□□□□ -1.34
LPCAT3-213ENST00000620843 CADM4Q8NFZ8 388 aa6.71□□□□□ -1.34
LPCAT3-213ENST00000620843 RASSF8Q8NHQ8 419 aa6.71□□□□□ -1.34
LPCAT3-213ENST00000620843 TMEM170AQ8WVE7 144 aa6.71□□□□□ -1.34
LPCAT3-213ENST00000620843 WDR83Q9BRX9 315 aaKnown RBP6.71□□□□□ -1.34
LPCAT3-213ENST00000620843 DIAPH3Q9NSV4 1193 aa6.71□□□□□ -1.34
LPCAT3-213ENST00000620843 RNF146Q9NTX7 359 aa6.71□□□□□ -1.34
LPCAT3-213ENST00000620843 PLCH1Q4KWH8 1693 aa6.71□□□□□ -1.34
LPCAT3-213ENST00000620843 USP32Q8NFA0 1604 aa6.7□□□□□ -1.34
LPCAT3-213ENST00000620843 CBY3A6NI87 242 aa6.7□□□□□ -1.34
LPCAT3-213ENST00000620843 KIF1CO43896 1103 aaKnown RBP6.7□□□□□ -1.34
LPCAT3-213ENST00000620843 TLR2O60603 784 aa6.7□□□□□ -1.34
LPCAT3-213ENST00000620843 BSGP35613 385 aa6.7□□□□□ -1.34
LPCAT3-213ENST00000620843 CPOXP36551 454 aa6.7□□□□□ -1.34
LPCAT3-213ENST00000620843 INHBEP58166 350 aa6.7□□□□□ -1.34
LPCAT3-213ENST00000620843 RPL7AP62424 266 aaKnown RBP6.7□□□□□ -1.34
LPCAT3-213ENST00000620843 VEPH1Q14D04 833 aa6.7□□□□□ -1.34
LPCAT3-213ENST00000620843 BRINP3Q76B58 766 aa6.7□□□□□ -1.34
LPCAT3-213ENST00000620843 SERPINA11Q86U17 422 aa6.7□□□□□ -1.34
LPCAT3-213ENST00000620843 ANKRD13BQ86YJ7 626 aa6.7□□□□□ -1.34
LPCAT3-213ENST00000620843 ADSSL1Q8N142 457 aa6.7□□□□□ -1.34
LPCAT3-213ENST00000620843 PERPQ96FX8 193 aa6.7□□□□□ -1.34
LPCAT3-213ENST00000620843 TREX2Q9BQ50 279 aaPredicted RBP6.7□□□□□ -1.34
LPCAT3-213ENST00000620843 ITPAQ9BY32 194 aa6.7□□□□□ -1.34
LPCAT3-213ENST00000620843 NUF2Q9BZD4 464 aa6.7□□□□□ -1.34
LPCAT3-213ENST00000620843 WDR6Q9NNW5 1121 aaKnown RBP6.7□□□□□ -1.34
LPCAT3-213ENST00000620843 MSRB1Q9NZV6 116 aa6.7□□□□□ -1.34
LPCAT3-213ENST00000620843 MYOM2P54296 1465 aa6.7□□□□□ -1.34
LPCAT3-213ENST00000620843 C1orf167Q5SNV9 1468 aa6.7□□□□□ -1.34
LPCAT3-213ENST00000620843 METP08581 1390 aa6.69□□□□□ -1.34
LPCAT3-213ENST00000620843 RRBP1Q9P2E9 1410 aaKnown RBP6.69□□□□□ -1.34
LPCAT3-213ENST00000620843 PXDNQ92626 1479 aa6.69□□□□□ -1.34
LPCAT3-213ENST00000620843 A0A0G2JK05 382 aa6.69□□□□□ -1.34
LPCAT3-213ENST00000620843 A0A1W2PPC1 479 aa6.69□□□□□ -1.34
LPCAT3-213ENST00000620843 ANKRD18BA2A2Z9 1011 aa6.69□□□□□ -1.34
LPCAT3-213ENST00000620843 A6NNC1 897 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms