RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	NUP93	Q8N1F7	819 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	CPSF7	Q8N684	471 aa	Known RBP	11.29	□□□□□ -0.6
TP53-223	ENST00000618944	FAM156A	Q8NDB6	213 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	IGSF8	Q969P0	613 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	HDAC10	Q969S8	669 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	IMP4	Q96G21	291 aa	Known RBP	11.29	□□□□□ -0.6
TP53-223	ENST00000618944	SP110	Q9HB58	689 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	SLC27A5	Q9Y2P5	690 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	CRYL1	Q9Y2S2	319 aa		11.29	□□□□□ -0.6
TP53-223	ENST00000618944	HEATR9	A2RTY3	570 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	SLCO1B7	G3V0H7	640 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	TXNDC9	O14530	226 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	SLC4A1	P02730	911 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	MRPS22	P82650	360 aa	Known RBP	11.28	□□□□□ -0.6
TP53-223	ENST00000618944	CEACAM7	Q14002	265 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	FAM83E	Q2M2I3	478 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	FOXB2	Q5VYV0	432 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	ISLR2	Q6UXK2	745 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	BNC2	Q6ZN30	1099 aa	Predicted RBP	11.28	□□□□□ -0.6
TP53-223	ENST00000618944	MON1A	Q86VX9	555 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	OR13J1	Q8NGT2	312 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	PTCD2	Q8WV60	388 aa	Known RBP	11.28	□□□□□ -0.6
TP53-223	ENST00000618944	PPP2R3C	Q969Q6	453 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	UROC1	Q96N76	676 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	NR1H4	Q96RI1	486 aa	Predicted RBP	11.28	□□□□□ -0.6
TP53-223	ENST00000618944	ZNF385D	Q9H6B1	395 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	WDR41	Q9HAD4	459 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	MRM3	Q9HC36	420 aa	Known RBP	11.28	□□□□□ -0.6
TP53-223	ENST00000618944	ZBTB26	Q9HCK0	441 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	CLIC5	Q9NZA1	410 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	STK39	Q9UEW8	545 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	PCDHB8	Q9UN66	801 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	TLR6	Q9Y2C9	796 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	SDHD	O14521	159 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	ADAMTS4	O75173	837 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	MMP2	P08253	660 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	PIRT	P0C851	137 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	VCL	P18206	1134 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	TYMP	P19971	482 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	KCNC1	P48547	511 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	POLD2	P49005	469 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	CDKN2D	P55273	166 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	SATB1	Q01826	763 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	HNRNPD	Q14103	355 aa	Known RBP	11.28	□□□□□ -0.6
TP53-223	ENST00000618944	GSTA3	Q16772	222 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	PPP1R3A	Q16821	1122 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	ZNF423	Q2M1K9	1284 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	HECTD2	Q5U5R9	776 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	TMEM207	Q6UWW9	146 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	GK5	Q6ZS86	529 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	ZNF598	Q86UK7	904 aa	Known RBP	11.28	□□□□□ -0.6
TP53-223	ENST00000618944	PIM3	Q86V86	326 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	LCA5	Q86VQ0	697 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	RYBP	Q8N488	228 aa	Predicted RBP	11.28	□□□□□ -0.6
TP53-223	ENST00000618944	PCDH20	Q8N6Y1	951 aa	Known RBP	11.28	□□□□□ -0.6
TP53-223	ENST00000618944	ZNF483	Q8TF39	744 aa	Predicted RBP	11.28	□□□□□ -0.6
TP53-223	ENST00000618944	C1orf74	Q96LT6	269 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	GCNA	Q96QF7	691 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	SERPINI1	Q99574	410 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	PRKD2	Q9BZL6	878 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	ZYG11B	Q9C0D3	744 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	ALG9	Q9H6U8	611 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	MARCH4	Q9P2E8	410 aa	Predicted RBP	11.28	□□□□□ -0.6
TP53-223	ENST00000618944	SCML2	Q9UQR0	700 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	SCN4A	P35499	1836 aa		11.28	□□□□□ -0.6
TP53-223	ENST00000618944	HTT	P42858	3142 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	CAPN8	A6NHC0	703 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944		A8MT66	165 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	SEPT4	O43236	478 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	NPHS1	O60500	1241 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	TADA2A	O75478	443 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	HDC	P19113	662 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	HTR7	P34969	479 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	C1QTNF8	P60827	252 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	SULT2A1	Q06520	285 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	FLOT2	Q14254	428 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	MMEL1	Q495T6	779 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	TECRL	Q5HYJ1	363 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	SIRPB2	Q5JXA9	342 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	GPR158	Q5T848	1215 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	THEMIS2	Q5TEJ8	643 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	AGAP9	Q5VTM2	703 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	FBXL22	Q6P050	247 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	GLB1L	Q6UWU2	654 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	PIWIL4	Q7Z3Z4	852 aa	Known RBP	11.27	□□□□□ -0.6
TP53-223	ENST00000618944	CCDC117	Q8IWD4	279 aa	Predicted RBP	11.27	□□□□□ -0.6
TP53-223	ENST00000618944	PGBD5	Q8N414	524 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	KLHDC9	Q8NEP7	349 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	PDCD6IP	Q8WUM4	868 aa	Known RBP	11.27	□□□□□ -0.6
TP53-223	ENST00000618944	EXT2	Q93063	718 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	MYEOV	Q96EZ4	313 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	SLC39A13	Q96H72	371 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	ZIC5	Q96T25	663 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	TSC22D3	Q99576	134 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	CCDC28B	Q9BUN5	200 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	ZCWPW1	Q9H0M4	648 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	EFCAB1	Q9HAE3	211 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	UXT	Q9UBK9	157 aa	Predicted RBP	11.27	□□□□□ -0.6
TP53-223	ENST00000618944	VWA7	Q9Y334	891 aa		11.27	□□□□□ -0.6
TP53-223	ENST00000618944	ATP6AP2	A0A1C7CYW4	349 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms