RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 KIF5AQ12840 1032 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 PRKD1Q15139 912 aaPredicted RBP8.33□□□□□ -1.08
NEK3-209ENST00000618856 SHBQ15464 509 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 KIF19Q2TAC6 998 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 SETMARQ53H47 684 aaPredicted RBP8.33□□□□□ -1.08
NEK3-209ENST00000618856 TFDP3Q5H9I0 405 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 SEL1L3Q68CR1 1132 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 BBS12Q6ZW61 710 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 ABI3BPQ7Z7G0 1075 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 DAAM2Q86T65 1068 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 PRPF39Q86UA1 669 aaKnown RBP8.33□□□□□ -1.08
NEK3-209ENST00000618856 TXLNBQ8N3L3 684 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 RYBPQ8N488 228 aaPredicted RBP8.33□□□□□ -1.08
NEK3-209ENST00000618856 MINDY1Q8N5J2 469 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 CNTD1Q8N815 330 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 ARRDC2Q8TBH0 407 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 FAM174AQ8TBP5 190 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 KIAA1524Q8TCG1 905 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 RNF25Q96BH1 459 aaPredicted RBP8.33□□□□□ -1.08
NEK3-209ENST00000618856 TADA1Q96BN2 335 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 CENPTQ96BT3 561 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 RBM41Q96IZ5 413 aaKnown RBP8.33□□□□□ -1.08
NEK3-209ENST00000618856 FEM1CQ96JP0 617 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 LGMNQ99538 433 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 HERPUD2Q9BSE4 406 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 DESI2Q9BSY9 194 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 SLC17A9Q9BYT1 436 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 MIR1-1HGQ9H1L0 117 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 ERVMER34-1Q9H9K5 563 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 TRIM10Q9UDY6 481 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 GGT7Q9UJ14 662 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 CDV3Q9UKY7 258 aaKnown RBP8.33□□□□□ -1.08
NEK3-209ENST00000618856 ANKRD6Q9Y2G4 727 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 PCDHGB2Q9Y5G2 931 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 HS3ST3A1Q9Y663 406 aa8.33□□□□□ -1.08
NEK3-209ENST00000618856 A0A1B0GVT2 93 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 GOLGA6L6A8MZA4 724 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 TLR4O00206 839 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 DDX3YO15523 660 aaKnown RBP8.32□□□□□ -1.08
NEK3-209ENST00000618856 DFNA5O60443 496 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 MMP2P08253 660 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 KRT10P13645 584 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 CD59P13987 128 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 CCNB1P14635 433 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 GM2AP17900 193 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 ITIH2P19823 946 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 CSRP1P21291 193 aaKnown RBP8.32□□□□□ -1.08
NEK3-209ENST00000618856 TGM2P21980 687 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 HNRNPA2B1P22626 353 aaKnown RBP8.32□□□□□ -1.08
NEK3-209ENST00000618856 MMP12P39900 470 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 RXRGP48443 463 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 SCNN1BP51168 640 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 BCL2L1Q07817 233 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 ELP6Q0PNE2 266 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 TRAF2Q12933 501 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 RALGDSQ12967 914 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 ZBTB17Q13105 803 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 TFDP2Q14188 446 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 ZNF235Q14590 738 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 PDK1Q15118 436 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 TEAD4Q15561 434 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 HLA-BQ31612 363 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 NPNTQ6UXI9 565 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 GCNT7Q6ZNI0 430 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 TTC7BQ86TV6 843 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 SPATS2Q86XZ4 545 aaKnown RBP8.32□□□□□ -1.08
NEK3-209ENST00000618856 CCDC13Q8IYE1 715 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 BBS5Q8N3I7 341 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 DENND6BQ8NEG7 585 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 ALG3Q92685 438 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 HES6Q96HZ4 224 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 SERAC1Q96JX3 654 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 BMFQ96LC9 184 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 MCCC1Q96RQ3 725 aaPredicted RBP8.32□□□□□ -1.08
NEK3-209ENST00000618856 MAK16Q9BXY0 300 aaKnown RBP8.32□□□□□ -1.08
NEK3-209ENST00000618856 POLR1EQ9GZS1 481 aaKnown RBP8.32□□□□□ -1.08
NEK3-209ENST00000618856 IL21RQ9HBE5 538 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 PCDH12Q9NPG4 1184 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 ITM2BQ9Y287 266 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.32□□□□□ -1.08
NEK3-209ENST00000618856 SNX11Q9Y5W9 270 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 CAPN6Q9Y6Q1 641 aa8.32□□□□□ -1.08
NEK3-209ENST00000618856 ADAMTS9Q9P2N4 1935 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 SPEGQ15772 3267 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 A0A1B0GTQ1 180 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 TTC24A2A3L6 582 aaPredicted RBP8.31□□□□□ -1.08
NEK3-209ENST00000618856 IGLON5A6NGN9 336 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 MIF4GDA9UHW6 222 aaKnown RBP8.31□□□□□ -1.08
NEK3-209ENST00000618856 APOC4-APOC2K7ER74 178 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 TOR1BO14657 336 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 PPP1R12AO14974 1030 aaPredicted RBP8.31□□□□□ -1.08
NEK3-209ENST00000618856 RAD51BO15315 384 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 PCDHGA12O60330 932 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 CST8O60676 142 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 CBFA2T3O75081 653 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 PCDH8O95206 1070 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 PGLSO95336 258 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 MAP3K6O95382 1288 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 PAK4O96013 591 aaPredicted RBP8.31□□□□□ -1.08
NEK3-209ENST00000618856 PRLP01236 227 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms