RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 USE1Q9NZ43 259 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 MYH11P35749 1972 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 SMIM22K7EJ46 135 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 HS6ST1O60243 411 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 PGLSO95336 258 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 MAP3K6O95382 1288 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 PIGNO95427 931 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 CALCAP01258 141 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 NTRK1P04629 796 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 RPL22P35268 128 aaKnown RBP7.44□□□□□ -1.22
PDE6A-205ENST00000617647 HNF1BP35680 557 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 SLC15A1P46059 708 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 HLCSP50747 726 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 ACTR2P61160 394 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 GPLD1P80108 840 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 BST2Q10589 180 aaKnown RBP7.44□□□□□ -1.22
PDE6A-205ENST00000617647 FUT2Q10981 343 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 ORC2Q13416 577 aaPredicted RBP7.44□□□□□ -1.22
PDE6A-205ENST00000617647 GRM4Q14833 912 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 RUNDC3AQ59EK9 446 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 TPRG1LQ5T0D9 272 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 GPATCH4Q5T3I0 446 aaKnown RBP7.44□□□□□ -1.22
PDE6A-205ENST00000617647 PPP1R26Q5T8A7 1209 aaPredicted RBP7.44□□□□□ -1.22
PDE6A-205ENST00000617647 RASAL3Q86YV0 1011 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 REM2Q8IYK8 340 aaPredicted RBP7.44□□□□□ -1.22
PDE6A-205ENST00000617647 EMC1Q8N766 993 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 CELF2-AS1Q8N7Q2 184 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 ZNF781Q8N8C0 355 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 TESCQ96BS2 214 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 MCEEQ96PE7 176 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 SLC4A9Q96Q91 983 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 DSN1Q9H410 356 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 TBC1D22BQ9NU19 505 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.44□□□□□ -1.22
PDE6A-205ENST00000617647 C14orf119Q9NWQ9 140 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 HOXC10Q9NYD6 342 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 GLTPQ9NZD2 209 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 TPRKBQ9Y3C4 175 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 CLUHO75153 1309 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 LMO7Q8WWI1 1683 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 C6orf229H3BNL8 230 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 DDX39AO00148 427 aaKnown RBP7.44□□□□□ -1.22
PDE6A-205ENST00000617647 EML1O00423 815 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 TRIM13O60858 407 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 ERBB2P04626 1255 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 PGK2P07205 417 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 ZNF26P17031 533 aaPredicted RBP7.44□□□□□ -1.22
PDE6A-205ENST00000617647 TNNI3P19429 210 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 GSTM2P28161 218 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 TRIM23P36406 574 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 GLRBP48167 497 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 LEPRP48357 1165 aaKnown RBP7.44□□□□□ -1.22
PDE6A-205ENST00000617647 TAS2R40P59535 323 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 PSMC5P62195 406 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 GALK2Q01415 458 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 MADCAM1Q13477 382 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 SIX1Q15475 284 aaPredicted RBP7.44□□□□□ -1.22
PDE6A-205ENST00000617647 AOC3Q16853 763 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 MTERF2Q49AM1 385 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 TMEM198Q66K66 360 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 LYPD8Q6UX82 237 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 R3HCC1LQ7Z5L2 792 aaKnown RBP7.44□□□□□ -1.22
PDE6A-205ENST00000617647 ZNF34Q8IZ26 560 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 DHX38Q92620 1227 aaKnown RBP7.44□□□□□ -1.22
PDE6A-205ENST00000617647 SGCDQ92629 289 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 CENPNQ96H22 339 aaPredicted RBP7.44□□□□□ -1.22
PDE6A-205ENST00000617647 OR52B2Q96RD2 323 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 CAMKK2Q96RR4 588 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 B3GNT4Q9C0J1 378 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 ROGDIQ9GZN7 287 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 FETUBQ9UGM5 382 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 ANAPC2Q9UJX6 822 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 RAD54BQ9Y620 910 aa7.44□□□□□ -1.22
PDE6A-205ENST00000617647 UBDO15205 165 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 SULT1B1O43704 296 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 NDST3O95803 873 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 PLATP00750 562 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 CSF1RP07333 972 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 MYF6P23409 242 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 CRHR1P34998 444 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 NUDT1P36639 197 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 BMPR1AP36894 532 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 RPL14P50914 215 aaKnown RBP7.43□□□□□ -1.22
PDE6A-205ENST00000617647 FPGSQ05932 587 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 POU5F1BQ06416 359 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 PCDH1Q08174 1060 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 NFIAQ12857 509 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 SELPLGQ14242 412 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 SQLEQ14534 574 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 ZNF284Q2VY69 593 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 RBM20Q5T481 1227 aaKnown RBP7.43□□□□□ -1.22
PDE6A-205ENST00000617647 SLX4IPQ5VYV7 408 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 ZNF767PQ75MW2 155 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 KIF18BQ86Y91 864 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 RELL1Q8IUW5 271 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 P3H2Q8IVL5 708 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 XXYLT1Q8NBI6 393 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 TFAP2CQ92754 450 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 ZNF285Q96NJ3 590 aa7.43□□□□□ -1.22
PDE6A-205ENST00000617647 GFM1Q96RP9 751 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms