RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 RLN3Q8WXF3 142 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 SLCO2A1Q92959 643 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 ECHDC3Q96DC8 303 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 MRGPRX2Q96LB1 330 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 CARD6Q9BX69 1037 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 TDRD1Q9BXT4 1180 aaKnown RBP15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 HDAC8Q9BY41 377 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 SERGEFQ9UGK8 458 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 FBXO4Q9UKT5 387 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 INVSQ9Y283 1065 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 AAR2Q9Y312 384 aaKnown RBP15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 CACNA1IQ9P0X4 2223 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 TSPAN11A1L157 253 aa15.74■□□□□ 0.11
PCDHGC3-204ENST00000617222 TTI1O43156 1089 aa15.74■□□□□ 0.11
PCDHGC3-204ENST00000617222 FZD6O60353 706 aa15.74■□□□□ 0.11
PCDHGC3-204ENST00000617222 ZNF217O75362 1048 aa15.74■□□□□ 0.11
PCDHGC3-204ENST00000617222 PRLP01236 227 aa15.74■□□□□ 0.11
PCDHGC3-204ENST00000617222 XPAP23025 273 aaPredicted RBP15.74■□□□□ 0.11
PCDHGC3-204ENST00000617222 P2RY2P41231 377 aa15.74■□□□□ 0.11
PCDHGC3-204ENST00000617222 NEK3P51956 506 aa15.74■□□□□ 0.11
PCDHGC3-204ENST00000617222 TERF1P54274 439 aa15.74■□□□□ 0.11
PCDHGC3-204ENST00000617222 CCDC15Q0P6D6 951 aa15.74■□□□□ 0.11
PCDHGC3-204ENST00000617222 DHX34Q14147 1143 aaKnown RBP15.74■□□□□ 0.11
PCDHGC3-204ENST00000617222 SPARCL1Q14515 664 aa15.74■□□□□ 0.11
PCDHGC3-204ENST00000617222 ANGPT1Q15389 498 aa15.74■□□□□ 0.11
PCDHGC3-204ENST00000617222 SYCP2LQ5T4T6 812 aa15.74■□□□□ 0.11
PCDHGC3-204ENST00000617222 FBXL19Q6PCT2 694 aa15.74■□□□□ 0.11
PCDHGC3-204ENST00000617222 BRAT1Q6PJG6 821 aa15.74■□□□□ 0.11
PCDHGC3-204ENST00000617222 USP30Q70CQ3 517 aa15.74■□□□□ 0.11
PCDHGC3-204ENST00000617222 JAMLQ86YT9 394 aa15.74■□□□□ 0.11
PCDHGC3-204ENST00000617222 PIH1D2Q8WWB5 315 aa15.74■□□□□ 0.11
PCDHGC3-204ENST00000617222 IFT43Q96FT9 208 aa15.74■□□□□ 0.11
PCDHGC3-204ENST00000617222 PPP1R2P1Q96PQ5 205 aa15.74■□□□□ 0.11
PCDHGC3-204ENST00000617222 USP36Q9P275 1121 aaKnown RBP15.74■□□□□ 0.11
PCDHGC3-204ENST00000617222 CYP8B1Q9UNU6 501 aa15.74■□□□□ 0.11
PCDHGC3-204ENST00000617222 MUC3AQ02505 3323 aa15.74■□□□□ 0.11
PCDHGC3-204ENST00000617222 CCDC163A0A0D9SF12 145 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 A0A1W2PQ67 120 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 GOLGA6CA6NDK9 693 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 GOLGA6BA6NDN3 693 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 E7EVH7 732 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 PSMD3O43242 534 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 GALR2O43603 387 aaPredicted RBP15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 CPP00450 1065 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 AGTP01019 485 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 PRKCGP05129 697 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 GOLGA6DP0CG33 693 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 SP9P0CG40 484 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 ADRB3P13945 408 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 ITIH2P19823 946 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 ADCY8P40145 1251 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 ABL2P42684 1182 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 LMAN1P49257 510 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 NUBP1P53384 320 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 EPHB1P54762 984 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 POLR2LP62875 67 aaKnown RBP15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 PTK6Q13882 451 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 UGP2Q16851 508 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 MAP7D1Q3KQU3 841 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 USP39Q53GS9 565 aaKnown RBP15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 LRRC73Q5JTD7 316 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 PIP5KL1Q5T9C9 394 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 AGBL4Q5VU57 503 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 CCDC70Q6NSX1 233 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 SYDE1Q6ZW31 735 aaPredicted RBP15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 MAATS1Q7Z4T9 603 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 KBTBD6Q86V97 674 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 WDR5BQ86VZ2 330 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 LONP2Q86WA8 852 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 SLC25A41Q8N5S1 370 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 FRMD1Q8N878 549 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 PDCD7Q8N8D1 485 aaKnown RBP15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 LPCAT1Q8NF37 534 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 OR14C36Q8NHC7 312 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 TRIB3Q96RU7 358 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 TRIM51Q9BSJ1 452 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 FICDQ9BVA6 458 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 L2HGDHQ9H9P8 463 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 GOLGA6AQ9NYA3 693 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 ASIC3Q9UHC3 531 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 PHTF1Q9UMS5 762 aa15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 ARIH1Q9Y4X5 557 aaPredicted RBP15.73■□□□□ 0.11
PCDHGC3-204ENST00000617222 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.72■□□□□ 0.11
PCDHGC3-204ENST00000617222 LOC285095A0A1B0GVY8 99 aa15.72■□□□□ 0.11
PCDHGC3-204ENST00000617222 UPK3BL1B0FP48 263 aa15.72■□□□□ 0.11
PCDHGC3-204ENST00000617222 UPK3BL2E5RIL1 263 aa15.72■□□□□ 0.11
PCDHGC3-204ENST00000617222 RAD51CO43502 376 aa15.72■□□□□ 0.11
PCDHGC3-204ENST00000617222 NDST3O95803 873 aa15.72■□□□□ 0.11
PCDHGC3-204ENST00000617222 EPOP01588 193 aa15.72■□□□□ 0.11
PCDHGC3-204ENST00000617222 CTPS1P17812 591 aa15.72■□□□□ 0.11
PCDHGC3-204ENST00000617222 OXTRP30559 389 aa15.72■□□□□ 0.11
PCDHGC3-204ENST00000617222 ADRA1AP35348 466 aa15.72■□□□□ 0.11
PCDHGC3-204ENST00000617222 TNNT3P45378 269 aaPredicted RBP15.72■□□□□ 0.11
PCDHGC3-204ENST00000617222 BASP1P80723 227 aaKnown RBP15.72■□□□□ 0.11
PCDHGC3-204ENST00000617222 OLIG2Q13516 323 aa15.72■□□□□ 0.11
PCDHGC3-204ENST00000617222 SEMA5AQ13591 1074 aa15.72■□□□□ 0.11
PCDHGC3-204ENST00000617222 GALNT3Q14435 633 aa15.72■□□□□ 0.11
PCDHGC3-204ENST00000617222 QPCTQ16769 361 aa15.72■□□□□ 0.11
PCDHGC3-204ENST00000617222 KCTD11Q693B1 232 aa15.72■□□□□ 0.11
PCDHGC3-204ENST00000617222 KLHDC8BQ8IXV7 354 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms