RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 GPATCH11Q8N954 259 aa15.84■□□□□ 0.13
NR1H3-235ENST00000616973 NXNL1Q96CM4 212 aa15.84■□□□□ 0.13
NR1H3-235ENST00000616973 PRICKLE1Q96MT3 831 aaPredicted RBP15.84■□□□□ 0.13
NR1H3-235ENST00000616973 PSKH2Q96QS6 385 aa15.84■□□□□ 0.13
NR1H3-235ENST00000616973 MRPL57Q9BQC6 102 aaKnown RBP15.84■□□□□ 0.13
NR1H3-235ENST00000616973 C1orf21Q9H246 121 aa15.84■□□□□ 0.13
NR1H3-235ENST00000616973 MRPL46Q9H2W6 279 aaKnown RBP15.84■□□□□ 0.13
NR1H3-235ENST00000616973 RAP2CQ9Y3L5 183 aa15.84■□□□□ 0.13
NR1H3-235ENST00000616973 DENND4CQ5VZ89 1909 aa15.83■□□□□ 0.13
NR1H3-235ENST00000616973 GBF1Q92538 1859 aa15.83■□□□□ 0.12
NR1H3-235ENST00000616973 KIAA1671Q9BY89 1806 aa15.83■□□□□ 0.12
NR1H3-235ENST00000616973 A0A0D9SEW6 157 aa15.83■□□□□ 0.12
NR1H3-235ENST00000616973 TTC24A2A3L6 582 aaPredicted RBP15.83■□□□□ 0.12
NR1H3-235ENST00000616973 PRR5-ARHGAP8B1AHC4 643 aa15.83■□□□□ 0.12
NR1H3-235ENST00000616973 B2RBV5 119 aa15.83■□□□□ 0.12
NR1H3-235ENST00000616973 SPECC1L-ADORA2AF8WAN1 911 aa15.83■□□□□ 0.12
NR1H3-235ENST00000616973 SNUPNO95149 360 aaKnown RBP15.83■□□□□ 0.12
NR1H3-235ENST00000616973 SERPINF2P08697 491 aa15.83■□□□□ 0.12
NR1H3-235ENST00000616973 RFC2P35250 354 aa15.83■□□□□ 0.12
NR1H3-235ENST00000616973 ALDH1A3P47895 512 aa15.83■□□□□ 0.12
NR1H3-235ENST00000616973 MNX1P50219 401 aaPredicted RBP15.83■□□□□ 0.12
NR1H3-235ENST00000616973 ARHGAP8P85298 464 aa15.83■□□□□ 0.12
NR1H3-235ENST00000616973 DLG1Q12959 904 aa15.83■□□□□ 0.12
NR1H3-235ENST00000616973 RCN2Q14257 317 aa15.83■□□□□ 0.12
NR1H3-235ENST00000616973 TRIM60Q495X7 471 aa15.83■□□□□ 0.12
NR1H3-235ENST00000616973 METTL21CQ5VZV1 264 aa15.83■□□□□ 0.12
NR1H3-235ENST00000616973 DENND1CQ8IV53 801 aa15.83■□□□□ 0.12
NR1H3-235ENST00000616973 SLC39A11Q8N1S5 342 aa15.83■□□□□ 0.12
NR1H3-235ENST00000616973 ZNF781Q8N8C0 355 aa15.83■□□□□ 0.12
NR1H3-235ENST00000616973 PDCD6IPQ8WUM4 868 aaKnown RBP15.83■□□□□ 0.12
NR1H3-235ENST00000616973 MCUR1Q96AQ8 359 aa15.83■□□□□ 0.12
NR1H3-235ENST00000616973 KLF16Q9BXK1 252 aaPredicted RBP15.83■□□□□ 0.12
NR1H3-235ENST00000616973 XPR1Q9UBH6 696 aa15.83■□□□□ 0.12
NR1H3-235ENST00000616973 UBA2Q9UBT2 640 aaPredicted RBP15.83■□□□□ 0.12
NR1H3-235ENST00000616973 TBX21Q9UL17 535 aa15.83■□□□□ 0.12
NR1H3-235ENST00000616973 YIPF1Q9Y548 306 aa15.83■□□□□ 0.12
NR1H3-235ENST00000616973 CEP350Q5VT06 3117 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.82■□□□□ 0.12
NR1H3-235ENST00000616973 AURKAO14965 403 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 MAGEC1O60732 1142 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 PEX11AO75192 247 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 KLKB1P03952 638 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 EZRP15311 586 aaKnown RBP15.82■□□□□ 0.12
NR1H3-235ENST00000616973 CES1P23141 567 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 CORO1AP31146 461 aaKnown RBP15.82■□□□□ 0.12
NR1H3-235ENST00000616973 GRIA4P48058 902 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 OXCT1P55809 520 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 RPS24P62847 133 aaKnown RBP15.82■□□□□ 0.12
NR1H3-235ENST00000616973 PRAMEP78395 509 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 ZNF460Q14592 562 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 RBM20Q5T481 1227 aaKnown RBP15.82■□□□□ 0.12
NR1H3-235ENST00000616973 ADGRF1Q5T601 910 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 IL31Q6EBC2 164 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 TDRD5Q8NAT2 981 aaKnown RBP15.82■□□□□ 0.12
NR1H3-235ENST00000616973 OR7D4Q8NG98 312 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 OR52K2Q8NGK3 314 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 GPR150Q8NGU9 434 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 CFAP61Q8NHU2 1237 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 BRSK1Q8TDC3 778 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 TOP1MTQ969P6 601 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 HDAC10Q969S8 669 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 ZNF689Q96CS4 500 aaPredicted RBP15.82■□□□□ 0.12
NR1H3-235ENST00000616973 VWCEQ96DN2 955 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 ZNF558Q96NG5 402 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 TRIB3Q96RU7 358 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 DDX50Q9BQ39 737 aaKnown RBP15.82■□□□□ 0.12
NR1H3-235ENST00000616973 DENND2DQ9H6A0 471 aaPredicted RBP15.82■□□□□ 0.12
NR1H3-235ENST00000616973 EBF2Q9HAK2 575 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 RNPEPL1Q9HAU8 725 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 CYP4F11Q9HBI6 524 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 IGSF5Q9NSI5 407 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 TBC1D30Q9Y2I9 924 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 A0A1B0GVM2 712 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 CARNS1A5YM72 827 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 TCAF2A6NFQ2 919 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 DLX3O60479 287 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 NDST3O95803 873 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 S1PR4O95977 384 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 LMNAP02545 664 aaKnown RBP15.82■□□□□ 0.12
NR1H3-235ENST00000616973 GLRBP48167 497 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 ARSDP51689 593 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 PGGT1BP53609 377 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 DNAJB13P59910 316 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 PRKAA1Q13131 559 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 RAB33AQ14088 237 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 UBAP2LQ14157 1087 aaKnown RBP15.82■□□□□ 0.12
NR1H3-235ENST00000616973 VEPH1Q14D04 833 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 DNAL1Q4LDG9 190 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 ZNF789Q5FWF6 425 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 ENDOVQ8N8Q3 282 aaKnown RBP15.82■□□□□ 0.12
NR1H3-235ENST00000616973 TTC8Q8TAM2 541 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 OLFM1Q99784 485 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 CRISPLD2Q9H0B8 497 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 COG4Q9H9E3 785 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.82■□□□□ 0.12
NR1H3-235ENST00000616973 STOML2Q9UJZ1 356 aa15.82■□□□□ 0.12
NR1H3-235ENST00000616973 CORO1CQ9ULV4 474 aaPredicted RBP15.82■□□□□ 0.12
NR1H3-235ENST00000616973 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.82■□□□□ 0.12
NR1H3-235ENST00000616973 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.81■□□□□ 0.12
NR1H3-235ENST00000616973 ABHD14A-ACY1A0A1B0GW23 586 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms