RNA–Protein interactions for RNA: ENST00000616824.1

FAM220A-206, Transcript of family with sequence similarity 220 member A, humanhuman

TSL 1 (best) BASIC

Gene FAM220A, Length 2,211 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM220A-206ENST00000616824 CCDC162PA2VCL2 907 aa24.71■■□□□ 1.55
FAM220A-206ENST00000616824 H2AFYO75367 372 aaKnown RBP24.71■■□□□ 1.55
FAM220A-206ENST00000616824 HSPA4LO95757 839 aa24.71■■□□□ 1.55
FAM220A-206ENST00000616824 TGM2P21980 687 aa24.71■■□□□ 1.55
FAM220A-206ENST00000616824 BDNFP23560 247 aa24.71■■□□□ 1.55
FAM220A-206ENST00000616824 ITGB8P26012 769 aa24.71■■□□□ 1.55
FAM220A-206ENST00000616824 ACADSBP45954 432 aa24.71■■□□□ 1.55
FAM220A-206ENST00000616824 CCR3P51677 355 aa24.71■■□□□ 1.55
FAM220A-206ENST00000616824 YWHAHQ04917 246 aaPredicted RBP24.71■■□□□ 1.55
FAM220A-206ENST00000616824 ZNF534Q76KX8 674 aa24.71■■□□□ 1.55
FAM220A-206ENST00000616824 GPRIN1Q7Z2K8 1008 aa24.71■■□□□ 1.55
FAM220A-206ENST00000616824 CLVS1Q8IUQ0 354 aaPredicted RBP24.71■■□□□ 1.55
FAM220A-206ENST00000616824 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.71■■□□□ 1.55
FAM220A-206ENST00000616824 SREK1Q8WXA9 508 aaKnown RBP24.71■■□□□ 1.55
FAM220A-206ENST00000616824 TOP1MTQ969P6 601 aa24.71■■□□□ 1.55
FAM220A-206ENST00000616824 VWCEQ96DN2 955 aa24.71■■□□□ 1.55
FAM220A-206ENST00000616824 COQ10BQ9H8M1 238 aa24.71■■□□□ 1.55
FAM220A-206ENST00000616824 MRPL40Q9NQ50 206 aaKnown RBP24.71■■□□□ 1.55
FAM220A-206ENST00000616824 TTKP33981 857 aa24.71■■□□□ 1.55
FAM220A-206ENST00000616824 SLC5A3P53794 718 aa24.71■■□□□ 1.55
FAM220A-206ENST00000616824 NIPAL4Q0D2K0 466 aa24.71■■□□□ 1.55
FAM220A-206ENST00000616824 C1orf53Q5VUE5 145 aa24.71■■□□□ 1.55
FAM220A-206ENST00000616824 THEM5Q8N1Q8 247 aa24.71■■□□□ 1.55
FAM220A-206ENST00000616824 C12orf43Q96C57 262 aaKnown RBP24.71■■□□□ 1.55
FAM220A-206ENST00000616824 PEBP4Q96S96 227 aa24.71■■□□□ 1.55
FAM220A-206ENST00000616824 PAIP1Q9H074 479 aaKnown RBP24.71■■□□□ 1.55
FAM220A-206ENST00000616824 C11orf49Q9H6J7 331 aa24.71■■□□□ 1.55
FAM220A-206ENST00000616824 WDR41Q9HAD4 459 aa24.71■■□□□ 1.55
FAM220A-206ENST00000616824 LRRC4Q9HBW1 653 aa24.71■■□□□ 1.55
FAM220A-206ENST00000616824 NGRNQ9NPE2 291 aaKnown RBP24.71■■□□□ 1.55
FAM220A-206ENST00000616824 PRDM5Q9NQX1 630 aaPredicted RBP24.71■■□□□ 1.55
FAM220A-206ENST00000616824 MAN1C1Q9NR34 630 aa24.71■■□□□ 1.55
FAM220A-206ENST00000616824 IPO11Q9UI26 975 aaKnown RBP24.71■■□□□ 1.55
FAM220A-206ENST00000616824 PCDHB8Q9UN66 801 aa24.71■■□□□ 1.55
FAM220A-206ENST00000616824 TTC3P53804 2025 aa24.71■■□□□ 1.55
FAM220A-206ENST00000616824 ESRRBO95718 433 aa24.7■■□□□ 1.55
FAM220A-206ENST00000616824 CLTBP09497 229 aa24.7■■□□□ 1.55
FAM220A-206ENST00000616824 CDH6P55285 790 aa24.7■■□□□ 1.55
FAM220A-206ENST00000616824 C21orf59P57076 290 aa24.7■■□□□ 1.55
FAM220A-206ENST00000616824 NIPAL1Q6NVV3 410 aa24.7■■□□□ 1.55
FAM220A-206ENST00000616824 SCYL2Q6P3W7 929 aa24.7■■□□□ 1.55
FAM220A-206ENST00000616824 FAM171BQ6P995 826 aa24.7■■□□□ 1.55
FAM220A-206ENST00000616824 TMCO2Q7Z6W1 182 aaPredicted RBP24.7■■□□□ 1.55
FAM220A-206ENST00000616824 ZDHHC17Q8IUH5 632 aa24.7■■□□□ 1.55
FAM220A-206ENST00000616824 PLEKHA8Q96JA3 519 aa24.7■■□□□ 1.55
FAM220A-206ENST00000616824 RNF157Q96PX1 679 aa24.7■■□□□ 1.55
FAM220A-206ENST00000616824 CCDC68Q9H2F9 335 aa24.7■■□□□ 1.55
FAM220A-206ENST00000616824 EFCAB1Q9HAE3 211 aa24.7■■□□□ 1.55
FAM220A-206ENST00000616824 COL6A2P12110 1019 aa24.7■■□□□ 1.54
FAM220A-206ENST00000616824 SDC4P31431 198 aa24.7■■□□□ 1.54
FAM220A-206ENST00000616824 TKTL1P51854 596 aa24.7■■□□□ 1.54
FAM220A-206ENST00000616824 MMRN1Q13201 1228 aa24.7■■□□□ 1.54
FAM220A-206ENST00000616824 NPAS4Q8IUM7 802 aa24.7■■□□□ 1.54
FAM220A-206ENST00000616824 ZNF781Q8N8C0 355 aa24.7■■□□□ 1.54
FAM220A-206ENST00000616824 CHPT1Q8WUD6 406 aa24.7■■□□□ 1.54
FAM220A-206ENST00000616824 FAM149B1Q96BN6 582 aa24.7■■□□□ 1.54
FAM220A-206ENST00000616824 THAP11Q96EK4 314 aa24.7■■□□□ 1.54
FAM220A-206ENST00000616824 PRDM16Q9HAZ2 1276 aa24.7■■□□□ 1.54
FAM220A-206ENST00000616824 EBF1Q9UH73 591 aa24.7■■□□□ 1.54
FAM220A-206ENST00000616824 AP4S1Q9Y587 144 aa24.7■■□□□ 1.54
FAM220A-206ENST00000616824 PSMD12O00232 456 aaPredicted RBP24.69■■□□□ 1.54
FAM220A-206ENST00000616824 RBL1P28749 1068 aa24.69■■□□□ 1.54
FAM220A-206ENST00000616824 SLC11A1P49279 550 aa24.69■■□□□ 1.54
FAM220A-206ENST00000616824 ATXN1P54253 815 aaKnown RBP24.69■■□□□ 1.54
FAM220A-206ENST00000616824 NRF1Q16656 503 aa24.69■■□□□ 1.54
FAM220A-206ENST00000616824 ANKDD1AQ495B1 522 aa24.69■■□□□ 1.54
FAM220A-206ENST00000616824 TMEM53Q6P2H8 277 aa24.69■■□□□ 1.54
FAM220A-206ENST00000616824 SLC26A9Q7LBE3 791 aa24.69■■□□□ 1.54
FAM220A-206ENST00000616824 FIBCD1Q8N539 461 aa24.69■■□□□ 1.54
FAM220A-206ENST00000616824 PLD5Q8N7P1 536 aa24.69■■□□□ 1.54
FAM220A-206ENST00000616824 OR52B2Q96RD2 323 aa24.69■■□□□ 1.54
FAM220A-206ENST00000616824 PKMYT1Q99640 499 aa24.69■■□□□ 1.54
FAM220A-206ENST00000616824 GPR62Q9BZJ7 368 aa24.69■■□□□ 1.54
FAM220A-206ENST00000616824 TMEM216Q9P0N5 145 aa24.69■■□□□ 1.54
FAM220A-206ENST00000616824 TRIM38O00635 465 aa24.69■■□□□ 1.54
FAM220A-206ENST00000616824 TYMPP19971 482 aa24.69■■□□□ 1.54
FAM220A-206ENST00000616824 PKNOX1P55347 436 aa24.69■■□□□ 1.54
FAM220A-206ENST00000616824 KCNC4Q03721 635 aa24.69■■□□□ 1.54
FAM220A-206ENST00000616824 ART3Q13508 389 aa24.69■■□□□ 1.54
FAM220A-206ENST00000616824 SIX6OS1Q8N1H7 587 aa24.69■■□□□ 1.54
FAM220A-206ENST00000616824 MPP5Q8N3R9 675 aa24.69■■□□□ 1.54
FAM220A-206ENST00000616824 RCN3Q96D15 328 aa24.69■■□□□ 1.54
FAM220A-206ENST00000616824 DOK1Q99704 481 aa24.69■■□□□ 1.54
FAM220A-206ENST00000616824 GNPTGQ9UJJ9 305 aa24.69■■□□□ 1.54
FAM220A-206ENST00000616824 SLC10A2Q12908 348 aaPredicted RBP24.68■■□□□ 1.54
FAM220A-206ENST00000616824 BCL2A1Q16548 175 aa24.68■■□□□ 1.54
FAM220A-206ENST00000616824 FAM171A1Q5VUB5 890 aa24.68■■□□□ 1.54
FAM220A-206ENST00000616824 TMEM173Q86WV6 379 aaPredicted RBP24.68■■□□□ 1.54
FAM220A-206ENST00000616824 CNTD1Q8N815 330 aa24.68■■□□□ 1.54
FAM220A-206ENST00000616824 TDRD5Q8NAT2 981 aaKnown RBP24.68■■□□□ 1.54
FAM220A-206ENST00000616824 MAPK15Q8TD08 544 aa24.68■■□□□ 1.54
FAM220A-206ENST00000616824 ASB9Q96DX5 294 aa24.68■■□□□ 1.54
FAM220A-206ENST00000616824 SMARCD1Q96GM5 515 aa24.68■■□□□ 1.54
FAM220A-206ENST00000616824 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.68■■□□□ 1.54
FAM220A-206ENST00000616824 SPATA7Q9P0W8 599 aa24.68■■□□□ 1.54
FAM220A-206ENST00000616824 ADAM28Q9UKQ2 775 aa24.68■■□□□ 1.54
FAM220A-206ENST00000616824 CFLARO15519 480 aa24.67■■□□□ 1.54
FAM220A-206ENST00000616824 INHBBP09529 407 aa24.67■■□□□ 1.54
FAM220A-206ENST00000616824 IL23RQ5VWK5 629 aa24.67■■□□□ 1.54
FAM220A-206ENST00000616824 HFE2Q6ZVN8 426 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms