RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 IL2P60568 153 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 NR6A1Q15406 480 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 UPP1Q16831 310 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 UBXN11Q5T124 520 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 SPATA31D4Q6ZUB0 917 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 LRRC43Q8N309 656 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 ACOX2Q99424 681 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 C2orf49Q9BVC5 232 aaPredicted RBP13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 CXCL16Q9H2A7 254 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 DENND2DQ9H6A0 471 aaPredicted RBP13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 MRPL17Q9NRX2 175 aaKnown RBP13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 ZNF831Q5JPB2 1677 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 TAF1LQ8IZX4 1826 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 GPR15P49685 360 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 TAS2R39P59534 338 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 PARP15Q460N3 678 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 STXBP5Q5T5C0 1151 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 SMYD5Q6GMV2 418 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 FCRL5Q96RD9 977 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 EBF4Q9BQW3 602 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 KLHL4Q9C0H6 718 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 ARHGEF3Q9NR81 526 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 TMEM161AQ9NX61 479 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 CROTQ9UKG9 612 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 PSAT1Q9Y617 370 aa13.29□□□□□ -0.28
PPP4R3B-206ENST00000616407 RGSL1A5PLK6 1076 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 ESRRBO95718 433 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 AMHP03971 560 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 GSCP56915 257 aaPredicted RBP13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 DDX39BQ13838 428 aaKnown RBP13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 TP53INP2Q8IXH6 220 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 METTL6Q8TCB7 284 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 WDR41Q9HAD4 459 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 SLC25A13Q9UJS0 675 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 CDK5RAP2Q96SN8 1893 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 MAGEA13PA6NCF6 341 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 ZNF487B1APH4 448 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 CCNT2O60583 730 aaKnown RBP13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 CHRNA1P02708 482 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 MLLT6P55198 1093 aaPredicted RBP13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 TRIM32Q13049 653 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 MORN1Q5T089 497 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 RINLQ6ZS11 566 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 GPSM1Q86YR5 675 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 ZNF781Q8N8C0 355 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 SCLYQ96I15 445 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 FOPNLQ96NB1 174 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 THUMPD3Q9BV44 507 aaKnown RBP13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 PLK2Q9NYY3 685 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 SIN3BO75182 1162 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 HLA-DQB2P05538 268 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 LPOP22079 712 aaPredicted RBP13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 SMARCB1Q12824 385 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 TRIP4Q15650 581 aaPredicted RBP13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 HECTD2Q5U5R9 776 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 ZNF280BQ86YH2 543 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 FSTL5Q8N475 847 aaPredicted RBP13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 SH3KBP1Q96B97 665 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 OLFM3Q96PB7 478 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 ECSITQ9BQ95 431 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 HGH1Q9BTY7 390 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 PIF1Q9H611 641 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 TAS2R1Q9NYW7 299 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 ZNF212Q9UDV6 495 aa13.28□□□□□ -0.28
PPP4R3B-206ENST00000616407 AOC2O75106 756 aa13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 CTPS1P17812 591 aa13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 CORO1AP31146 461 aaKnown RBP13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 MRPS22P82650 360 aaKnown RBP13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 IRF9Q00978 393 aa13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 GALNT2Q10471 571 aa13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 KRT72Q14CN4 511 aa13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 C17orf99Q6UX52 265 aa13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 CYP2R1Q6VVX0 501 aa13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 NET1Q7Z628 596 aaPredicted RBP13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 SAPCD2Q86UD0 394 aa13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 GSTCDQ8NEC7 633 aa13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 OR4K2Q8NGD2 314 aa13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 OR6K2Q8NGY2 324 aa13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 PTCD2Q8WV60 388 aaKnown RBP13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 LRCH1Q9Y2L9 728 aa13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 TTC24A2A3L6 582 aaPredicted RBP13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 ACSL4O60488 711 aa13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 CLDN11O75508 207 aa13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 COL6A2P12110 1019 aa13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 ARHGDIAP52565 204 aa13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 NDST2P52849 883 aa13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 SLC10A7Q0GE19 358 aa13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 ZSCAN18Q8TBC5 510 aaPredicted RBP13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 RCN3Q96D15 328 aa13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 C17orf80Q9BSJ5 609 aa13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 HAUS8Q9BT25 410 aa13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 CADM1Q9BY67 442 aaKnown RBP13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 SRRDQ9UH36 339 aa13.27□□□□□ -0.28
PPP4R3B-206ENST00000616407 IGSF6O95976 241 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 PIK3R1P27986 724 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 GNA12Q03113 381 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 KLF10Q13118 480 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 GPR158Q5T848 1215 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 TRNP1Q6NT89 227 aa13.27□□□□□ -0.29
PPP4R3B-206ENST00000616407 LINGO4Q6UY18 593 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms