RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 CLDN2P57739 230 aa16.88■□□□□ 0.29
CBWD3-211ENST00000615061 RPS21P63220 83 aaKnown RBP16.88■□□□□ 0.29
CBWD3-211ENST00000615061 BCL2L1Q07817 233 aa16.88■□□□□ 0.29
CBWD3-211ENST00000615061 HNRNPDQ14103 355 aaKnown RBP16.88■□□□□ 0.29
CBWD3-211ENST00000615061 GRM3Q14832 879 aa16.88■□□□□ 0.29
CBWD3-211ENST00000615061 TAZQ16635 292 aa16.88■□□□□ 0.29
CBWD3-211ENST00000615061 UGP2Q16851 508 aa16.88■□□□□ 0.29
CBWD3-211ENST00000615061 KIAA1161Q6NSJ0 714 aa16.88■□□□□ 0.29
CBWD3-211ENST00000615061 SPOCD1Q6ZMY3 1216 aa16.88■□□□□ 0.29
CBWD3-211ENST00000615061 KATNAL2Q8IYT4 538 aa16.88■□□□□ 0.29
CBWD3-211ENST00000615061 LRRC57Q8N9N7 239 aa16.88■□□□□ 0.29
CBWD3-211ENST00000615061 CCNYQ8ND76 341 aa16.88■□□□□ 0.29
CBWD3-211ENST00000615061 MAML1Q92585 1016 aa16.88■□□□□ 0.29
CBWD3-211ENST00000615061 ZNF641Q96N77 438 aaPredicted RBP16.88■□□□□ 0.29
CBWD3-211ENST00000615061 TSGA13Q96PP4 275 aa16.88■□□□□ 0.29
CBWD3-211ENST00000615061 WRAP53Q9BUR4 548 aaKnown RBP16.88■□□□□ 0.29
CBWD3-211ENST00000615061 SLC17A9Q9BYT1 436 aa16.88■□□□□ 0.29
CBWD3-211ENST00000615061 GRPEL1Q9HAV7 217 aa16.88■□□□□ 0.29
CBWD3-211ENST00000615061 DMTF1Q9Y222 760 aa16.88■□□□□ 0.29
CBWD3-211ENST00000615061 PCDHGC4Q9Y5F7 938 aa16.88■□□□□ 0.29
CBWD3-211ENST00000615061 PRAMEF26H0Y7S4 382 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 KCNK1O00180 336 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 TSPAN6O43657 245 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 MMP20O60882 483 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 MX2P20592 715 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 CCNCP24863 283 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 C21orf59P57076 290 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 AP1S1P61966 158 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 IHHQ14623 411 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 CFAP58Q5T655 872 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 HDAC11Q96DB2 347 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 ECHDC3Q96DC8 303 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 NUDCD1Q96RS6 583 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 PCDH12Q9NPG4 1184 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 SCUBE2Q9NQ36 999 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 RBM22Q9NW64 420 aaKnown RBP eCLIP16.87■□□□□ 0.29
CBWD3-211ENST00000615061 TTLL3Q9Y4R7 772 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 UPK3BL1B0FP48 263 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 UPK3BL2E5RIL1 263 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 CST8O60676 142 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 ZRANB2O95218 330 aaKnown RBP eCLIP16.87■□□□□ 0.29
CBWD3-211ENST00000615061 CD59P13987 128 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 CCNB1P14635 433 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 PECAM1P16284 738 aaPredicted RBP16.87■□□□□ 0.29
CBWD3-211ENST00000615061 HNRNPA2B1P22626 353 aaKnown RBP16.87■□□□□ 0.29
CBWD3-211ENST00000615061 XPAP23025 273 aaPredicted RBP16.87■□□□□ 0.29
CBWD3-211ENST00000615061 CTNNA1P35221 906 aaKnown RBP16.87■□□□□ 0.29
CBWD3-211ENST00000615061 HSPA9P38646 679 aaKnown RBP16.87■□□□□ 0.29
CBWD3-211ENST00000615061 ITKQ08881 620 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 KIF5AQ12840 1032 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 STAT4Q14765 748 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 TIGD7Q6NT04 549 aaPredicted RBP16.87■□□□□ 0.29
CBWD3-211ENST00000615061 CCDC50Q8IVM0 306 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 CCDC13Q8IYE1 715 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 BBS5Q8N3I7 341 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 KIAA1524Q8TCG1 905 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 PDCD6IPQ8WUM4 868 aaKnown RBP16.87■□□□□ 0.29
CBWD3-211ENST00000615061 OLFM3Q96PB7 478 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 SEMA3CQ99985 751 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 C1QTNF2Q9BXJ5 285 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 CAAP1Q9H8G2 361 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 ADGRG1Q9Y653 693 aa16.87■□□□□ 0.29
CBWD3-211ENST00000615061 CHD8Q9HCK8 2581 aa16.86■□□□□ 0.29
CBWD3-211ENST00000615061 hCG_1818297A0A087WSY0 165 aa16.86■□□□□ 0.29
CBWD3-211ENST00000615061 TLR4O00206 839 aa16.86■□□□□ 0.29
CBWD3-211ENST00000615061 GIPC1O14908 333 aa16.86■□□□□ 0.29
CBWD3-211ENST00000615061 CER1O95813 267 aa16.86■□□□□ 0.29
CBWD3-211ENST00000615061 HLA-DQB2P05538 268 aa16.86■□□□□ 0.29
CBWD3-211ENST00000615061 NUDT1P36639 197 aa16.86■□□□□ 0.29
CBWD3-211ENST00000615061 IL9RQ01113 521 aa16.86■□□□□ 0.29
CBWD3-211ENST00000615061 DSC2Q02487 901 aa16.86■□□□□ 0.29
CBWD3-211ENST00000615061 PPIDQ08752 370 aaKnown RBP16.86■□□□□ 0.29
CBWD3-211ENST00000615061 TRAF2Q12933 501 aa16.86■□□□□ 0.29
CBWD3-211ENST00000615061 ZBTB17Q13105 803 aa16.86■□□□□ 0.29
CBWD3-211ENST00000615061 BRAT1Q6PJG6 821 aa16.86■□□□□ 0.29
CBWD3-211ENST00000615061 IL27RAQ6UWB1 636 aa16.86■□□□□ 0.29
CBWD3-211ENST00000615061 GCNT7Q6ZNI0 430 aa16.86■□□□□ 0.29
CBWD3-211ENST00000615061 SPATS2Q86XZ4 545 aaKnown RBP16.86■□□□□ 0.29
CBWD3-211ENST00000615061 PAF1Q8N7H5 531 aa16.86■□□□□ 0.29
CBWD3-211ENST00000615061 MFSD2AQ8NA29 543 aa16.86■□□□□ 0.29
CBWD3-211ENST00000615061 HCAR2Q8TDS4 363 aa16.86■□□□□ 0.29
CBWD3-211ENST00000615061 HAUS1Q96CS2 278 aa16.86■□□□□ 0.29
CBWD3-211ENST00000615061 ZNF830Q96NB3 372 aaPredicted RBP16.86■□□□□ 0.29
CBWD3-211ENST00000615061 HERPUD2Q9BSE4 406 aa16.86■□□□□ 0.29
CBWD3-211ENST00000615061 HEMGNQ9BXL5 484 aa16.86■□□□□ 0.29
CBWD3-211ENST00000615061 CEP41Q9BYV8 373 aa16.86■□□□□ 0.29
CBWD3-211ENST00000615061 PACSIN2Q9UNF0 486 aaPredicted RBP16.86■□□□□ 0.29
CBWD3-211ENST00000615061 COQ6Q9Y2Z9 468 aa16.86■□□□□ 0.29
CBWD3-211ENST00000615061 POM121BA6NF01 834 aa16.85■□□□□ 0.29
CBWD3-211ENST00000615061 RIOK3O14730 519 aaKnown RBP16.85■□□□□ 0.29
CBWD3-211ENST00000615061 JCHAINP01591 159 aa16.85■□□□□ 0.29
CBWD3-211ENST00000615061 NXPH1P58417 271 aa16.85■□□□□ 0.29
CBWD3-211ENST00000615061 AP1B1Q10567 949 aa16.85■□□□□ 0.29
CBWD3-211ENST00000615061 TFDP3Q5H9I0 405 aa16.85■□□□□ 0.29
CBWD3-211ENST00000615061 PPM1JQ5JR12 505 aa16.85■□□□□ 0.29
CBWD3-211ENST00000615061 NT5DC3Q86UY8 548 aa16.85■□□□□ 0.29
CBWD3-211ENST00000615061 LRRC8AQ8IWT6 810 aa16.85■□□□□ 0.29
CBWD3-211ENST00000615061 RCOR2Q8IZ40 523 aa16.85■□□□□ 0.29
CBWD3-211ENST00000615061 DEFB124Q8NES8 71 aa16.85■□□□□ 0.29
CBWD3-211ENST00000615061 EXD1Q8NHP7 514 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms