RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 TRIM74Q86UV6 250 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 KDM1BQ8NB78 822 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 TRIM11Q96F44 468 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 AGAP2Q99490 1192 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 SEMA3CQ99985 751 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 SGK2Q9HBY8 427 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 R3HDM2Q9Y2K5 976 aaKnown RBP5.75□□□□□ -1.49
CPNE3-208ENST00000614678 H3BRJ5 948 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 NEMP1O14524 444 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 FFAR2O15552 330 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 BUD23O43709 281 aaKnown RBP5.75□□□□□ -1.49
CPNE3-208ENST00000614678 HYAL3O43820 417 aaPredicted RBP5.75□□□□□ -1.49
CPNE3-208ENST00000614678 KALRNO60229 2985 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 JCHAINP01591 159 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 ITGB7P26010 798 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 IGFALSP35858 605 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 RECQLP46063 649 aaPredicted RBP5.75□□□□□ -1.49
CPNE3-208ENST00000614678 AFF3P51826 1226 aaKnown RBP5.75□□□□□ -1.49
CPNE3-208ENST00000614678 NAP1L1P55209 391 aaKnown RBP5.75□□□□□ -1.49
CPNE3-208ENST00000614678 LMNB2Q03252 620 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 TSR1Q2NL82 804 aaKnown RBP5.75□□□□□ -1.49
CPNE3-208ENST00000614678 ZNF648Q5T619 568 aaPredicted RBP5.75□□□□□ -1.49
CPNE3-208ENST00000614678 SLC25A45Q8N413 288 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 LRRC57Q8N9N7 239 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 TMIEQ8NEW7 156 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 CCL4L1Q8NHW4 92 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 SETD7Q8WTS6 366 aaKnown RBP5.75□□□□□ -1.49
CPNE3-208ENST00000614678 PANX2Q96RD6 677 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 RBM15Q96T37 977 aaKnown RBP eCLIP5.75□□□□□ -1.49
CPNE3-208ENST00000614678 GORASP1Q9BQQ3 440 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 CINPQ9BW66 212 aaPredicted RBP5.75□□□□□ -1.49
CPNE3-208ENST00000614678 KCNF1Q9H3M0 494 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 TM7SF3Q9NS93 570 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 SMARCAL1Q9NZC9 954 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 A0A1B0GTW7 788 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 EIF3CLB5ME19 914 aaKnown RBP5.75□□□□□ -1.49
CPNE3-208ENST00000614678 CST8O60676 142 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 GCATO75600 419 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 SLC4A1P02730 911 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 GIMD1P0DJR0 217 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 CD68P34810 354 aaPredicted RBP5.75□□□□□ -1.49
CPNE3-208ENST00000614678 ARHGAP25P42331 645 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 CTSKP43235 329 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 CHRNA4P43681 627 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 NEK3P51956 506 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 YBEYP58557 167 aaPredicted RBP5.75□□□□□ -1.49
CPNE3-208ENST00000614678 SNRPD1P62314 119 aaKnown RBP5.75□□□□□ -1.49
CPNE3-208ENST00000614678 CCZ1BP86790 482 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 CCZ1P86791 482 aaPredicted RBP5.75□□□□□ -1.49
CPNE3-208ENST00000614678 AP1B1Q10567 949 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 GALNT3Q14435 633 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 WSCD2Q2TBF2 565 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 ZNF783Q6ZMS7 281 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 Q6ZSR6 202 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 SRLQ86TD4 932 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 RFX6Q8HWS3 928 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 CHCHD4Q8N4Q1 142 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 ATPAF2Q8N5M1 289 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 ARRDC2Q8TBH0 407 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 TEKT4Q8WW24 435 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 FOXJ1Q92949 421 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 SCAMP4Q969E2 229 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 FAF2Q96CS3 445 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 CCDC97Q96F63 343 aaPredicted RBP5.75□□□□□ -1.49
CPNE3-208ENST00000614678 EIF3CQ99613 913 aaKnown RBP5.75□□□□□ -1.49
CPNE3-208ENST00000614678 SLC17A9Q9BYT1 436 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 SUV39H2Q9H5I1 410 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 LZTFL1Q9NQ48 299 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 RBM22Q9NW64 420 aaKnown RBP eCLIP5.75□□□□□ -1.49
CPNE3-208ENST00000614678 FZD4Q9ULV1 537 aa5.75□□□□□ -1.49
CPNE3-208ENST00000614678 UNC13CQ8NB66 2214 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 ARHGAP42A6NI28 874 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 C1QTNF3-AMACRE9PGA6 284 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 POP4O95707 220 aaKnown RBP5.74□□□□□ -1.49
CPNE3-208ENST00000614678 PRNPP04156 253 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 TPM1P09493 284 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 CD38P28907 300 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 OXTRP30559 389 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 ETV3P41162 512 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 LIG3P49916 1009 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 ATXN3P54252 364 aaPredicted RBP5.74□□□□□ -1.49
CPNE3-208ENST00000614678 SIM1P81133 766 aaPredicted RBP5.74□□□□□ -1.49
CPNE3-208ENST00000614678 ZBTB16Q05516 673 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 GALNT2Q10471 571 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 FOXC1Q12948 553 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 PCSK7Q16549 785 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 HSD11B1LQ7Z5J1 315 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 HORMAD1Q86X24 394 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 C17orf53Q8N3J3 647 aaPredicted RBP5.74□□□□□ -1.49
CPNE3-208ENST00000614678 ATG4AQ8WYN0 398 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 TSACCQ96A04 125 aaPredicted RBP5.74□□□□□ -1.49
CPNE3-208ENST00000614678 RNF31Q96EP0 1072 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 GDAP1L1Q96MZ0 367 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 LENG8Q96PV6 779 aaPredicted RBP5.74□□□□□ -1.49
CPNE3-208ENST00000614678 B4GALT6Q9UBX8 382 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 GUCA1BQ9UMX6 200 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 PLEKHM1Q9Y4G2 1056 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 LRRC72A6NJI9 287 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 USP27XA6NNY8 438 aa5.74□□□□□ -1.49
CPNE3-208ENST00000614678 TRIM38O00635 465 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms