RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 STIP1P31948 543 aaKnown RBP13.37□□□□□ -0.27
MDC1-209ENST00000613547 NUDT1P36639 197 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 CD86P42081 329 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 PTGER3P43115 390 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 EPHB1P54762 984 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 RPL26P61254 145 aaKnown RBP13.37□□□□□ -0.27
MDC1-209ENST00000613547 TRAF2Q12933 501 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 PRPSAP1Q14558 356 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 SLC14A2Q15849 920 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 CCNG2Q16589 344 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 UGP2Q16851 508 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 KIAA1161Q6NSJ0 714 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 RABEPKQ7Z6M1 372 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 ZNF567Q8N184 647 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 C17orf53Q8N3J3 647 aaPredicted RBP13.37□□□□□ -0.27
MDC1-209ENST00000613547 DEFB119Q8N690 84 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 ARRDC2Q8TBH0 407 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 C1orf54Q8WWF1 131 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 VOPP1Q96AW1 172 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 LRRC45Q96CN5 670 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 ECHDC3Q96DC8 303 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 IMP4Q96G21 291 aaKnown RBP13.37□□□□□ -0.27
MDC1-209ENST00000613547 FEM1CQ96JP0 617 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 SPATA13Q96N96 652 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 WDR24Q96S15 920 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 HINFPQ9BQA5 517 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 TDRD1Q9BXT4 1180 aaKnown RBP13.37□□□□□ -0.27
MDC1-209ENST00000613547 VPS45Q9NRW7 570 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 SUSD2Q9UGT4 822 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 RSPH14Q9UHP6 348 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 DNPEPQ9ULA0 475 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 TTC7AQ9ULT0 858 aaPredicted RBP13.37□□□□□ -0.27
MDC1-209ENST00000613547 PHTF1Q9UMS5 762 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 RPL26L1Q9UNX3 145 aaKnown RBP13.37□□□□□ -0.27
MDC1-209ENST00000613547 ZNF148Q9UQR1 794 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.37□□□□□ -0.27
MDC1-209ENST00000613547 NUP205Q92621 2012 aa13.37□□□□□ -0.27
MDC1-209ENST00000613547 GOLGA6L10A0A0M3HER8 536 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 C5orf60A6NFR6 353 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 HTRA2O43464 458 aaPredicted RBP13.36□□□□□ -0.27
MDC1-209ENST00000613547 OPHN1O60890 802 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 RNGTTO60942 597 aaKnown RBP13.36□□□□□ -0.27
MDC1-209ENST00000613547 ANXA9O76027 345 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 EPN2O95208 641 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 PGLSO95336 258 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 GNSP15586 552 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 TIMP2P16035 220 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 PRLRP16471 622 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 NFKB1P19838 968 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 CASQ1P31415 396 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 HOXD12P35452 270 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 ACTN2P35609 894 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 ABL2P42684 1182 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 TAS2R38P59533 333 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 ETF1P62495 437 aaKnown RBP13.36□□□□□ -0.27
MDC1-209ENST00000613547 RPS21P63220 83 aaKnown RBP13.36□□□□□ -0.27
MDC1-209ENST00000613547 FAM193AP78312 1265 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 SKOR1P84550 965 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 CREB5Q02930 508 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 NIPAL4Q0D2K0 466 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 SETMARQ53H47 684 aaPredicted RBP13.36□□□□□ -0.27
MDC1-209ENST00000613547 ANKRD20A2Q5SQ80 823 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 ANKRD20A1Q5TYW2 823 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 ANKRD20A3Q5VUR7 823 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 PAPD7Q5XG87 772 aaKnown RBP13.36□□□□□ -0.27
MDC1-209ENST00000613547 CCDC70Q6NSX1 233 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 ARHGEF18Q6ZSZ5 1173 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 USP45Q70EL2 814 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 PRPF39Q86UA1 669 aaKnown RBP13.36□□□□□ -0.27
MDC1-209ENST00000613547 TRIM69Q86WT6 500 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 HORMAD1Q86X24 394 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 SYT12Q8IV01 421 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 SLC41A1Q8IVJ1 513 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 FAM71DQ8N9W8 422 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 ACTRT1Q8TDG2 376 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 CXorf40AQ8TE69 158 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 RUBCNQ92622 972 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 BIRC7Q96CA5 298 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 IFT43Q96FT9 208 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 FCRL5Q96RD9 977 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 RBM15Q96T37 977 aaKnown RBP eCLIP13.36□□□□□ -0.272e-6■■■■□ 23.9
MDC1-209ENST00000613547 TMEM121Q9BTD3 319 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 ADGRE3Q9BY15 652 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 MIR1-1HGQ9H1L0 117 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 C10orf88Q9H8K7 445 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 PCDH9Q9HC56 1237 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 SAR1BQ9Y6B6 198 aa13.36□□□□□ -0.27
MDC1-209ENST00000613547 A0A1W2PQU0 124 aa13.35□□□□□ -0.27
MDC1-209ENST00000613547 GOLGA6CA6NDK9 693 aa13.35□□□□□ -0.27
MDC1-209ENST00000613547 GOLGA6BA6NDN3 693 aa13.35□□□□□ -0.27
MDC1-209ENST00000613547 PRR5-ARHGAP8B1AHC4 643 aa13.35□□□□□ -0.27
MDC1-209ENST00000613547 AREL1O15033 823 aa13.35□□□□□ -0.27
MDC1-209ENST00000613547 IGHV4-34P06331 123 aa13.35□□□□□ -0.27
MDC1-209ENST00000613547 GOLGA6DP0CG33 693 aa13.35□□□□□ -0.27
MDC1-209ENST00000613547 CYP2A6P11509 494 aaPredicted RBP13.35□□□□□ -0.27
MDC1-209ENST00000613547 ITPKAP23677 461 aa13.35□□□□□ -0.27
MDC1-209ENST00000613547 CD27P26842 260 aa13.35□□□□□ -0.27
MDC1-209ENST00000613547 SGCGQ13326 291 aa13.35□□□□□ -0.27
MDC1-209ENST00000613547 SNX1Q13596 522 aa13.35□□□□□ -0.27
MDC1-209ENST00000613547 P3H1Q32P28 736 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms