RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 RETREG3Q86VR2 466 aa16.71■□□□□ 0.26
TSKU-205ENST00000612930 SLC41A1Q8IVJ1 513 aa16.71■□□□□ 0.26
TSKU-205ENST00000612930 AQP12AQ8IXF9 295 aa16.71■□□□□ 0.26
TSKU-205ENST00000612930 DNAAF3Q8N9W5 541 aa16.71■□□□□ 0.26
TSKU-205ENST00000612930 ZNF347Q96SE7 839 aa16.71■□□□□ 0.26
TSKU-205ENST00000612930 RPF1Q9H9Y2 349 aaKnown RBP16.71■□□□□ 0.26
TSKU-205ENST00000612930 MEAF6Q9HAF1 191 aa16.71■□□□□ 0.26
TSKU-205ENST00000612930 LRRC4Q9HBW1 653 aa16.71■□□□□ 0.26
TSKU-205ENST00000612930 CASS4Q9NQ75 786 aa16.71■□□□□ 0.26
TSKU-205ENST00000612930 KCNK1O00180 336 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 VWA5AO00534 786 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 LSM1O15116 133 aaKnown RBP16.7■□□□□ 0.26
TSKU-205ENST00000612930 PGK1P00558 417 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 MBL2P11226 248 aaPredicted RBP16.7■□□□□ 0.26
TSKU-205ENST00000612930 IL10P22301 178 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 INCA1Q0VD86 236 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 PERM1Q5SV97 790 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 CCNYL2Q5T2Q4 361 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 ATF7IP2Q5U623 682 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 ERO1BQ86YB8 467 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 PSTKQ8IV42 348 aaKnown RBP16.7■□□□□ 0.26
TSKU-205ENST00000612930 ARL10Q8N8L6 244 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 HPS1Q92902 700 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 HDAC10Q969S8 669 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 SH3YL1Q96HL8 342 aaPredicted RBP16.7■□□□□ 0.26
TSKU-205ENST00000612930 TBC1D13Q9NVG8 400 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 PKD2L2Q9NZM6 624 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 DNMT3BQ9UBC3 853 aaKnown RBP16.7■□□□□ 0.26
TSKU-205ENST00000612930 TLL2Q9Y6L7 1015 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 NEMP2A6NFY4 417 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 AP2A1O95782 977 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 C7P10643 843 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 NMBRP28336 390 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 BFSP2Q13515 415 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 XAF1Q6GPH4 301 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 THOC7Q6I9Y2 204 aaKnown RBP16.7■□□□□ 0.26
TSKU-205ENST00000612930 ZNF773Q6PK81 442 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 RPS27LQ71UM5 84 aaKnown RBP16.7■□□□□ 0.26
TSKU-205ENST00000612930 NANOGNBQ7Z5D8 188 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 IFNLR1Q8IU57 520 aaPredicted RBP16.7■□□□□ 0.26
TSKU-205ENST00000612930 FUNDC1Q8IVP5 155 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 ADGRG5Q8IZF4 528 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 HGH1Q9BTY7 390 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 YTHDF1Q9BYJ9 559 aaKnown RBP16.7■□□□□ 0.26
TSKU-205ENST00000612930 POMKQ9H5K3 350 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 SMPD3Q9NY59 655 aaPredicted RBP16.7■□□□□ 0.26
TSKU-205ENST00000612930 TRAF6Q9Y4K3 522 aa16.7■□□□□ 0.26
TSKU-205ENST00000612930 IGKV6D-21A0A0A0MT36 114 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 SNAP29O95721 258 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 ELK4P28324 431 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 HPCAL1P37235 193 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 ARL4AP40617 200 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 HADHAP40939 763 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 YBX1P67809 324 aaKnown RBP16.69■□□□□ 0.26
TSKU-205ENST00000612930 INPP5AQ14642 412 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 SOWAHAQ2M3V2 549 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 Q3C1V9 767 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 TMTC4Q5T4D3 741 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 GTF2IRD2BQ6EKJ0 949 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 GTF2IRD2Q86UP8 949 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 CEP97Q8IW35 865 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 DDIASQ8IXT1 998 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 RAB2BQ8WUD1 216 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 SLC35F5Q8WV83 523 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 AKT1S1Q96B36 256 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 HPDLQ96IR7 371 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 MYRFLQ96LU7 910 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 APOL2Q9BQE5 337 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 HERC2P3Q9BVR0 1158 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 LHPPQ9H008 270 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 CDT1Q9H211 546 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 GBA3Q9H227 469 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 RHOJQ9H4E5 214 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 IL1RL2Q9HB29 575 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 CCDC78A2IDD5 438 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 CYP2C9P11712 490 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 TPH1P17752 444 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 RCVRNP35243 200 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 ATP6V0D1P61421 351 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 ADARB1P78563 741 aaKnown RBP16.69■□□□□ 0.26
TSKU-205ENST00000612930 C6orf183Q5T699 404 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 NT5DC4Q86YG4 428 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 SNX29P2Q8IUI4 249 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 SPNS2Q8IVW8 549 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 MFSD6LQ8IWD5 586 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 PNPT1Q8TCS8 783 aaKnown RBP16.69■□□□□ 0.26
TSKU-205ENST00000612930 TPK1Q9H3S4 243 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 RAD21L1Q9H4I0 556 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 RPAP3Q9H6T3 665 aaPredicted RBP16.69■□□□□ 0.26
TSKU-205ENST00000612930 TMPRSS4Q9NRS4 437 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 VPS51Q9UID3 782 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 ACOT9Q9Y305 439 aa16.69■□□□□ 0.26
TSKU-205ENST00000612930 MTF2Q9Y483 593 aaPredicted RBP16.69■□□□□ 0.26
TSKU-205ENST00000612930 PFDN6O15212 129 aa16.68■□□□□ 0.26
TSKU-205ENST00000612930 GPC4O75487 556 aa16.68■□□□□ 0.26
TSKU-205ENST00000612930 S100A1P23297 94 aa16.68■□□□□ 0.26
TSKU-205ENST00000612930 PSMA4P25789 261 aaKnown RBP16.68■□□□□ 0.26
TSKU-205ENST00000612930 IFITM3Q01628 133 aa16.68■□□□□ 0.26
TSKU-205ENST00000612930 DNAJC14Q6Y2X3 702 aaPredicted RBP16.68■□□□□ 0.26
TSKU-205ENST00000612930 SLC26A9Q7LBE3 791 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms