RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 NUP93Q8N1F7 819 aa14.16□□□□□ -0.14
COL6A1-207ENST00000612273 KCNA7Q96RP8 456 aa14.16□□□□□ -0.14
COL6A1-207ENST00000612273 MAGEB16A2A368 324 aa14.16□□□□□ -0.14
COL6A1-207ENST00000612273 ECT2LQ008S8 904 aa14.16□□□□□ -0.14
COL6A1-207ENST00000612273 FUT11Q495W5 492 aa14.16□□□□□ -0.14
COL6A1-207ENST00000612273 TIGD5Q53EQ6 642 aa14.16□□□□□ -0.14
COL6A1-207ENST00000612273 C14orf80Q86SX3 495 aa14.16□□□□□ -0.14
COL6A1-207ENST00000612273 CANT1Q8WVQ1 401 aa14.16□□□□□ -0.14
COL6A1-207ENST00000612273 DNAI2Q9GZS0 605 aa14.16□□□□□ -0.14
COL6A1-207ENST00000612273 GLOD4Q9HC38 313 aa14.16□□□□□ -0.14
COL6A1-207ENST00000612273 A8MT66 165 aa14.16□□□□□ -0.14
COL6A1-207ENST00000612273 TNFAIP8O95379 198 aa14.16□□□□□ -0.14
COL6A1-207ENST00000612273 WNT3AP56704 352 aa14.16□□□□□ -0.14
COL6A1-207ENST00000612273 NSUN2Q08J23 767 aaKnown RBP eCLIP14.16□□□□□ -0.14
COL6A1-207ENST00000612273 SEMA3BQ13214 749 aa14.16□□□□□ -0.14
COL6A1-207ENST00000612273 CCL14Q16627 93 aa14.16□□□□□ -0.14
COL6A1-207ENST00000612273 VPS26BQ4G0F5 336 aa14.16□□□□□ -0.14
COL6A1-207ENST00000612273 REP15Q6BDI9 236 aa14.16□□□□□ -0.14
COL6A1-207ENST00000612273 TLK2Q86UE8 772 aa14.16□□□□□ -0.14
COL6A1-207ENST00000612273 CIR1Q86X95 450 aaPredicted RBP14.16□□□□□ -0.14
COL6A1-207ENST00000612273 SPPL2BQ8TCT7 592 aa14.16□□□□□ -0.14
COL6A1-207ENST00000612273 C3orf30Q96M34 536 aa14.16□□□□□ -0.14
COL6A1-207ENST00000612273 GPR78Q96P69 363 aa14.16□□□□□ -0.14
COL6A1-207ENST00000612273 SOX17Q9H6I2 414 aaPredicted RBP14.16□□□□□ -0.14
COL6A1-207ENST00000612273 PCDHGA7Q9Y5G6 932 aa14.16□□□□□ -0.14
COL6A1-207ENST00000612273 FBP2O00757 339 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 NCAM2O15394 837 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 PFDN1O60925 122 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 PRSS56P0CW18 603 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 PRDX6P30041 224 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 LRPAP1P30533 357 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 CD86P42081 329 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 GALK1P51570 392 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 GRM2Q14416 872 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 ZBTB49Q6ZSB9 765 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 HMGCLL1Q8TB92 370 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 KIFC1Q9BW19 673 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 KCNH4Q9UQ05 1017 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 CROCCQ5TZA2 2017 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 RRN3P2A6NIE6 340 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 J3KR12 359 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 ACOT8O14734 319 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 BCAS2O75934 225 aaPredicted RBP14.15□□□□□ -0.14
COL6A1-207ENST00000612273 APOA4P06727 396 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 GNAO1P09471 354 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 WARSP23381 471 aaKnown RBP14.15□□□□□ -0.14
COL6A1-207ENST00000612273 ARSDP51689 593 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 DENND5AQ6IQ26 1287 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 MARVELD2Q8N4S9 558 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 FAM47BQ8NA70 645 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 HDAC10Q969S8 669 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 KATNBL1Q9H079 304 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 ABHD16BQ9H3Z7 469 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 CNGB3Q9NQW8 809 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 CACNA2D2Q9NY47 1150 aa14.15□□□□□ -0.14
COL6A1-207ENST00000612273 HEATR9A2RTY3 570 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 TRIM38O00635 465 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 THP07101 528 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 CCR1P32246 355 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 SCNN1AP37088 669 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 GRIK1P39086 918 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 DSC2Q02487 901 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 TRIM25Q14258 630 aaKnown RBP14.14□□□□□ -0.15
COL6A1-207ENST00000612273 CHST15Q7LFX5 561 aaPredicted RBP14.14□□□□□ -0.15
COL6A1-207ENST00000612273 MIB1Q86YT6 1006 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 SPPL2CQ8IUH8 684 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 CPNE9Q8IYJ1 553 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 ZNF786Q8N393 782 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 TOP6BLQ8N6T0 577 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 TSPAN14Q8NG11 270 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 BLOC1S5Q8TDH9 187 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 NSUN5Q96P11 429 aaKnown RBP14.14□□□□□ -0.15
COL6A1-207ENST00000612273 HAPLN3Q96S86 360 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 MARCH4Q9P2E8 410 aaPredicted RBP14.14□□□□□ -0.15
COL6A1-207ENST00000612273 AAR2Q9Y312 384 aaKnown RBP14.14□□□□□ -0.15
COL6A1-207ENST00000612273 TRIP12Q14669 1992 aaPredicted RBP14.14□□□□□ -0.15
COL6A1-207ENST00000612273 MAGEB3O15480 346 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 ATP5F1P24539 256 aaPredicted RBP14.14□□□□□ -0.15
COL6A1-207ENST00000612273 RPS6KA2Q15349 733 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 UGP2Q16851 508 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 B3GNT6Q6ZMB0 384 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 LINC00523Q86TU6 105 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 CASP10Q92851 521 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 ISL2Q96A47 359 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 HBEGFQ99075 208 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 GALNT8Q9NY28 637 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 IPO11Q9UI26 975 aaKnown RBP14.14□□□□□ -0.15
COL6A1-207ENST00000612273 TCAF1Q9Y4C2 921 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 RNF103-CHMP3A0A140T963 221 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 SMIM31A0A1B0GVY4 71 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 ERI2A8K979 691 aaKnown RBP14.14□□□□□ -0.15
COL6A1-207ENST00000612273 TARM1B6A8C7 271 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 MTSS1O43312 755 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 TBX18O95935 607 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 ITGB1P05556 798 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 ARCN1P48444 511 aaKnown RBP14.14□□□□□ -0.15
COL6A1-207ENST00000612273 RPL34P49207 117 aaKnown RBP14.14□□□□□ -0.15
COL6A1-207ENST00000612273 CBLBQ13191 982 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 PLA2G4EQ3MJ16 856 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 LRRTM3Q86VH5 581 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms