RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 NLRP9Q7RTR0 991 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 OTOAQ7RTW8 1153 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 PIM3Q86V86 326 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 HS6ST3Q8IZP7 471 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 PLD6Q8N2A8 252 aaKnown RBP9.92□□□□□ -0.82
CTCFL-222ENST00000609232 FAM156AQ8NDB6 213 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 HDAC10Q969S8 669 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 ZNF333Q96JL9 665 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 C8orf48Q96LL4 319 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 SLC22A12Q96S37 553 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 TRIM55Q9BYV6 548 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 VCX3BQ9H321 246 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 CCDC134Q9H6E4 229 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 VCX3AQ9NNX9 186 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 FCF1Q9Y324 198 aaKnown RBP9.92□□□□□ -0.82
CTCFL-222ENST00000609232 FARP1Q9Y4F1 1045 aaPredicted RBP9.92□□□□□ -0.82
CTCFL-222ENST00000609232 LRRC42Q9Y546 428 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 PCDHB9Q9Y5E1 797 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.92□□□□□ -0.82
CTCFL-222ENST00000609232 CACNA1CQ13936 2221 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 B2RBV5 119 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 TNFRSF10BO14763 440 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 DCXO43602 365 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 PEX11AO75192 247 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 WFS1O76024 890 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 SUPT7LO94864 414 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 TRIM16O95361 564 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 ENO3P13929 434 aaPredicted RBP9.92□□□□□ -0.82
CTCFL-222ENST00000609232 AIF1P55008 147 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 CCDC15Q0P6D6 951 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 CDH18Q13634 790 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 ZNF789Q5FWF6 425 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 C16orf87Q6PH81 154 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 BHLHA9Q7RTU4 235 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 APLFQ8IW19 511 aaPredicted RBP9.92□□□□□ -0.82
CTCFL-222ENST00000609232 DDIASQ8IXT1 998 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 TMEM199Q8N511 208 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 OR13C4Q8NGS5 318 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 IGSF21Q96ID5 467 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 TBC1D10AQ9BXI6 508 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 CCDC68Q9H2F9 335 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 CATSPERBQ9H7T0 1116 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 ATP13A1Q9HD20 1204 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 TBX21Q9UL17 535 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 ARL5AQ9Y689 179 aa9.92□□□□□ -0.82
CTCFL-222ENST00000609232 A0A096LPK6 155 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 HACD1B0YJ81 288 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 VHLP40337 213 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 MARC1Q5VT66 337 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 TRABD2AQ86V40 505 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 CAND1Q86VP6 1230 aaKnown RBP9.91□□□□□ -0.82
CTCFL-222ENST00000609232 C10orf107Q8IVU9 208 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 CKAP2Q8WWK9 683 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 E2F7Q96AV8 911 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 MYEOVQ96EZ4 313 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 TBATAQ96M53 351 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 SCML2Q9UQR0 700 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 CHADO15335 359 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 ITM2AO43736 263 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 CXCL10P02778 98 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 ZCCHC18P0CG32 403 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 FMO4P31512 558 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 STX3Q13277 289 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 DDX39BQ13838 428 aaKnown RBP9.91□□□□□ -0.82
CTCFL-222ENST00000609232 LBRQ14739 615 aaKnown RBP9.91□□□□□ -0.82
CTCFL-222ENST00000609232 RCN1Q15293 331 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 BRMS1LQ5PSV4 323 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 IRGCQ6NXR0 463 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 DDX53Q86TM3 631 aaKnown RBP9.91□□□□□ -0.82
CTCFL-222ENST00000609232 KCNMB4Q86W47 210 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 SMOC2Q9H3U7 446 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 PFDN4Q9NQP4 134 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 FREM2Q5SZK8 3169 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 MAP3K13O43283 966 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 RAMP2O60895 175 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 DCTN3O75935 186 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 LMNAP02545 664 aaKnown RBP9.91□□□□□ -0.82
CTCFL-222ENST00000609232 CHRNGP07510 517 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 SLC2A3P11169 496 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 GFAPP14136 432 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 GABRR2P28476 465 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 TUFMP49411 452 aaKnown RBP9.91□□□□□ -0.82
CTCFL-222ENST00000609232 HARS2P49590 506 aaKnown RBP9.91□□□□□ -0.82
CTCFL-222ENST00000609232 SLC25A3Q00325 362 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 DPYSQ14117 519 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 VEPH1Q14D04 833 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 SKIV2LQ15477 1246 aaKnown RBP9.91□□□□□ -0.82
CTCFL-222ENST00000609232 TRIM67Q6ZTA4 783 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 SLC26A11Q86WA9 606 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 CCDC117Q8IWD4 279 aaPredicted RBP9.91□□□□□ -0.82
CTCFL-222ENST00000609232 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.91□□□□□ -0.82
CTCFL-222ENST00000609232 CLDN19Q8N6F1 224 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 ZSCAN18Q8TBC5 510 aaPredicted RBP9.91□□□□□ -0.82
CTCFL-222ENST00000609232 IGSF8Q969P0 613 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 GRAMD1AQ96CP6 724 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 TMEM120AQ9BXJ8 343 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 DCLRE1BQ9H816 532 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 HCFC1R1Q9NWW0 138 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 TMEM216Q9P0N5 145 aa9.91□□□□□ -0.82
CTCFL-222ENST00000609232 LRCH1Q9Y2L9 728 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms