RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 OR7D4Q8NG98 312 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 GOLGA5Q8TBA6 731 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 ZDHHC16Q969W1 377 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 TBATAQ96M53 351 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 C5orf34Q96MH7 638 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 ZSWIM1Q9BR11 485 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 APOOQ9BUR5 198 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 SRRTQ9BXP5 876 aaKnown RBP9.38□□□□□ -0.91
CTCFL-220ENST00000608858 TRIM55Q9BYV6 548 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 ASPSCR1Q9BZE9 553 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 SPRY4Q9C004 299 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 TMEM168Q9H0V1 697 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 APMAPQ9HDC9 416 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 ST7Q9NRC1 585 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 SPATS2LQ9NUQ6 558 aaKnown RBP9.38□□□□□ -0.91
CTCFL-220ENST00000608858 HECAQ9UBI9 543 aaPredicted RBP9.38□□□□□ -0.91
CTCFL-220ENST00000608858 KLQ9UEF7 1012 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 SMC3Q9UQE7 1217 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 FCF1Q9Y324 198 aaKnown RBP9.38□□□□□ -0.91
CTCFL-220ENST00000608858 KCTD3Q9Y597 815 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 PCDHB3Q9Y5E6 796 aa9.38□□□□□ -0.91
CTCFL-220ENST00000608858 TRBV23OR9-2A0A075B6M9 112 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 M0QYV0 167 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 RNF225M0QZC1 329 aaPredicted RBP9.37□□□□□ -0.91
CTCFL-220ENST00000608858 AP1G1O43747 822 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 RHOCP08134 193 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 SETSIPP0DME0 302 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 VDRP11473 427 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 PNLIPP16233 465 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 CCL11P51671 97 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 CCNHP51946 323 aaPredicted RBP9.37□□□□□ -0.91
CTCFL-220ENST00000608858 LIMK2P53671 638 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 MC1RQ01726 317 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 IRF4Q15306 451 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 NR6A1Q15406 480 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 E2F4Q16254 413 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 ALFQ53S48 1182 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 SPECC1LQ69YQ0 1117 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 C22orf39Q6P5X5 142 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 LEKR1Q6ZMV7 388 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 SLC9A9Q8IVB4 645 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 SCML4Q8N228 414 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 TP53I13Q8NBR0 393 aaPredicted RBP9.37□□□□□ -0.91
CTCFL-220ENST00000608858 NETO2Q8NC67 525 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 CCDC112Q8NEF3 446 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 RTP4Q96DX8 246 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 DDA1Q9BW61 102 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 TM6SF2Q9BZW4 377 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 KCTD10Q9H3F6 313 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.37□□□□□ -0.91
CTCFL-220ENST00000608858 RAB20Q9NX57 234 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 SLC5A6Q9Y289 635 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 HS3ST4Q9Y661 456 aa9.37□□□□□ -0.91
CTCFL-220ENST00000608858 OAS3Q9Y6K5 1087 aaKnown RBP9.37□□□□□ -0.91
CTCFL-220ENST00000608858 MTORP42345 2549 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 CHD5Q8TDI0 1954 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 PIPSLA2A3N6 862 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 TMEM202A6NGA9 273 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 KRIT1O00522 736 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 HGSO14964 777 aaPredicted RBP9.36□□□□□ -0.91
CTCFL-220ENST00000608858 RFPL1O75677 317 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 STK17BO94768 372 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 KRT13P13646 458 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 BRD2P25440 801 aaKnown RBP9.36□□□□□ -0.91
CTCFL-220ENST00000608858 HTR1BP28222 390 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 DLSTP36957 453 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 DPYDQ12882 1025 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 CHAF1BQ13112 559 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 BIRC2Q13490 618 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 WSCD2Q2TBF2 565 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 ANKRD40Q6AI12 368 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 LCLAT1Q6UWP7 414 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 TFAP2DQ7Z6R9 452 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 SLC34A3Q8N130 599 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 DENND6BQ8NEG7 585 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 CXorf40AQ8TE69 158 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 PATE1Q8WXA2 126 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 ASB12Q8WXK4 309 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 OR1E3Q8WZA6 343 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 PDXPQ96GD0 296 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 TMX3Q96JJ7 454 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 KLHL32Q96NJ5 620 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 RBM15Q96T37 977 aaKnown RBP eCLIP9.36□□□□□ -0.919e-11■□□□□ 8.6
CTCFL-220ENST00000608858 EFHD1Q9BUP0 239 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 C2orf49Q9BVC5 232 aaPredicted RBP9.36□□□□□ -0.91
CTCFL-220ENST00000608858 SLC4A5Q9BY07 1137 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 TMEM8AQ9HCN3 771 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 SLAMF7Q9NQ25 335 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 MPP6Q9NZW5 540 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 MAPK8IP1Q9UQF2 711 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 TBC1D30Q9Y2I9 924 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 RPS6KL1Q9Y6S9 549 aa9.36□□□□□ -0.91
CTCFL-220ENST00000608858 ARHGEF17Q96PE2 2063 aaPredicted RBP9.35□□□□□ -0.91
CTCFL-220ENST00000608858 POLR2DO15514 142 aaKnown RBP9.35□□□□□ -0.91
CTCFL-220ENST00000608858 NUDT21O43809 227 aaKnown RBP9.35□□□□□ -0.91
CTCFL-220ENST00000608858 CLDN11O75508 207 aa9.35□□□□□ -0.91
CTCFL-220ENST00000608858 CBX6O95503 412 aa9.35□□□□□ -0.91
CTCFL-220ENST00000608858 ECEL1O95672 775 aa9.35□□□□□ -0.91
CTCFL-220ENST00000608858 PCCBP05166 539 aa9.35□□□□□ -0.91
CTCFL-220ENST00000608858 FGF1P05230 155 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms