RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 TMEM135Q86UB9 458 aa16.64■□□□□ 0.25
PMF1-206ENST00000606952 RNF135Q8IUD6 432 aa16.64■□□□□ 0.25
PMF1-206ENST00000606952 IGDCC3Q8IVU1 814 aa16.64■□□□□ 0.25
PMF1-206ENST00000606952 IQCKQ8N0W5 287 aa16.64■□□□□ 0.25
PMF1-206ENST00000606952 MPP5Q8N3R9 675 aa16.64■□□□□ 0.25
PMF1-206ENST00000606952 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.64■□□□□ 0.25
PMF1-206ENST00000606952 DNAAF3Q8N9W5 541 aa16.64■□□□□ 0.25
PMF1-206ENST00000606952 PYROXD1Q8WU10 500 aa16.64■□□□□ 0.25
PMF1-206ENST00000606952 PEX13Q92968 403 aa16.64■□□□□ 0.25
PMF1-206ENST00000606952 IFT43Q96FT9 208 aa16.64■□□□□ 0.25
PMF1-206ENST00000606952 C9orf72Q96LT7 481 aa16.64■□□□□ 0.25
PMF1-206ENST00000606952 APOL2Q9BQE5 337 aa16.64■□□□□ 0.25
PMF1-206ENST00000606952 HEPHQ9BQS7 1158 aa16.64■□□□□ 0.25
PMF1-206ENST00000606952 KIFC1Q9BW19 673 aa16.64■□□□□ 0.25
PMF1-206ENST00000606952 OSBPL1AQ9BXW6 950 aa16.64■□□□□ 0.25
PMF1-206ENST00000606952 LRRC4CQ9HCJ2 640 aa16.64■□□□□ 0.25
PMF1-206ENST00000606952 HEBP1Q9NRV9 189 aa16.64■□□□□ 0.25
PMF1-206ENST00000606952 SYBUQ9NX95 663 aa16.64■□□□□ 0.25
PMF1-206ENST00000606952 RIMKLBQ9ULI2 386 aa16.64■□□□□ 0.25
PMF1-206ENST00000606952 PPIL1Q9Y3C6 166 aa16.64■□□□□ 0.25
PMF1-206ENST00000606952 FAM237BA0A1B0GVD1 139 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 CPP00450 1065 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 PGAM1P18669 254 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 IL12RB1P42701 662 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 CHRNA4P43681 627 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 RECQLP46063 649 aaPredicted RBP16.63■□□□□ 0.25
PMF1-206ENST00000606952 GRIA4P48058 902 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 SESN2P58004 480 aaPredicted RBP16.63■□□□□ 0.25
PMF1-206ENST00000606952 GPX6P59796 221 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 KYNUQ16719 465 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 ACCSLQ4AC99 568 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 FNDC3BQ53EP0 1204 aaKnown RBP16.63■□□□□ 0.25
PMF1-206ENST00000606952 PCID2Q5JVF3 399 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 C9orf64Q5T6V5 341 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 ARMC12Q5T9G4 340 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 EGFLAMQ63HQ2 1017 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 ZNF449Q6P9G9 518 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 PIH1D2Q8WWB5 315 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 STAMBPL1Q96FJ0 436 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 LYSMD1Q96S90 227 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 SRPK1Q96SB4 655 aaKnown RBP16.63■□□□□ 0.25
PMF1-206ENST00000606952 C19orf43Q9BQ61 176 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 ADGRE3Q9BY15 652 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 DKK3Q9UBP4 350 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 SUN2Q9UH99 717 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 CHMP2BQ9UQN3 213 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 CHKBQ9Y259 395 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 PCDHGC4Q9Y5F7 938 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 SCN8AQ9UQD0 1980 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 COL6A3P12111 3177 aa16.63■□□□□ 0.25
PMF1-206ENST00000606952 ZNF106Q9H2Y7 1883 aaKnown RBP16.63■□□□□ 0.25
PMF1-206ENST00000606952 USP1O94782 785 aa16.62■□□□□ 0.25
PMF1-206ENST00000606952 ALDH1A2O94788 518 aa16.62■□□□□ 0.25
PMF1-206ENST00000606952 PAPSS2O95340 614 aaPredicted RBP16.62■□□□□ 0.25
PMF1-206ENST00000606952 PIGNO95427 931 aa16.62■□□□□ 0.25
PMF1-206ENST00000606952 PDHA1P08559 390 aa16.62■□□□□ 0.25
PMF1-206ENST00000606952 PRKCHP24723 683 aa16.62■□□□□ 0.25
PMF1-206ENST00000606952 ADRA1DP25100 572 aa16.62■□□□□ 0.25
PMF1-206ENST00000606952 LAMB3Q13751 1172 aa16.62■□□□□ 0.25
PMF1-206ENST00000606952 ELAVL3Q14576 367 aaKnown RBP16.62■□□□□ 0.25
PMF1-206ENST00000606952 QPCTQ16769 361 aa16.62■□□□□ 0.25
PMF1-206ENST00000606952 HSF5Q4G112 596 aaPredicted RBP16.62■□□□□ 0.25
PMF1-206ENST00000606952 FBXO43Q4G163 708 aa16.62■□□□□ 0.25
PMF1-206ENST00000606952 CERCAMQ5T4B2 595 aa16.62■□□□□ 0.25
PMF1-206ENST00000606952 CFAP58Q5T655 872 aa16.62■□□□□ 0.25
PMF1-206ENST00000606952 UBAP2Q5T6F2 1119 aaKnown RBP16.62■□□□□ 0.25
PMF1-206ENST00000606952 ALS2CLQ60I27 953 aa16.62■□□□□ 0.25
PMF1-206ENST00000606952 LRIG3Q6UXM1 1119 aa16.62■□□□□ 0.25
PMF1-206ENST00000606952 CHST14Q8NCH0 376 aa16.62■□□□□ 0.25
PMF1-206ENST00000606952 TMIEQ8NEW7 156 aa16.62■□□□□ 0.25
PMF1-206ENST00000606952 PKNOX2Q96KN3 472 aa16.62■□□□□ 0.25
PMF1-206ENST00000606952 SUV39H2Q9H5I1 410 aa16.62■□□□□ 0.25
PMF1-206ENST00000606952 HACD3Q9P035 362 aa16.62■□□□□ 0.25
PMF1-206ENST00000606952 ZC3H7BQ9UGR2 993 aaKnown RBP16.62■□□□□ 0.25
PMF1-206ENST00000606952 SORCS3Q9UPU3 1222 aa16.62■□□□□ 0.25
PMF1-206ENST00000606952 TCAF1Q9Y4C2 921 aa16.62■□□□□ 0.25
PMF1-206ENST00000606952 NFS1Q9Y697 457 aa16.62■□□□□ 0.25
PMF1-206ENST00000606952 HEATR9A2RTY3 570 aa16.61■□□□□ 0.25
PMF1-206ENST00000606952 MROH6A6NGR9 719 aa16.61■□□□□ 0.25
PMF1-206ENST00000606952 ANKRD66B4E2M5 251 aa16.61■□□□□ 0.25
PMF1-206ENST00000606952 MAN2B1O00754 1011 aa16.61■□□□□ 0.25
PMF1-206ENST00000606952 C1QAP02745 245 aa16.61■□□□□ 0.25
PMF1-206ENST00000606952 CTSLP07711 333 aa16.61■□□□□ 0.25
PMF1-206ENST00000606952 EIF3BP55884 814 aaKnown RBP16.61■□□□□ 0.25
PMF1-206ENST00000606952 MRPS21P82921 87 aaKnown RBP16.61■□□□□ 0.25
PMF1-206ENST00000606952 PRKCQQ04759 706 aa16.61■□□□□ 0.25
PMF1-206ENST00000606952 GRSF1Q12849 480 aaKnown RBP eCLIP16.61■□□□□ 0.25
PMF1-206ENST00000606952 CAMK2GQ13555 558 aaPredicted RBP16.61■□□□□ 0.25
PMF1-206ENST00000606952 SLC29A2Q14542 456 aa16.61■□□□□ 0.25
PMF1-206ENST00000606952 PON2Q15165 354 aa16.61■□□□□ 0.25
PMF1-206ENST00000606952 SLC44A4Q53GD3 710 aa16.61■□□□□ 0.25
PMF1-206ENST00000606952 SPANXN3Q5MJ09 141 aa16.61■□□□□ 0.25
PMF1-206ENST00000606952 IER5LQ5T953 404 aa16.61■□□□□ 0.25
PMF1-206ENST00000606952 DENND2CQ68D51 928 aa16.61■□□□□ 0.25
PMF1-206ENST00000606952 PKN3Q6P5Z2 889 aa16.61■□□□□ 0.25
PMF1-206ENST00000606952 BRAT1Q6PJG6 821 aa16.61■□□□□ 0.25
PMF1-206ENST00000606952 SERPINA13PQ6UXR4 307 aa16.61■□□□□ 0.25
PMF1-206ENST00000606952 GDPD4Q6W3E5 623 aa16.61■□□□□ 0.25
PMF1-206ENST00000606952 UNC5AQ6ZN44 842 aa16.61■□□□□ 0.25
PMF1-206ENST00000606952 NLRP9Q7RTR0 991 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms