RNA–Protein interactions for RNA: ENST00000606426.1

CUX2P1-201, Transcript of cut like homeobox 2 pseudogene 1, humanhuman

BASIC

Gene CUX2P1, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2P1-201ENST00000606426 R3HDM2Q9Y2K5 976 aaKnown RBP7.56□□□□□ -1.2
CUX2P1-201ENST00000606426 RAI2Q9Y5P3 530 aa7.56□□□□□ -1.2
CUX2P1-201ENST00000606426 TBC1D3DA0A087WVF3 549 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 TBC1D3IA0A087WXS9 549 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 TBC1D3EA0A087X179 549 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 TBC1D3KA0A087X1G2 549 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 TCRBV7S2A1N4TA0A589 114 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 TBC1D3FA6NER0 549 aaPredicted RBP7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 ERI2A8K979 691 aaKnown RBP7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 METTL12A8MUP2 240 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 MEI4A8MW99 385 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 UPK3BL1B0FP48 263 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 TBC1D3LB9A6J9 549 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 UPK3BL2E5RIL1 263 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 CCDC188H7C350 402 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 HRO43593 1189 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 RNGTTO60942 597 aaKnown RBP7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 PGLSO95336 258 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 GAS8O95995 478 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 EPOP01588 193 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 TBC1D3HP0C7X1 549 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 GKP32189 559 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 ACSL1P33121 698 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 HOXD12P35452 270 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 FDFT1P37268 417 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 CD86P42081 329 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 GRIA4P48058 902 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 CCR5P51681 352 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 RPS21P63220 83 aaKnown RBP7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 SKOR1P84550 965 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 CDK18Q07002 472 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 CKAP4Q07065 602 aaKnown RBP7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 NIPAL4Q0D2K0 466 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 CYP1B1Q16678 543 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 PLK5Q496M5 336 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 PIP5KL1Q5T9C9 394 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 PMS2CLQ68D20 193 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 KIAA0895LQ68EN5 471 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 TBC1D3GQ6DHY5 549 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 TBC1D3CQ6IPX1 549 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 PRR23BQ6ZRT6 265 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 PARS2Q7L3T8 475 aaKnown RBP7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 PRPF39Q86UA1 669 aaKnown RBP7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 FAM124AQ86V42 546 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 TRIM69Q86WT6 500 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 CAMK1DQ8IU85 385 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 RAVER1Q8IY67 606 aaKnown RBP7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 TBC1D3Q8IZP1 549 aaPredicted RBP7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 C17orf53Q8N3J3 647 aaPredicted RBP7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 FAM71DQ8N9W8 422 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 CXorf40AQ8TE69 158 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 COG1Q8WTW3 980 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 PDCD6IPQ8WUM4 868 aaKnown RBP7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 LRRN4Q8WUT4 740 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 C1orf54Q8WWF1 131 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 ATG4AQ8WYN0 398 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 MAGOHBQ96A72 148 aaKnown RBP7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 ARRDC3Q96B67 414 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 TADA1Q96BN2 335 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 ZNF419Q96HQ0 510 aaPredicted RBP7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 C16orf45Q96MC5 204 aaPredicted RBP7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 FAM118BQ9BPY3 351 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 GPR174Q9BXC1 333 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 C1QTNF7Q9BXJ2 289 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 FSD1LQ9BXM9 530 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 PCDH9Q9HC56 1237 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 PAK5Q9P286 719 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 SUSD2Q9UGT4 822 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 DMTF1Q9Y222 760 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 PPIL1Q9Y3C6 166 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 PCDHB9Q9Y5E1 797 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 PCDHGC4Q9Y5F7 938 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 PCDHGA5Q9Y5G8 931 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 FADS3Q9Y5Q0 445 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 NUP205Q92621 2012 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 ZNF318Q5VUA4 2279 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 CACNA1IQ9P0X4 2223 aa7.55□□□□□ -1.2
CUX2P1-201ENST00000606426 FAM47DPA6NHR8 397 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 PRR5-ARHGAP8B1AHC4 643 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 PROB1E7EW31 1015 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 AP3B1O00203 1094 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 PSMD11O00231 422 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 RIOK3O14730 519 aaKnown RBP7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 AREL1O15033 823 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 FZD6O60353 706 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 FOXD2O60548 495 aaPredicted RBP7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 PHF2O75151 1096 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 PCDH8O95206 1070 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 IFNB1P01574 187 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 LMNAP02545 664 aaKnown RBP7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 MMP2P08253 660 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 GNSP15586 552 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 TIMP2P16035 220 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 NFKB1P19838 968 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 HLA-DPA1P20036 260 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 CD68P34810 354 aaPredicted RBP7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 TRAF2Q12933 501 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 SGCGQ13326 291 aa7.54□□□□□ -1.2
CUX2P1-201ENST00000606426 SNX1Q13596 522 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms