RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 SUPT20HL2P0C7V6 817 aa15.56■□□□□ 0.08
RER1-209ENST00000605895 FASP25445 335 aa15.56■□□□□ 0.08
RER1-209ENST00000605895 ADAM17P78536 824 aa15.56■□□□□ 0.08
RER1-209ENST00000605895 AQP6Q13520 282 aa15.56■□□□□ 0.08
RER1-209ENST00000605895 SOWAHAQ2M3V2 549 aa15.56■□□□□ 0.08
RER1-209ENST00000605895 PLA2G4EQ3MJ16 856 aa15.56■□□□□ 0.08
RER1-209ENST00000605895 SUPT20HL1Q3ZLR7 823 aa15.56■□□□□ 0.08
RER1-209ENST00000605895 RABL3Q5HYI8 236 aa15.56■□□□□ 0.08
RER1-209ENST00000605895 CENPLQ8N0S6 344 aaPredicted RBP15.56■□□□□ 0.08
RER1-209ENST00000605895 ELMO1Q92556 727 aa15.56■□□□□ 0.08
RER1-209ENST00000605895 KHSRPQ92945 711 aaKnown RBP eCLIP15.56■□□□□ 0.082e-7■□□□□ 9.6
RER1-209ENST00000605895 SDCCAG3Q96C92 435 aa15.56■□□□□ 0.08
RER1-209ENST00000605895 RAD21L1Q9H4I0 556 aa15.56■□□□□ 0.08
RER1-209ENST00000605895 CPSF3Q9UKF6 684 aaKnown RBP15.56■□□□□ 0.08
RER1-209ENST00000605895 TCAF1Q9Y4C2 921 aa15.56■□□□□ 0.08
RER1-209ENST00000605895 STRCQ7RTU9 1775 aa15.56■□□□□ 0.08
RER1-209ENST00000605895 ZCWPW2A0A1B0GU75 182 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 IL10P22301 178 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 ARL2P36404 184 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 GSSP48637 474 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 CXCR3P49682 368 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 SEPHS1P49903 392 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 PRKAA2P54646 552 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 SLC36A3Q495N2 470 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 TSTD2Q5T7W7 516 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 TMEM236Q5W0B7 351 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 TTC30AQ86WT1 665 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 CCDC138Q96M89 665 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 EIF2AQ9BY44 585 aaKnown RBP15.55■□□□□ 0.08
RER1-209ENST00000605895 NACA2Q9H009 215 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 GBA3Q9H227 469 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 SMARCAD1Q9H4L7 1026 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 PKD2L2Q9NZM6 624 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 NUDT5Q9UKK9 219 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 TRAF6Q9Y4K3 522 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 DNAH12Q6ZR08 3092 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 PPP6CO00743 305 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 SLC35E2BP0CK96 405 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 FSHRP23945 695 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 TKTP29401 623 aaKnown RBP15.55■□□□□ 0.08
RER1-209ENST00000605895 HOXD11P31277 338 aaPredicted RBP15.55■□□□□ 0.08
RER1-209ENST00000605895 IST1P53990 364 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 TPD52P55327 224 aaPredicted RBP15.55■□□□□ 0.08
RER1-209ENST00000605895 GALNT2Q10471 571 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 POU6F1Q14863 301 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 PHKG1Q16816 387 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 CLEC14AQ86T13 490 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 ITIH5Q86UX2 942 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 HPDLQ96IR7 371 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 TBCBQ99426 244 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 ZNF670Q9BS34 389 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 CCDC68Q9H2F9 335 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 SLC38A10Q9HBR0 1119 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.55■□□□□ 0.081e-7■■□□□ 11.5
RER1-209ENST00000605895 PNMA8BQ9ULN7 279 aaPredicted RBP15.55■□□□□ 0.08
RER1-209ENST00000605895 ATP11BQ9Y2G3 1177 aa15.55■□□□□ 0.08
RER1-209ENST00000605895 KPNA4O00629 521 aaPredicted RBP15.54■□□□□ 0.08
RER1-209ENST00000605895 SNAP91O60641 907 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 KPNA6O60684 536 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 AHSGP02765 367 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 HSPA8P11142 646 aaKnown RBP15.54■□□□□ 0.08
RER1-209ENST00000605895 SHMT2P34897 504 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 ARL4AP40617 200 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 ACADVLP49748 655 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 VPS72Q15906 364 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 PYCR3Q53H96 274 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 SAMD4BQ5PRF9 694 aaKnown RBP15.54■□□□□ 0.08
RER1-209ENST00000605895 CRTC3Q6UUV7 619 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 VASH1Q7L8A9 365 aaPredicted RBP15.54■□□□□ 0.08
RER1-209ENST00000605895 RYBPQ8N488 228 aaPredicted RBP15.54■□□□□ 0.08
RER1-209ENST00000605895 PCYOX1LQ8NBM8 494 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 TRUB1Q8WWH5 349 aaKnown RBP15.54■□□□□ 0.08
RER1-209ENST00000605895 ELMO2Q96JJ3 720 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 FEM1CQ96JP0 617 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 C1orf50Q9BV19 199 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 CXCL16Q9H2A7 254 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 RPAP3Q9H6T3 665 aaPredicted RBP15.54■□□□□ 0.08
RER1-209ENST00000605895 LRRC40Q9H9A6 602 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 RPF1Q9H9Y2 349 aaKnown RBP15.54■□□□□ 0.08
RER1-209ENST00000605895 HUS1O60921 280 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 PGK1P00558 417 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 PSMA4P25789 261 aaKnown RBP15.54■□□□□ 0.08
RER1-209ENST00000605895 CYBRD1Q53TN4 286 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 ANKFN1Q8N957 763 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 C3orf30Q96M34 536 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 TMEM74Q96NL1 305 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 MINDY3Q9H8M7 445 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 ZNF70Q9UC06 446 aaPredicted RBP15.54■□□□□ 0.08
RER1-209ENST00000605895 CD300AQ9UGN4 299 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 H3BMM5 538 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 ZBTB24O43167 697 aaPredicted RBP15.54■□□□□ 0.08
RER1-209ENST00000605895 MPOP05164 745 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 BMP2P12643 396 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 TGFBR1P36897 503 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 FAM83EQ2M2I3 478 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 MFSD6LQ8IWD5 586 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 VPS33AQ96AX1 596 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 CLIP3Q96DZ5 547 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 ITCHQ96J02 903 aa15.54■□□□□ 0.08
RER1-209ENST00000605895 RNF145Q96MT1 663 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms