RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 CDR2LQ86X02 465 aaPredicted RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 ZNF781Q8N8C0 355 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 BBS1Q8NFJ9 593 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 DEPDC1BQ8WUY9 529 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 PDLIM5Q96HC4 596 aaKnown RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 HEXIM2Q96MH2 286 aaKnown RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 C7orf26Q96N11 449 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 PPP1R2P1Q96PQ5 205 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 SPATA16Q9BXB7 569 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 C1QTNF3Q9BXJ4 246 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 ZMAT3Q9HA38 289 aaKnown RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 NMRK2Q9NPI5 230 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 KCNH7Q9NS40 1196 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 ATXN7L1Q9ULK2 861 aaPredicted RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 MINPP1Q9UNW1 487 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 GPR55Q9Y2T6 319 aaPredicted RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 POMT1Q9Y6A1 747 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 SCN11AQ9UI33 1791 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 USP47Q96K76 1375 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 DNAJC25-GNG10A0A024R161 153 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 C5orf51A6NDU8 294 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 BTBD17A6NE02 478 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 TOR1AO14656 332 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 CSDE1O75534 798 aaKnown RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 KCNK5O95279 499 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 TCP1P17987 556 aaKnown RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 TGM1P22735 817 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 CHMP24386 653 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 CHRNA5P30532 468 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 ARL1P40616 181 aaPredicted RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 MAGEA1P43355 309 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 MECP2P51608 486 aaKnown RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 CCNG1P51959 295 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 PAK1Q13153 545 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 DCTN2Q13561 401 aaKnown RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 SEMA5AQ13591 1074 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 DYRK1AQ13627 763 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 ALKBH1Q13686 389 aaKnown RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 TIGD2Q4W5G0 525 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 C3orf33Q6P1S2 294 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 TAF8Q7Z7C8 310 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 FAM217AQ8IXS0 508 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 DMRTC2Q8IXT2 367 aaPredicted RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 ASCC1Q8N9N2 400 aaKnown RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 ZSWIM2Q8NEG5 633 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 FIBINQ8TAL6 211 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 ZNF596Q8TC21 504 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 MCRS1Q96EZ8 462 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 CYFIP2Q96F07 1278 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 RAD9AQ99638 391 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 VRK1Q99986 396 aaPredicted RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 PELOQ9BRX2 385 aaKnown RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 MCMBPQ9BTE3 642 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 C1QTNF7Q9BXJ2 289 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 SAP130Q9H0E3 1048 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 TMEM60Q9H2L4 133 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 SUGCTQ9HAC7 445 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 GPRC5CQ9NQ84 441 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 C20orf96Q9NUD7 363 aaPredicted RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 THG1LQ9NWX6 298 aaKnown RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 POLLQ9UGP5 575 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 ITGA11Q9UKX5 1188 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 DOLKQ9UPQ8 538 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 MAN2B2Q9Y2E5 1009 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 ZNF609O15014 1411 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 F8W036 122 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 ATP5J2-PTCD1G3V325 749 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 ACKR2O00590 384 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 CLDN4O14493 209 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 TGM5O43548 720 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 RPS17P08708 135 aaKnown RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 CD3GP09693 182 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 FBXO45P0C2W1 286 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 DARSP14868 501 aaKnown RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 NPR3P17342 541 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 TYMPP19971 482 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 CXCR2P25025 360 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 PEX2P28328 305 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 PKLRP30613 574 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 HMGCLP35914 325 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 GPR4P46093 362 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 CAPZA1P52907 286 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 RAB15P59190 212 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 ELF3P78545 371 aaPredicted RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 MRPS25P82663 173 aaKnown RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 ATP2C1P98194 919 aaPredicted RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 KIF23Q02241 960 aaPredicted RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 CHRNDQ07001 517 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 FADDQ13158 208 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 THOC5Q13769 683 aaKnown RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 DGKDQ16760 1214 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 FAM110CQ1W6H9 321 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 C2orf76Q3KRA6 126 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 RALGPS1Q5JS13 557 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 DGKKQ5KSL6 1271 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 ZDHHC20Q5W0Z9 365 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 RAET1GQ6H3X3 334 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 KIAA1161Q6NSJ0 714 aa5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 CMTR2Q8IYT2 770 aaKnown RBP5.87□□□□□ -1.47
COL4A3BP-207ENST00000604926 MCOLN2Q8IZK6 566 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms