RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 XPAP23025 273 aaPredicted RBP17.35■□□□□ 0.37
HERC3-214ENST00000601319 GJC1P36383 396 aa17.35■□□□□ 0.37
HERC3-214ENST00000601319 MMP12P39900 470 aa17.35■□□□□ 0.37
HERC3-214ENST00000601319 IL9RQ01113 521 aa17.35■□□□□ 0.37
HERC3-214ENST00000601319 SGCGQ13326 291 aa17.35■□□□□ 0.37
HERC3-214ENST00000601319 UGP2Q16851 508 aa17.35■□□□□ 0.37
HERC3-214ENST00000601319 TMEM52BQ4KMG9 183 aa17.35■□□□□ 0.37
HERC3-214ENST00000601319 ATP13A4Q4VNC1 1196 aa17.35■□□□□ 0.37
HERC3-214ENST00000601319 RALGPS1Q5JS13 557 aa17.35■□□□□ 0.37
HERC3-214ENST00000601319 CFAP58Q5T655 872 aa17.35■□□□□ 0.37
HERC3-214ENST00000601319 LRRC38Q5VT99 294 aa17.35■□□□□ 0.37
HERC3-214ENST00000601319 KANSL1Q7Z3B3 1105 aa17.35■□□□□ 0.37
HERC3-214ENST00000601319 BBS5Q8N3I7 341 aa17.35■□□□□ 0.37
HERC3-214ENST00000601319 OR13H1Q8NG92 308 aa17.35■□□□□ 0.37
HERC3-214ENST00000601319 RHBDD1Q8TEB9 315 aa17.35■□□□□ 0.37
HERC3-214ENST00000601319 IFT43Q96FT9 208 aa17.35■□□□□ 0.37
HERC3-214ENST00000601319 PANX2Q96RD6 677 aa17.35■□□□□ 0.37
HERC3-214ENST00000601319 C1QTNF7Q9BXJ2 289 aa17.35■□□□□ 0.37
HERC3-214ENST00000601319 KLHL11Q9NVR0 708 aa17.35■□□□□ 0.37
HERC3-214ENST00000601319 EPG5Q9HCE0 2579 aa17.35■□□□□ 0.37
HERC3-214ENST00000601319 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.34■□□□□ 0.37
HERC3-214ENST00000601319 TMEM110-MUSTN1A8MSY1 372 aa17.34■□□□□ 0.37
HERC3-214ENST00000601319 RAD51BO15315 384 aa17.34■□□□□ 0.37
HERC3-214ENST00000601319 SOCS5O75159 536 aa17.34■□□□□ 0.37
HERC3-214ENST00000601319 DKK1O94907 266 aa17.34■□□□□ 0.37
HERC3-214ENST00000601319 PAK4O96013 591 aaPredicted RBP17.34■□□□□ 0.37
HERC3-214ENST00000601319 FTH1P19P0C7X4 201 aa17.34■□□□□ 0.37
HERC3-214ENST00000601319 GARSP41250 739 aaKnown RBP17.34■□□□□ 0.37
HERC3-214ENST00000601319 SLC1A1P43005 524 aa17.34■□□□□ 0.37
HERC3-214ENST00000601319 MAP1BP46821 2468 aaKnown RBP17.34■□□□□ 0.37
HERC3-214ENST00000601319 RABIFP47224 123 aa17.34■□□□□ 0.37
HERC3-214ENST00000601319 CLDN2P57739 230 aa17.34■□□□□ 0.37
HERC3-214ENST00000601319 BCL2L1Q07817 233 aa17.34■□□□□ 0.37
HERC3-214ENST00000601319 FOXC1Q12948 553 aa17.34■□□□□ 0.37
HERC3-214ENST00000601319 AGERQ15109 404 aa17.34■□□□□ 0.37
HERC3-214ENST00000601319 LRRC73Q5JTD7 316 aa17.34■□□□□ 0.37
HERC3-214ENST00000601319 ERAP2Q6P179 960 aa17.34■□□□□ 0.37
HERC3-214ENST00000601319 ZSWIM9Q86XI8 627 aa17.34■□□□□ 0.37
HERC3-214ENST00000601319 GAS2L3Q86XJ1 694 aa17.34■□□□□ 0.37
HERC3-214ENST00000601319 CAMK1DQ8IU85 385 aa17.34■□□□□ 0.37
HERC3-214ENST00000601319 SLC22A18ASQ8N1D0 253 aa17.34■□□□□ 0.37
HERC3-214ENST00000601319 CXorf40AQ8TE69 158 aa17.34■□□□□ 0.37
HERC3-214ENST00000601319 NSMCE1Q8WV22 266 aa17.34■□□□□ 0.37
HERC3-214ENST00000601319 BMFQ96LC9 184 aa17.34■□□□□ 0.37
HERC3-214ENST00000601319 NUDCD1Q96RS6 583 aa17.34■□□□□ 0.37
HERC3-214ENST00000601319 ANP32EQ9BTT0 268 aa17.34■□□□□ 0.37
HERC3-214ENST00000601319 PCDH12Q9NPG4 1184 aa17.34■□□□□ 0.37
HERC3-214ENST00000601319 APOBEC2Q9Y235 224 aaKnown RBP17.34■□□□□ 0.37
HERC3-214ENST00000601319 ATP8A1Q9Y2Q0 1164 aa17.34■□□□□ 0.37
HERC3-214ENST00000601319 KMT2BQ9UMN6 2715 aaPredicted RBP17.34■□□□□ 0.37
HERC3-214ENST00000601319 USP24Q9UPU5 2620 aa17.33■□□□□ 0.36
HERC3-214ENST00000601319 A0A1W2PQ67 120 aa17.33■□□□□ 0.36
HERC3-214ENST00000601319 CFAP69A5D8W1 941 aa17.33■□□□□ 0.36
HERC3-214ENST00000601319 POM121BA6NF01 834 aa17.33■□□□□ 0.36
HERC3-214ENST00000601319 TRAFD1O14545 582 aaPredicted RBP17.33■□□□□ 0.36
HERC3-214ENST00000601319 TOR1BO14657 336 aa17.33■□□□□ 0.36
HERC3-214ENST00000601319 RIOK3O14730 519 aaKnown RBP17.33■□□□□ 0.36
HERC3-214ENST00000601319 FPGTO14772 594 aa17.33■□□□□ 0.36
HERC3-214ENST00000601319 TM7SF2O76062 418 aa17.33■□□□□ 0.36
HERC3-214ENST00000601319 ITGAVP06756 1048 aa17.33■□□□□ 0.36
HERC3-214ENST00000601319 KDELR1P24390 212 aa17.33■□□□□ 0.36
HERC3-214ENST00000601319 MMP13P45452 471 aa17.33■□□□□ 0.36
HERC3-214ENST00000601319 PRAMEF14Q5SWL7 426 aa17.33■□□□□ 0.36
HERC3-214ENST00000601319 MARC1Q5VT66 337 aa17.33■□□□□ 0.36
HERC3-214ENST00000601319 TIGD7Q6NT04 549 aaPredicted RBP17.33■□□□□ 0.36
HERC3-214ENST00000601319 PTAR1Q7Z6K3 402 aaPredicted RBP17.33■□□□□ 0.36
HERC3-214ENST00000601319 RAB44Q7Z6P3 723 aaPredicted RBP17.33■□□□□ 0.36
HERC3-214ENST00000601319 GATAD2AQ86YP4 633 aa17.33■□□□□ 0.36
HERC3-214ENST00000601319 PGBD5Q8N414 524 aa17.33■□□□□ 0.36
HERC3-214ENST00000601319 TEX26Q8N6G2 289 aa17.33■□□□□ 0.36
HERC3-214ENST00000601319 PQLC3Q8N755 202 aa17.33■□□□□ 0.36
HERC3-214ENST00000601319 MAML1Q92585 1016 aa17.33■□□□□ 0.36
HERC3-214ENST00000601319 CENPTQ96BT3 561 aa17.33■□□□□ 0.36
HERC3-214ENST00000601319 TSGA13Q96PP4 275 aa17.33■□□□□ 0.36
HERC3-214ENST00000601319 LUC7LQ9NQ29 371 aaKnown RBP17.33■□□□□ 0.36
HERC3-214ENST00000601319 LRRD1A4D1F6 860 aa17.32■□□□□ 0.36
HERC3-214ENST00000601319 C3orf70A6NLC5 250 aaPredicted RBP17.32■□□□□ 0.36
HERC3-214ENST00000601319 HTRA2O43464 458 aaPredicted RBP17.32■□□□□ 0.36
HERC3-214ENST00000601319 TNFSF14O43557 240 aa17.32■□□□□ 0.36
HERC3-214ENST00000601319 MX2P20592 715 aa17.32■□□□□ 0.36
HERC3-214ENST00000601319 CYLC1P35663 651 aaPredicted RBP17.32■□□□□ 0.36
HERC3-214ENST00000601319 MAGEA1P43355 309 aa17.32■□□□□ 0.36
HERC3-214ENST00000601319 SCNN1BP51168 640 aa17.32■□□□□ 0.36
HERC3-214ENST00000601319 PFN3P60673 137 aa17.32■□□□□ 0.36
HERC3-214ENST00000601319 POLR2LP62875 67 aaKnown RBP17.32■□□□□ 0.36
HERC3-214ENST00000601319 IFI16Q16666 785 aaKnown RBP17.32■□□□□ 0.36
HERC3-214ENST00000601319 ALG1LQ6GMV1 187 aa17.32■□□□□ 0.36
HERC3-214ENST00000601319 Q6ZSR6 202 aa17.32■□□□□ 0.36
HERC3-214ENST00000601319 RHOT1Q8IXI2 618 aa17.32■□□□□ 0.36
HERC3-214ENST00000601319 ADAMTS14Q8WXS8 1223 aa17.32■□□□□ 0.36
HERC3-214ENST00000601319 RAPGEF5Q92565 580 aa17.32■□□□□ 0.36
HERC3-214ENST00000601319 NSMCE3Q96MG7 304 aa17.32■□□□□ 0.36
HERC3-214ENST00000601319 RNF157Q96PX1 679 aa17.32■□□□□ 0.36
HERC3-214ENST00000601319 WRAP53Q9BUR4 548 aaKnown RBP17.32■□□□□ 0.36
HERC3-214ENST00000601319 TOR4AQ9NXH8 423 aa17.32■□□□□ 0.36
HERC3-214ENST00000601319 FTSJ1Q9UET6 329 aa17.32■□□□□ 0.36
HERC3-214ENST00000601319 AMACRQ9UHK6 382 aa17.32■□□□□ 0.36
HERC3-214ENST00000601319 NEUROG3Q9Y4Z2 214 aa17.32■□□□□ 0.36
HERC3-214ENST00000601319 A0A0A6YYK5 440 aaPredicted RBP17.31■□□□□ 0.36
HERC3-214ENST00000601319 SPTY2D1-AS1A0A0U1RR47 76 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms