RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 MYO6Q9UM54 1294 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 ITPR1Q14643 2758 aa17.17■□□□□ 0.34
SCAF1-204ENST00000601038 TSPAN11A1L157 253 aa17.16■□□□□ 0.34
SCAF1-204ENST00000601038 TMEM110-MUSTN1A8MSY1 372 aa17.16■□□□□ 0.34
SCAF1-204ENST00000601038 EIF3CLB5ME19 914 aaKnown RBP17.16■□□□□ 0.34
SCAF1-204ENST00000601038 LMO7DNF2Z398 122 aa17.16■□□□□ 0.34
SCAF1-204ENST00000601038 GOLGA6L22H0YM25 854 aa17.16■□□□□ 0.34
SCAF1-204ENST00000601038 PIGNO95427 931 aa17.16■□□□□ 0.34
SCAF1-204ENST00000601038 ANXA6P08133 673 aa17.16■□□□□ 0.34
SCAF1-204ENST00000601038 TGM2P21980 687 aa17.16■□□□□ 0.34
SCAF1-204ENST00000601038 RPIAP49247 311 aa17.16■□□□□ 0.34
SCAF1-204ENST00000601038 PEX5P50542 639 aa17.16■□□□□ 0.34
SCAF1-204ENST00000601038 ADKP55263 362 aaKnown RBP17.16■□□□□ 0.34
SCAF1-204ENST00000601038 GABREP78334 506 aa17.16■□□□□ 0.34
SCAF1-204ENST00000601038 PPARDQ03181 441 aa17.16■□□□□ 0.34
SCAF1-204ENST00000601038 ISXQ2M1V0 245 aa17.16■□□□□ 0.34
SCAF1-204ENST00000601038 FAXCQ5TGI0 409 aa17.16■□□□□ 0.34
SCAF1-204ENST00000601038 EFL1Q7Z2Z2 1120 aaKnown RBP17.16■□□□□ 0.34
SCAF1-204ENST00000601038 GLMNQ92990 594 aa17.16■□□□□ 0.34
SCAF1-204ENST00000601038 EXOC2Q96KP1 924 aa17.16■□□□□ 0.34
SCAF1-204ENST00000601038 EIF3CQ99613 913 aaKnown RBP17.16■□□□□ 0.34
SCAF1-204ENST00000601038 LRRC61Q9BV99 259 aa17.16■□□□□ 0.34
SCAF1-204ENST00000601038 PARVAQ9NVD7 372 aa17.16■□□□□ 0.34
SCAF1-204ENST00000601038 SHROOM3Q8TF72 1996 aa17.16■□□□□ 0.34
SCAF1-204ENST00000601038 J3KR12 359 aa17.15■□□□□ 0.34
SCAF1-204ENST00000601038 PRAMEF11O60813 436 aa17.15■□□□□ 0.34
SCAF1-204ENST00000601038 ATP1A3P13637 1013 aa17.15■□□□□ 0.34
SCAF1-204ENST00000601038 PSMA2P25787 234 aa17.15■□□□□ 0.34
SCAF1-204ENST00000601038 BLKP51451 505 aa17.15■□□□□ 0.34
SCAF1-204ENST00000601038 ERVPABLB-1P60509 514 aa17.15■□□□□ 0.34
SCAF1-204ENST00000601038 TLE3Q04726 772 aa17.15■□□□□ 0.34
SCAF1-204ENST00000601038 CCDC173Q0VFZ6 552 aa17.15■□□□□ 0.34
SCAF1-204ENST00000601038 C1orf61Q13536 156 aa17.15■□□□□ 0.34
SCAF1-204ENST00000601038 LRRC14Q15048 493 aa17.15■□□□□ 0.34
SCAF1-204ENST00000601038 IRF4Q15306 451 aa17.15■□□□□ 0.34
SCAF1-204ENST00000601038 WSCD2Q2TBF2 565 aa17.15■□□□□ 0.34
SCAF1-204ENST00000601038 C6orf132Q5T0Z8 1188 aa17.15■□□□□ 0.34
SCAF1-204ENST00000601038 PLEKHA7Q6IQ23 1121 aa17.15■□□□□ 0.34
SCAF1-204ENST00000601038 BRAT1Q6PJG6 821 aa17.15■□□□□ 0.34
SCAF1-204ENST00000601038 SPACA3Q8IXA5 215 aa17.15■□□□□ 0.34
SCAF1-204ENST00000601038 ZNF248Q8NDW4 579 aa17.15■□□□□ 0.34
SCAF1-204ENST00000601038 HIC2Q96JB3 615 aa17.15■□□□□ 0.34
SCAF1-204ENST00000601038 FCRL3Q96P31 734 aaPredicted RBP17.15■□□□□ 0.34
SCAF1-204ENST00000601038 TUBGCP5Q96RT8 1024 aa17.15■□□□□ 0.34
SCAF1-204ENST00000601038 CLPBQ9H078 707 aa17.15■□□□□ 0.34
SCAF1-204ENST00000601038 PCDH12Q9NPG4 1184 aa17.15■□□□□ 0.34
SCAF1-204ENST00000601038 GPATCH2LQ9NWQ4 482 aa17.15■□□□□ 0.34
SCAF1-204ENST00000601038 AP4E1Q9UPM8 1137 aa17.15■□□□□ 0.34
SCAF1-204ENST00000601038 PTPRQQ9UMZ3 2332 aa17.15■□□□□ 0.34
SCAF1-204ENST00000601038 RP1P56715 2156 aa17.14■□□□□ 0.33
SCAF1-204ENST00000601038 ARHGAP42A6NI28 874 aa17.14■□□□□ 0.33
SCAF1-204ENST00000601038 TK2O00142 265 aa17.14■□□□□ 0.33
SCAF1-204ENST00000601038 EEF2KO00418 725 aaKnown RBP17.14■□□□□ 0.33
SCAF1-204ENST00000601038 YY2O15391 372 aa17.14■□□□□ 0.33
SCAF1-204ENST00000601038 TEX33O43247 280 aa17.14■□□□□ 0.33
SCAF1-204ENST00000601038 BUB1BO60566 1050 aaPredicted RBP17.14■□□□□ 0.33
SCAF1-204ENST00000601038 TCEA3O75764 348 aa17.14■□□□□ 0.33
SCAF1-204ENST00000601038 TSHRP16473 764 aa17.14■□□□□ 0.33
SCAF1-204ENST00000601038 CSNK1DP48730 415 aa17.14■□□□□ 0.33
SCAF1-204ENST00000601038 PCBP4P57723 403 aaKnown RBP17.14■□□□□ 0.33
SCAF1-204ENST00000601038 AGERQ15109 404 aa17.14■□□□□ 0.33
SCAF1-204ENST00000601038 CCDC183Q5T5S1 534 aa17.14■□□□□ 0.33
SCAF1-204ENST00000601038 ERMARDQ5T6L9 678 aa17.14■□□□□ 0.33
SCAF1-204ENST00000601038 ERAP2Q6P179 960 aa17.14■□□□□ 0.33
SCAF1-204ENST00000601038 SLC35F3Q8IY50 421 aa17.14■□□□□ 0.33
SCAF1-204ENST00000601038 AOPEPQ8N6M6 819 aa17.14■□□□□ 0.33
SCAF1-204ENST00000601038 ARFGAP1Q8N6T3 406 aa17.14■□□□□ 0.33
SCAF1-204ENST00000601038 NAT6Q93015 286 aa17.14■□□□□ 0.33
SCAF1-204ENST00000601038 CELF6Q96J87 481 aaKnown RBP17.14■□□□□ 0.33
SCAF1-204ENST00000601038 LGMNQ99538 433 aa17.14■□□□□ 0.33
SCAF1-204ENST00000601038 SLC39A8Q9C0K1 460 aa17.14■□□□□ 0.33
SCAF1-204ENST00000601038 DHX35Q9H5Z1 703 aaKnown RBP17.14■□□□□ 0.33
SCAF1-204ENST00000601038 COQ6Q9Y2Z9 468 aa17.14■□□□□ 0.33
SCAF1-204ENST00000601038 TMEM191CA6NGB0 347 aa17.13■□□□□ 0.33
SCAF1-204ENST00000601038 TMCO5BA8MYB1 307 aa17.13■□□□□ 0.33
SCAF1-204ENST00000601038 MUSKO15146 869 aa17.13■□□□□ 0.33
SCAF1-204ENST00000601038 PALMO75781 387 aa17.13■□□□□ 0.33
SCAF1-204ENST00000601038 MBD3O95983 291 aa17.13■□□□□ 0.33
SCAF1-204ENST00000601038 C6P13671 934 aa17.13■□□□□ 0.33
SCAF1-204ENST00000601038 PAPOLAP51003 745 aaKnown RBP17.13■□□□□ 0.33
SCAF1-204ENST00000601038 HK3P52790 923 aa17.13■□□□□ 0.33
SCAF1-204ENST00000601038 ELOCQ15369 112 aa17.13■□□□□ 0.33
SCAF1-204ENST00000601038 CA9Q16790 459 aa17.13■□□□□ 0.33
SCAF1-204ENST00000601038 PERM1Q5SV97 790 aa17.13■□□□□ 0.33
SCAF1-204ENST00000601038 CFAP58Q5T655 872 aa17.13■□□□□ 0.33
SCAF1-204ENST00000601038 AFMIDQ63HM1 303 aa17.13■□□□□ 0.33
SCAF1-204ENST00000601038 ESRP1Q6NXG1 681 aaKnown RBP17.13■□□□□ 0.33
SCAF1-204ENST00000601038 LVRNQ6Q4G3 990 aa17.13■□□□□ 0.33
SCAF1-204ENST00000601038 IGF2-ASQ6U949 168 aa17.13■□□□□ 0.33
SCAF1-204ENST00000601038 RBM44Q6ZP01 1051 aaKnown RBP17.13■□□□□ 0.33
SCAF1-204ENST00000601038 GPR155Q7Z3F1 870 aa17.13■□□□□ 0.33
SCAF1-204ENST00000601038 SRLQ86TD4 932 aa17.13■□□□□ 0.33
SCAF1-204ENST00000601038 CAMK1DQ8IU85 385 aa17.13■□□□□ 0.33
SCAF1-204ENST00000601038 SDR16C5Q8N3Y7 309 aa17.13■□□□□ 0.33
SCAF1-204ENST00000601038 FSTL5Q8N475 847 aaPredicted RBP17.13■□□□□ 0.33
SCAF1-204ENST00000601038 LSM14AQ8ND56 463 aaKnown RBP17.13■□□□□ 0.33
SCAF1-204ENST00000601038 WDR48Q8TAF3 677 aa17.13■□□□□ 0.33
SCAF1-204ENST00000601038 FNIP1Q8TF40 1166 aa17.13■□□□□ 0.33
SCAF1-204ENST00000601038 SCG3Q8WXD2 468 aaKnown RBP17.13■□□□□ 0.33
SCAF1-204ENST00000601038 NAT10Q9H0A0 1025 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms