RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 PAF1Q8N7H5 531 aa20.63■□□□□ 0.89
PNKP-215ENST00000600910 UBXN4Q92575 508 aa20.63■□□□□ 0.89
PNKP-215ENST00000600910 ECHDC3Q96DC8 303 aa20.63■□□□□ 0.89
PNKP-215ENST00000600910 FEM1CQ96JP0 617 aa20.63■□□□□ 0.89
PNKP-215ENST00000600910 TRIB3Q96RU7 358 aa20.63■□□□□ 0.89
PNKP-215ENST00000600910 TBL1YQ9BQ87 522 aa20.63■□□□□ 0.89
PNKP-215ENST00000600910 SLC6A17Q9H1V8 727 aa20.63■□□□□ 0.89
PNKP-215ENST00000600910 EPC1Q9H2F5 836 aa20.63■□□□□ 0.89
PNKP-215ENST00000600910 POLMQ9NP87 494 aaPredicted RBP20.63■□□□□ 0.89
PNKP-215ENST00000600910 GRHL1Q9NZI5 618 aa20.63■□□□□ 0.89
PNKP-215ENST00000600910 DLGAP2Q9P1A6 1054 aa20.63■□□□□ 0.89
PNKP-215ENST00000600910 WHRNQ9P202 907 aa20.63■□□□□ 0.89
PNKP-215ENST00000600910 ARIH1Q9Y4X5 557 aaPredicted RBP20.63■□□□□ 0.89
PNKP-215ENST00000600910 LOC285095A0A1B0GVY8 99 aa20.62■□□□□ 0.89
PNKP-215ENST00000600910 TP73O15350 636 aa20.62■□□□□ 0.89
PNKP-215ENST00000600910 SUN1O94901 812 aa20.62■□□□□ 0.89
PNKP-215ENST00000600910 PGLSO95336 258 aa20.62■□□□□ 0.89
PNKP-215ENST00000600910 PRLP01236 227 aa20.62■□□□□ 0.89
PNKP-215ENST00000600910 GRIA1P42261 906 aa20.62■□□□□ 0.89
PNKP-215ENST00000600910 TNNT3P45378 269 aaPredicted RBP20.62■□□□□ 0.89
PNKP-215ENST00000600910 RPS14P62263 151 aaKnown RBP20.62■□□□□ 0.89
PNKP-215ENST00000600910 CDK16Q00536 496 aa20.62■□□□□ 0.89
PNKP-215ENST00000600910 CALCOCO2Q13137 446 aa20.62■□□□□ 0.89
PNKP-215ENST00000600910 GALNT3Q14435 633 aa20.62■□□□□ 0.89
PNKP-215ENST00000600910 CST6Q15828 149 aa20.62■□□□□ 0.89
PNKP-215ENST00000600910 FAM46CQ5VWP2 391 aa20.62■□□□□ 0.89
PNKP-215ENST00000600910 NAPEPLDQ6IQ20 393 aa20.62■□□□□ 0.89
PNKP-215ENST00000600910 HIBCHQ6NVY1 386 aaPredicted RBP20.62■□□□□ 0.89
PNKP-215ENST00000600910 RANBP10Q6VN20 620 aa20.62■□□□□ 0.89
PNKP-215ENST00000600910 ZSWIM9Q86XI8 627 aa20.62■□□□□ 0.89
PNKP-215ENST00000600910 BBOF1Q8ND07 529 aa20.62■□□□□ 0.89
PNKP-215ENST00000600910 ANAPC5Q9UJX4 755 aa20.62■□□□□ 0.89
PNKP-215ENST00000600910 EPOP01588 193 aa20.61■□□□□ 0.89
PNKP-215ENST00000600910 MAGEA9P43362 315 aa20.61■□□□□ 0.89
PNKP-215ENST00000600910 CHRNA4P43681 627 aa20.61■□□□□ 0.89
PNKP-215ENST00000600910 MORF4L2Q15014 288 aa20.61■□□□□ 0.89
PNKP-215ENST00000600910 HOOK3Q86VS8 718 aa20.61■□□□□ 0.89
PNKP-215ENST00000600910 SLC25A41Q8N5S1 370 aa20.61■□□□□ 0.89
PNKP-215ENST00000600910 LPCAT1Q8NF37 534 aa20.61■□□□□ 0.89
PNKP-215ENST00000600910 PRCCQ92733 491 aaPredicted RBP20.61■□□□□ 0.89
PNKP-215ENST00000600910 PPP1R16AQ96I34 528 aa20.61■□□□□ 0.89
PNKP-215ENST00000600910 MRGPRX1Q96LB2 322 aa20.61■□□□□ 0.89
PNKP-215ENST00000600910 IER2Q9BTL4 223 aa20.61■□□□□ 0.89
PNKP-215ENST00000600910 ADGRE3Q9BY15 652 aa20.61■□□□□ 0.89
PNKP-215ENST00000600910 GOLGA8MH3BSY2 632 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 NDC80O14777 642 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 MID1O15344 667 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 NDST3O95803 873 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 ADH1BP00325 375 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 CPP00450 1065 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 ATXN1LP0C7T5 689 aaKnown RBP20.6■□□□□ 0.89
PNKP-215ENST00000600910 NDUFV2P19404 249 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 ITGB7P26010 798 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 SLC8A1P32418 973 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 CLCN5P51795 746 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 SLC1A5Q15758 541 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 ERCC6LQ2NKX8 1250 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 SIRPB2Q5JXA9 342 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 BRAT1Q6PJG6 821 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 PPP1R21Q6ZMI0 780 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 LINC00523Q86TU6 105 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 ARRDC3Q96B67 414 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 RMDN1Q96DB5 314 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 ANKZF1Q9H8Y5 726 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 GDF3Q9NR23 364 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 FAM114A2Q9NRY5 505 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 PIH1D1Q9NWS0 290 aaKnown RBP20.6■□□□□ 0.89
PNKP-215ENST00000600910 DKK3Q9UBP4 350 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 SHOC2Q9UQ13 582 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 A0A1W2PQ67 120 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 TSPAN11A1L157 253 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 C16orf96A6NNT2 1141 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 GABRG2P18507 467 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 C5AR1P21730 350 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 EPHB1P54762 984 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 PLTPP55058 493 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 DENND5AQ6IQ26 1287 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 ZNF534Q76KX8 674 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 PARS2Q7L3T8 475 aaKnown RBP20.6■□□□□ 0.89
PNKP-215ENST00000600910 IFT20Q8IY31 132 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 TSTD1Q8NFU3 115 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 OR52K1Q8NGK4 314 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 HCAR2Q8TDS4 363 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 HMGB4Q8WW32 186 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 PIH1D2Q8WWB5 315 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 IFT81Q8WYA0 676 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 SPOCK2Q92563 424 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 ART4Q93070 314 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 PBXIP1Q96AQ6 731 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 SIPA1Q96FS4 1042 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 HHIPQ96QV1 700 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 DYRK4Q9NR20 520 aa20.6■□□□□ 0.89
PNKP-215ENST00000600910 ANKRD66B4E2M5 251 aa20.59■□□□□ 0.89
PNKP-215ENST00000600910 SMAPO00193 183 aa20.59■□□□□ 0.89
PNKP-215ENST00000600910 PLK4O00444 970 aa20.59■□□□□ 0.89
PNKP-215ENST00000600910 DNTTP04053 509 aa20.59■□□□□ 0.89
PNKP-215ENST00000600910 HLA-DPA1P20036 260 aa20.59■□□□□ 0.89
PNKP-215ENST00000600910 RPL26P61254 145 aaKnown RBP20.59■□□□□ 0.89
PNKP-215ENST00000600910 SARNPP82979 210 aaKnown RBP20.59■□□□□ 0.89
PNKP-215ENST00000600910 AADATQ8N5Z0 425 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms