RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 CD300LGQ6UXG3 332 aa20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 TICAM1Q8IUC6 712 aa20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 SCML4Q8N228 414 aa20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 PHF21BQ96EK2 531 aa20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 SMOC2Q9H3U7 446 aa20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 TRPC7Q9HCX4 862 aa20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 IPO11Q9UI26 975 aaKnown RBP20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 HS3ST4Q9Y661 456 aa20.38■□□□□ 0.85
SHKBP1-225ENST00000600733 TRPM7Q96QT4 1865 aa20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 PRSS51A0A1B0GVH4 220 aa20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 AP1G1O43747 822 aa20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 SNUPNO95149 360 aaKnown RBP20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 CCDC166P0CW27 439 aa20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 HSPA1AP0DMV8 641 aaKnown RBP20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 HSPA1BP0DMV9 641 aaKnown RBP20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 CALRP27797 417 aaKnown RBP20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 GDF6Q6KF10 455 aaPredicted RBP20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 TIGD7Q6NT04 549 aaPredicted RBP20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 SCD5Q86SK9 330 aa20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 GALNT4Q8N4A0 578 aa20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 RTL3Q8N8U3 475 aaKnown RBP20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 CNBD2Q96M20 576 aa20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 MRPL1Q9BYD6 325 aaKnown RBP20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 NMUR1Q9HB89 426 aa20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 BCAP29Q9UHQ4 241 aa20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 MTF2Q9Y483 593 aaPredicted RBP20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 PCDHGA7Q9Y5G6 932 aa20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 AP4B1Q9Y6B7 739 aa20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 CCL22O00626 93 aa20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 IPO13O94829 963 aaKnown RBP20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 CHRM1P11229 460 aaPredicted RBP20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 KPNA2P52292 529 aaKnown RBP20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 OVOS1Q6IE37 1185 aa20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 LDB1Q86U70 411 aaPredicted RBP20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 ANKRD49Q8WVL7 239 aa20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 NCSTNQ92542 709 aa20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 TRIM62Q9BVG3 475 aa20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 SENP6Q9GZR1 1112 aaPredicted RBP20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 NOL6Q9H6R4 1146 aaKnown RBP20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 AK5Q9Y6K8 562 aa20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 NLRC5Q86WI3 1866 aa20.37■□□□□ 0.85
SHKBP1-225ENST00000600733 GRIK1P39086 918 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 RAB27AP51159 221 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 PSME3P61289 254 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 PFKPQ01813 784 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 AFMIDQ63HM1 303 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 KDELC1Q6UW63 502 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 PTAR1Q7Z6K3 402 aaPredicted RBP20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 TFAP2DQ7Z6R9 452 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 CUZD1Q86UP6 607 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 PIP4K2CQ8TBX8 421 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 DLG3Q92796 817 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 PRKD2Q9BZL6 878 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 PCDHAC1Q9H158 963 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 CCDC167Q9P0B6 97 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 TTC24A2A3L6 582 aaPredicted RBP20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 E7ENX8 843 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 MGEA5O60502 916 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 RNASEH2AO75792 299 aaKnown RBP20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 MT-CO1P00395 513 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 CYP11A1P05108 521 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 PDAP1Q13442 181 aaKnown RBP20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 IRF5Q13568 498 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 RBBP5Q15291 538 aaKnown RBP20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 C6orf52Q5T4I8 152 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 AGAP9Q5VTM2 703 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 CXCL17Q6UXB2 119 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 CHSY3Q70JA7 882 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 BEND5Q7L4P6 421 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 ADCY4Q8NFM4 1077 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 NAT14Q8WUY8 206 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 KLHL5Q96PQ7 755 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 NT5MQ9NPB1 228 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 TBC1D13Q9NVG8 400 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 RAB26Q9ULW5 256 aa20.36■□□□□ 0.85
SHKBP1-225ENST00000600733 HEATR9A2RTY3 570 aa20.35■□□□□ 0.85
SHKBP1-225ENST00000600733 TRIM38O00635 465 aa20.35■□□□□ 0.85
SHKBP1-225ENST00000600733 LTA4HP09960 611 aaKnown RBP20.35■□□□□ 0.85
SHKBP1-225ENST00000600733 TSPAN8P19075 237 aa20.35■□□□□ 0.85
SHKBP1-225ENST00000600733 CDKL1Q00532 357 aa20.35■□□□□ 0.85
SHKBP1-225ENST00000600733 ITKQ08881 620 aa20.35■□□□□ 0.85
SHKBP1-225ENST00000600733 IL23RQ5VWK5 629 aa20.35■□□□□ 0.85
SHKBP1-225ENST00000600733 KIAA0408Q6ZU52 694 aa20.35■□□□□ 0.85
SHKBP1-225ENST00000600733 TMEM126BQ8IUX1 230 aa20.35■□□□□ 0.85
SHKBP1-225ENST00000600733 OR13J1Q8NGT2 312 aa20.35■□□□□ 0.85
SHKBP1-225ENST00000600733 ATP6V1E2Q96A05 226 aa20.35■□□□□ 0.85
SHKBP1-225ENST00000600733 Q9H521 79 aa20.35■□□□□ 0.85
SHKBP1-225ENST00000600733 MEAF6Q9HAF1 191 aa20.35■□□□□ 0.85
SHKBP1-225ENST00000600733 OSER1Q9NX31 292 aa20.35■□□□□ 0.85
SHKBP1-225ENST00000600733 APPL1Q9UKG1 709 aa20.35■□□□□ 0.85
SHKBP1-225ENST00000600733 TDRD15B5MCY1 1934 aaKnown RBP20.35■□□□□ 0.85
SHKBP1-225ENST00000600733 MYOCOSA0A1B0GUC4 107 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 A0A1W2PQH9 124 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 J3KR12 359 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 FBP2O00757 339 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 TNFRSF10BO14763 440 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 PEX11BO96011 259 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 OR4Q2P0C623 313 aa20.34■□□□□ 0.85
SHKBP1-225ENST00000600733 CD86P42081 329 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms