RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 MPP3Q13368 585 aa20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 OLIG2Q13516 323 aa20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 PRPSAP1Q14558 356 aa20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 ARMC12Q5T9G4 340 aa20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 AGBL4Q5VU57 503 aa20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 KDELC2Q7Z4H8 507 aa20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 FAM124AQ86V42 546 aa20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 WDR5BQ86VZ2 330 aa20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 JAMLQ86YT9 394 aa20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 IPMKQ8NFU5 416 aa20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 PIH1D2Q8WWB5 315 aa20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 PPP1R16AQ96I34 528 aa20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 RUNDC3BQ96NL0 473 aa20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 TRIB3Q96RU7 358 aa20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 OMDQ99983 421 aa20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 CARD6Q9BX69 1037 aa20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 HDAC8Q9BY41 377 aa20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 DYRK4Q9NR20 520 aa20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 RAB6BQ9NRW1 208 aa20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 VPS45Q9NRW7 570 aa20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 RAPGEFL1Q9UHV5 662 aa20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 EML5Q05BV3 1969 aa20.17■□□□□ 0.82
SHKBP1-222ENST00000600320 IGHV1OR15-9A0A0B4J2B8 117 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 SPINT1O43278 529 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 ANXA9O76027 345 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 GAS8O95995 478 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 CPP00450 1065 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 IGLV3-19P01714 112 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 SP9P0CG40 484 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 ADRB3P13945 408 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 FDFT1P37268 417 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 NEK3P51956 506 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 TAS2R38P59533 333 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 DR1Q01658 176 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 GPS1Q13098 491 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 PTK6Q13882 451 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 SPARCL1Q14515 664 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 PTPRRQ15256 657 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 SYCP2LQ5T4T6 812 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 CFAP58Q5T655 872 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 KCTD11Q693B1 232 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 BRAT1Q6PJG6 821 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 USP30Q70CQ3 517 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 FAM160A2Q8N612 972 aaPredicted RBP20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 HCAR2Q8TDS4 363 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 NELL1Q92832 810 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 TRIM51Q9BSJ1 452 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 FICDQ9BVA6 458 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 L2HGDHQ9H9P8 463 aa20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 FEZ2Q9UHY8 353 aaPredicted RBP20.16■□□□□ 0.82
SHKBP1-222ENST00000600320 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 CCDC163A0A0D9SF12 145 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 LOC285095A0A1B0GVY8 99 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 UPK3BL1B0FP48 263 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 UPK3BL2E5RIL1 263 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 RAD51CO43502 376 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 AGTP01019 485 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 ADRA1AP35348 466 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 CHRNA4P43681 627 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 TERF1P54274 439 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 SEMG2Q02383 582 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 CDK18Q07002 472 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 SRSF5Q13243 272 aaKnown RBP20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 SEMA5AQ13591 1074 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 DHX34Q14147 1143 aaKnown RBP20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 GALNT3Q14435 633 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 PPP1R7Q15435 360 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 UGP2Q16851 508 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 FBXL19Q6PCT2 694 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 TTC7BQ86TV6 843 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 LONP2Q86WA8 852 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 PAF1Q8N7H5 531 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 PDCD7Q8N8D1 485 aaKnown RBP20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 LPCAT1Q8NF37 534 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 SPOCK2Q92563 424 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 FEM1CQ96JP0 617 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 APOL2Q9BQE5 337 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 FZD4Q9ULV1 537 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 ITM2BQ9Y287 266 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 NCKAP1Q9Y2A7 1128 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 AAR2Q9Y312 384 aaKnown RBP20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 NUMA1Q14980 2115 aa20.15■□□□□ 0.82
SHKBP1-222ENST00000600320 CTAGE15A4D2H0 777 aa20.14■□□□□ 0.81
SHKBP1-222ENST00000600320 ZNF217O75362 1048 aa20.14■□□□□ 0.81
SHKBP1-222ENST00000600320 NDST3O95803 873 aa20.14■□□□□ 0.81
SHKBP1-222ENST00000600320 ATXN1LP0C7T5 689 aaKnown RBP20.14■□□□□ 0.81
SHKBP1-222ENST00000600320 CTAGE8P0CG41 777 aa20.14■□□□□ 0.81
SHKBP1-222ENST00000600320 CTPS1P17812 591 aa20.14■□□□□ 0.81
SHKBP1-222ENST00000600320 CA4P22748 312 aa20.14■□□□□ 0.81
SHKBP1-222ENST00000600320 ACSL1P33121 698 aa20.14■□□□□ 0.81
SHKBP1-222ENST00000600320 NUBP1P53384 320 aa20.14■□□□□ 0.81
SHKBP1-222ENST00000600320 ADPRHP54922 357 aa20.14■□□□□ 0.81
SHKBP1-222ENST00000600320 BASP1P80723 227 aaKnown RBP20.14■□□□□ 0.81
SHKBP1-222ENST00000600320 QPCTQ16769 361 aa20.14■□□□□ 0.81
SHKBP1-222ENST00000600320 C4orf22Q6V702 233 aa20.14■□□□□ 0.81
SHKBP1-222ENST00000600320 CTAGE6Q86UF2 777 aa20.14■□□□□ 0.81
SHKBP1-222ENST00000600320 KBTBD6Q86V97 674 aa20.14■□□□□ 0.81
SHKBP1-222ENST00000600320 CTAGE4Q8IX94 777 aa20.14■□□□□ 0.81
SHKBP1-222ENST00000600320 NOA1Q8NC60 698 aaKnown RBP20.14■□□□□ 0.81
SHKBP1-222ENST00000600320 LRRN4CLQ8ND94 238 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms