RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 VPS41P49754 854 aa12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 RPL26P61254 145 aaKnown RBP12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 CDK18Q07002 472 aa12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 CNTN1Q12860 1018 aa12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 POM121L1PQ3SYA9 428 aa12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 PIP5KL1Q5T9C9 394 aa12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 ARMC12Q5T9G4 340 aa12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 KIAA1324Q6UXG2 1013 aaKnown RBP12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 USP30Q70CQ3 517 aa12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 ERN2Q76MJ5 926 aaKnown RBP12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 PARS2Q7L3T8 475 aaKnown RBP12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 CACUL1Q86Y37 369 aa12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 PPP1R16AQ96I34 528 aa12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 FEM1CQ96JP0 617 aa12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 LRRC40Q9H9A6 602 aa12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 ITM2CQ9NQX7 267 aa12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 EIF2B3Q9NR50 452 aaKnown RBP12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 SERGEFQ9UGK8 458 aa12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 RPL26L1Q9UNX3 145 aaKnown RBP12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 CHKBQ9Y259 395 aa12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 PPIL1Q9Y3C6 166 aa12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 PCDHB9Q9Y5E1 797 aa12.75□□□□□ -0.37
CHMP2A-206ENST00000600118 ATG2BQ96BY7 2078 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 CCDC163A0A0D9SF12 145 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 GOLGA6CA6NDK9 693 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 GOLGA6BA6NDN3 693 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 PSMD3O43242 534 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 LAMTOR5O43504 91 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 NDST3O95803 873 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 GOLGA6DP0CG33 693 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 TPSB2P20231 275 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 P2RY2P41231 377 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 ABL2P42684 1182 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 TPMTP51580 245 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 SUOXP51687 545 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 NEK3P51956 506 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 KCNJ11Q14654 390 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 TPSAB1Q15661 275 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 UGP2Q16851 508 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 TTC31Q49AM3 519 aaPredicted RBP12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 GLE1Q53GS7 698 aaKnown RBP12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 AGBL4Q5VU57 503 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 DUPD1Q68J44 220 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 DENND5AQ6IQ26 1287 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 C8orf74Q6P047 294 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 HDDC3Q8N4P3 179 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 PDCD7Q8N8D1 485 aaKnown RBP12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 IPMKQ8NFU5 416 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 CPT1BQ92523 772 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 NELL1Q92832 810 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 LRRC45Q96CN5 670 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 MCCC1Q96RQ3 725 aaPredicted RBP12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 ERP44Q9BS26 406 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 LRRC1Q9BTT6 524 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 FICDQ9BVA6 458 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 C1QTNF1Q9BXJ1 281 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 ARNT2Q9HBZ2 717 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 RRAGDQ9NQL2 400 aaPredicted RBP12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 FBXL12Q9NXK8 326 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 GOLGA6AQ9NYA3 693 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 ASIC3Q9UHC3 531 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 FBXO4Q9UKT5 387 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 FZD4Q9ULV1 537 aa12.74□□□□□ -0.37
CHMP2A-206ENST00000600118 A0A1W2PP55 124 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 TCRBV7S3A2A0A539 114 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 UPK3BL1B0FP48 263 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 C10orf142B7Z368 130 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 UPK3BL2E5RIL1 263 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 PLK4O00444 970 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 DNALI1O14645 258 aaPredicted RBP12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 AREL1O15033 823 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 TP73O15350 636 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 SLC7A4O43246 635 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 SPINT1O43278 529 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 USP12O75317 370 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 RNASEH2AO75792 299 aaKnown RBP12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 CPP00450 1065 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 AGTP01019 485 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 APRTP07741 180 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 ADRB3P13945 408 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 HLA-DPA1P20036 260 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 ADCY8P40145 1251 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 GRIA4P48058 902 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 PXNP49023 591 aaPredicted RBP12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 NUBP1P53384 320 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 DRG2P55039 364 aaKnown RBP12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 TAS2R38P59533 333 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 POLR2LP62875 67 aaKnown RBP12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 BASP1P80723 227 aaKnown RBP12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 CDK16Q00536 496 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 DMWDQ09019 674 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 SFSWAPQ12872 951 aaKnown RBP12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 OLIG2Q13516 323 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 SPARCL1Q14515 664 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 SLC1A5Q15758 541 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 PCSK7Q16549 785 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 QPCTQ16769 361 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 MAP7D1Q3KQU3 841 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 TMEM31Q5JXX7 168 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 RNASEH2BQ5TBB1 312 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms