RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 LY6G6EA0A0G2JKS1 128 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 TSPAN11A1L157 253 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 TMEM110-MUSTN1A8MSY1 372 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 J3KR12 359 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 DFFAO00273 331 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 PRAMEF11O60813 436 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 USP12O75317 370 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 CSO75390 466 aaKnown RBP9.89□□□□□ -0.83
VRK3-216ENST00000599342 FTLP02792 175 aaPredicted RBP9.89□□□□□ -0.83
VRK3-216ENST00000599342 ANXA6P08133 673 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 C6P13671 934 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 ITIH2P19823 946 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 ITPKBP27987 946 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 HTR1BP28222 390 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 SERPINA4P29622 427 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 EIF4A3P38919 411 aaKnown RBP9.89□□□□□ -0.83
VRK3-216ENST00000599342 PAPOLAP51003 745 aaKnown RBP9.89□□□□□ -0.83
VRK3-216ENST00000599342 ZNF135P52742 658 aaPredicted RBP9.89□□□□□ -0.83
VRK3-216ENST00000599342 GABREP78334 506 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 PPARDQ03181 441 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 KLHL30Q0D2K2 578 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 UGP2Q16851 508 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 TMEM52BQ4KMG9 183 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 PPP6R3Q5H9R7 873 aaPredicted RBP9.89□□□□□ -0.83
VRK3-216ENST00000599342 CDCP2Q5VXM1 449 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 ESRP1Q6NXG1 681 aaKnown RBP9.89□□□□□ -0.83
VRK3-216ENST00000599342 GUSBP11Q6P575 273 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 RFX8Q6ZV50 586 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 EFL1Q7Z2Z2 1120 aaKnown RBP9.89□□□□□ -0.83
VRK3-216ENST00000599342 LSMEM2Q8N112 164 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 ATL2Q8NHH9 583 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 TPCN2Q8NHX9 752 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 FNIP1Q8TF40 1166 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 NAT6Q93015 286 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 ZNF653Q96CK0 615 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 TRIM11Q96F44 468 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 CRELD1Q96HD1 420 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 LRRC61Q9BV99 259 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 SLC39A8Q9C0K1 460 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 ATP13A3Q9H7F0 1226 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 ZWILCHQ9H900 591 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 MRPL47Q9HD33 250 aaKnown RBP9.89□□□□□ -0.83
VRK3-216ENST00000599342 PCDH12Q9NPG4 1184 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 MBNL1Q9NR56 388 aaKnown RBP9.89□□□□□ -0.83
VRK3-216ENST00000599342 CNOT8Q9UFF9 292 aaKnown RBP9.89□□□□□ -0.83
VRK3-216ENST00000599342 COQ6Q9Y2Z9 468 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 U3KQA8 63 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 FAM208BQ5VWN6 2430 aa9.89□□□□□ -0.83
VRK3-216ENST00000599342 GOLGA4Q13439 2230 aaKnown RBP9.88□□□□□ -0.83
VRK3-216ENST00000599342 A0A1W2PQC6 194 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 EME2A4GXA9 379 aaPredicted RBP9.88□□□□□ -0.83
VRK3-216ENST00000599342 TMEM191CA6NGB0 347 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 LMO7DNF2Z398 122 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 MUSKO15146 869 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 LZTS3O60299 673 aaPredicted RBP9.88□□□□□ -0.83
VRK3-216ENST00000599342 SERPINC1P01008 464 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 MPOP05164 745 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 PCCBP05166 539 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 ALPIP09923 528 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 MYBL1P10243 752 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 GZMAP12544 262 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 CTSEP14091 401 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 ERCC2P18074 760 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 MIPP30301 263 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 CSNK1DP48730 415 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 ZNF165P49910 485 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 PEX5P50542 639 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 ADKP55263 362 aaKnown RBP9.88□□□□□ -0.83
VRK3-216ENST00000599342 PCBP4P57723 403 aaKnown RBP9.88□□□□□ -0.83
VRK3-216ENST00000599342 BCL2L1Q07817 233 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 CCDC173Q0VFZ6 552 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 C1orf61Q13536 156 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 RFTN1Q14699 578 aaPredicted RBP9.88□□□□□ -0.83
VRK3-216ENST00000599342 ACAP1Q15027 740 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 ELOCQ15369 112 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 CA9Q16790 459 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 SOWAHCQ53LP3 525 aaPredicted RBP9.88□□□□□ -0.83
VRK3-216ENST00000599342 C6orf132Q5T0Z8 1188 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 CAVIN1Q6NZI2 390 aaKnown RBP9.88□□□□□ -0.83
VRK3-216ENST00000599342 ZNF571Q7Z3V5 609 aaPredicted RBP9.88□□□□□ -0.83
VRK3-216ENST00000599342 CAMK1DQ8IU85 385 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 PSTKQ8IV42 348 aaKnown RBP9.88□□□□□ -0.83
VRK3-216ENST00000599342 FSTL5Q8N475 847 aaPredicted RBP9.88□□□□□ -0.83
VRK3-216ENST00000599342 TSEN2Q8NCE0 465 aaKnown RBP9.88□□□□□ -0.83
VRK3-216ENST00000599342 ZNF248Q8NDW4 579 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 SCG3Q8WXD2 468 aaKnown RBP9.88□□□□□ -0.83
VRK3-216ENST00000599342 ZNF578Q96N58 590 aaPredicted RBP9.88□□□□□ -0.83
VRK3-216ENST00000599342 PEBP4Q96S96 227 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 KCTD15Q96SI1 283 aaPredicted RBP9.88□□□□□ -0.83
VRK3-216ENST00000599342 LGMNQ99538 433 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 BOCQ9BWV1 1114 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 TCEAL2Q9H3H9 227 aaPredicted RBP9.88□□□□□ -0.83
VRK3-216ENST00000599342 SYNDIG1Q9H7V2 258 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 AIPL1Q9NZN9 384 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 MYO1AQ9UBC5 1043 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 ATP8A1Q9Y2Q0 1164 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 CELSR3Q9NYQ7 3312 aa9.88□□□□□ -0.83
VRK3-216ENST00000599342 PKD1L2Q7Z442 2459 aa9.87□□□□□ -0.83
VRK3-216ENST00000599342 A0A1B0GTH6 734 aa9.87□□□□□ -0.83
VRK3-216ENST00000599342 H3BRJ5 948 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms