RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 OMDQ99983 421 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 TRIM51Q9BSJ1 452 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 GPR174Q9BXC1 333 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 PCDH9Q9HC56 1237 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 NT5MQ9NPB1 228 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 SEPT3Q9UH03 358 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 TRHDEQ9UKU6 1024 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 ASCC3Q8N3C0 2202 aaKnown RBP15.15■□□□□ 0.02
TRIM28-207ENST00000597136 CFAP54Q96N23 3096 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 OPHN1O60890 802 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 PIGNO95427 931 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 PRNPP04156 253 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 UGT2B4P06133 528 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 RPL22P35268 128 aaKnown RBP15.15■□□□□ 0.02
TRIM28-207ENST00000597136 MMP13P45452 471 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 SCNN1BP51168 640 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 SLC7A5Q01650 507 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 RPL6Q02878 288 aaKnown RBP15.15■□□□□ 0.02
TRIM28-207ENST00000597136 IHHQ14623 411 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 TTC31Q49AM3 519 aaPredicted RBP15.15■□□□□ 0.02
TRIM28-207ENST00000597136 FAM46CQ5VWP2 391 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 CCDC70Q6NSX1 233 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 USP30Q70CQ3 517 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 ARMCX6Q7L4S7 300 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 ASCL5Q7RTU5 278 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 SLC41A1Q8IVJ1 513 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.15■□□□□ 0.02
TRIM28-207ENST00000597136 CNTD1Q8N815 330 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 SPACA7Q96KW9 195 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 TEKT5Q96M29 485 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 KLHL32Q96NJ5 620 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 AGAP3Q96P47 875 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 C6orf106Q9H6K1 298 aaPredicted RBP15.15■□□□□ 0.02
TRIM28-207ENST00000597136 RBM22Q9NW64 420 aaKnown RBP eCLIP15.15■□□□□ 0.021e-6■■■□□ 19
TRIM28-207ENST00000597136 SCML1Q9UN30 329 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 SMG5Q9UPR3 1016 aaKnown RBP15.15■□□□□ 0.02
TRIM28-207ENST00000597136 NCKAP1Q9Y2A7 1128 aa15.15■□□□□ 0.02
TRIM28-207ENST00000597136 DMXL1Q9Y485 3027 aa15.14■□□□□ 0.01
TRIM28-207ENST00000597136 FAM47DPA6NHR8 397 aa15.14■□□□□ 0.01
TRIM28-207ENST00000597136 C1QTNF3-AMACRE9PGA6 284 aa15.14■□□□□ 0.01
TRIM28-207ENST00000597136 RHOXF2BP0C7M4 288 aa15.14■□□□□ 0.01
TRIM28-207ENST00000597136 CR2P20023 1033 aa15.14■□□□□ 0.01
TRIM28-207ENST00000597136 OXTRP30559 389 aa15.14■□□□□ 0.01
TRIM28-207ENST00000597136 ACTN2P35609 894 aa15.14■□□□□ 0.01
TRIM28-207ENST00000597136 TAS2R38P59533 333 aa15.14■□□□□ 0.01
TRIM28-207ENST00000597136 NSUN2Q08J23 767 aaKnown RBP eCLIP15.14■□□□□ 0.01
TRIM28-207ENST00000597136 DNAH14Q0VDD8 3507 aa15.14■□□□□ 0.01
TRIM28-207ENST00000597136 ZNF235Q14590 738 aa15.14■□□□□ 0.01
TRIM28-207ENST00000597136 PMS2CLQ68D20 193 aa15.14■□□□□ 0.01
TRIM28-207ENST00000597136 GDPD4Q6W3E5 623 aa15.14■□□□□ 0.01
TRIM28-207ENST00000597136 PID1Q7Z2X4 250 aa15.14■□□□□ 0.01
TRIM28-207ENST00000597136 CAMK1DQ8IU85 385 aa15.14■□□□□ 0.01
TRIM28-207ENST00000597136 RHOXF2Q9BQY4 288 aa15.14■□□□□ 0.01
TRIM28-207ENST00000597136 ERP44Q9BS26 406 aa15.14■□□□□ 0.01
TRIM28-207ENST00000597136 PAK5Q9P286 719 aa15.14■□□□□ 0.01
TRIM28-207ENST00000597136 KLHL8Q9P2G9 620 aaPredicted RBP15.14■□□□□ 0.01
TRIM28-207ENST00000597136 DMGDHQ9UI17 866 aaKnown RBP15.14■□□□□ 0.01
TRIM28-207ENST00000597136 MYLKQ15746 1914 aa15.14■□□□□ 0.01
TRIM28-207ENST00000597136 SPTBN4Q9H254 2564 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 NDUFS2O75306 463 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 NEBLO76041 1014 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 HEXIM1O94992 359 aaKnown RBP15.13■□□□□ 0.01
TRIM28-207ENST00000597136 LMNAP02545 664 aaKnown RBP15.13■□□□□ 0.01
TRIM28-207ENST00000597136 HLA-DQB2P05538 268 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 ITIH2P19823 946 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 IVDP26440 423 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 MAOBP27338 520 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 CD68P34810 354 aaPredicted RBP15.13■□□□□ 0.01
TRIM28-207ENST00000597136 CSNK1DP48730 415 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 DHPSP49366 369 aaPredicted RBP15.13■□□□□ 0.01
TRIM28-207ENST00000597136 VPS41P49754 854 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 LRRC73Q5JTD7 316 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 PIP5KL1Q5T9C9 394 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 AGBL4Q5VU57 503 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 DUPD1Q68J44 220 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 C4orf22Q6V702 233 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 SLC36A4Q6YBV0 504 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 ARHGEF18Q6ZSZ5 1173 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 PARS2Q7L3T8 475 aaKnown RBP15.13■□□□□ 0.01
TRIM28-207ENST00000597136 DCLK2Q8N568 766 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 OR14C36Q8NHC7 312 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 CCHCR1Q8TD31 782 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 UBXN4Q92575 508 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 FAM131CQ96AQ9 280 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 HINFPQ9BQA5 517 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 CPEB1Q9BZB8 566 aaKnown RBP15.13■□□□□ 0.01
TRIM28-207ENST00000597136 BTBD1Q9H0C5 482 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 NOD2Q9HC29 1040 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 ASIC3Q9UHC3 531 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 ATP8A1Q9Y2Q0 1164 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 UTP11Q9Y3A2 253 aaKnown RBP15.13■□□□□ 0.01
TRIM28-207ENST00000597136 CEP250Q9BV73 2442 aa15.13■□□□□ 0.01
TRIM28-207ENST00000597136 PRR23AA6NEV1 266 aa15.12■□□□□ 0.01
TRIM28-207ENST00000597136 C16orf96A6NNT2 1141 aa15.12■□□□□ 0.01
TRIM28-207ENST00000597136 BHMG1C9JSJ3 638 aaPredicted RBP15.12■□□□□ 0.01
TRIM28-207ENST00000597136 SEMA4FO95754 770 aa15.12■□□□□ 0.01
TRIM28-207ENST00000597136 ADCY8P40145 1251 aa15.12■□□□□ 0.01
TRIM28-207ENST00000597136 RAD51Q06609 339 aa15.12■□□□□ 0.01
TRIM28-207ENST00000597136 NIPAL4Q0D2K0 466 aa15.12■□□□□ 0.01
TRIM28-207ENST00000597136 GPS1Q13098 491 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms