RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 SEC13P55735 322 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 CRADDP78560 199 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 CASP8Q14790 479 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 UAP1Q16222 522 aaPredicted RBP14.78□□□□□ -0.04
VRK3-212ENST00000596814 SLC44A4Q53GD3 710 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 CERCAMQ5T4B2 595 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 ARMC12Q5T9G4 340 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 DENND2CQ68D51 928 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 PAF1Q8N7H5 531 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 LPCAT1Q8NF37 534 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 GRIN3AQ8TCU5 1115 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 STAMBPL1Q96FJ0 436 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 EBNA1BP2Q99848 306 aaKnown RBP14.78□□□□□ -0.04
VRK3-212ENST00000596814 HEPHQ9BQS7 1158 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 ZDHHC4Q9NPG8 344 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 SAMD15Q9P1V8 674 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 SORCS3Q9UPU3 1222 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 PCDHB9Q9Y5E1 797 aa14.78□□□□□ -0.04
VRK3-212ENST00000596814 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.78□□□□□ -0.04
VRK3-212ENST00000596814 ANTXRLA6NF34 631 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 TRAFD1O14545 582 aaPredicted RBP14.77□□□□□ -0.05
VRK3-212ENST00000596814 RIPK2O43353 540 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 FZD6O60353 706 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 SIN3BO75182 1162 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 PGLSO95336 258 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 ACSL3O95573 720 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 TTC4O95801 387 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 PRLP01236 227 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 PDHA1P08559 390 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 KIR2DL1P43626 348 aaPredicted RBP14.77□□□□□ -0.05
VRK3-212ENST00000596814 POU6F1Q14863 301 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 MLF2Q15773 248 aaPredicted RBP14.77□□□□□ -0.05
VRK3-212ENST00000596814 KYNUQ16719 465 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 UBAP2Q5T6F2 1119 aaKnown RBP14.77□□□□□ -0.05
VRK3-212ENST00000596814 EMC10Q5UCC4 262 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 HDXQ7Z353 690 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 IGDCC3Q8IVU1 814 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 PALM2Q8IXS6 379 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 CHPFQ8IZ52 775 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 RMDN1Q96DB5 314 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 CFAP36Q96G28 342 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 ZNF641Q96N77 438 aaPredicted RBP14.77□□□□□ -0.05
VRK3-212ENST00000596814 ACOX2Q99424 681 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 NAT9Q9BTE0 207 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 EPB41L4BQ9H329 900 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 ZC3H7BQ9UGR2 993 aaKnown RBP14.77□□□□□ -0.05
VRK3-212ENST00000596814 SUN2Q9UH99 717 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 IL36AQ9UHA7 158 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 STON1Q9Y6Q2 735 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 WASF2Q9Y6W5 498 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 CKAP5Q14008 2032 aa14.77□□□□□ -0.05
VRK3-212ENST00000596814 C19orf67A6NJJ6 358 aa14.76□□□□□ -0.05
VRK3-212ENST00000596814 UGT2B4P06133 528 aa14.76□□□□□ -0.05
VRK3-212ENST00000596814 EPHX1P07099 455 aa14.76□□□□□ -0.05
VRK3-212ENST00000596814 ALADP13716 330 aa14.76□□□□□ -0.05
VRK3-212ENST00000596814 TIE1P35590 1138 aa14.76□□□□□ -0.05
VRK3-212ENST00000596814 GRIA4P48058 902 aa14.76□□□□□ -0.05
VRK3-212ENST00000596814 EPHB1P54762 984 aa14.76□□□□□ -0.05
VRK3-212ENST00000596814 RPL26P61254 145 aaKnown RBP14.76□□□□□ -0.05
VRK3-212ENST00000596814 ENPP2Q13822 863 aa14.76□□□□□ -0.05
VRK3-212ENST00000596814 ELAVL3Q14576 367 aaKnown RBP14.76□□□□□ -0.05
VRK3-212ENST00000596814 CFAP58Q5T655 872 aa14.76□□□□□ -0.05
VRK3-212ENST00000596814 C9orf64Q5T6V5 341 aa14.76□□□□□ -0.05
VRK3-212ENST00000596814 GDPD4Q6W3E5 623 aa14.76□□□□□ -0.05
VRK3-212ENST00000596814 CAPN12Q6ZSI9 719 aa14.76□□□□□ -0.05
VRK3-212ENST00000596814 CCNJLQ8IV13 435 aa14.76□□□□□ -0.05
VRK3-212ENST00000596814 PPHLN1Q8NEY8 458 aaKnown RBP14.76□□□□□ -0.05
VRK3-212ENST00000596814 OR8D1Q8WZ84 308 aa14.76□□□□□ -0.05
VRK3-212ENST00000596814 FAM3CQ92520 227 aa14.76□□□□□ -0.05
VRK3-212ENST00000596814 VOPP1Q96AW1 172 aa14.76□□□□□ -0.05
VRK3-212ENST00000596814 LRIG1Q96JA1 1093 aa14.76□□□□□ -0.05
VRK3-212ENST00000596814 OSBPL1AQ9BXW6 950 aa14.76□□□□□ -0.05
VRK3-212ENST00000596814 SUV39H2Q9H5I1 410 aa14.76□□□□□ -0.05
VRK3-212ENST00000596814 LRRC4CQ9HCJ2 640 aa14.76□□□□□ -0.05
VRK3-212ENST00000596814 RPL26L1Q9UNX3 145 aaKnown RBP14.76□□□□□ -0.05
VRK3-212ENST00000596814 MAN2B1O00754 1011 aa14.75□□□□□ -0.05
VRK3-212ENST00000596814 LEFTY1O75610 366 aa14.75□□□□□ -0.05
VRK3-212ENST00000596814 CTSLP07711 333 aa14.75□□□□□ -0.05
VRK3-212ENST00000596814 CHRM1P11229 460 aaPredicted RBP14.75□□□□□ -0.05
VRK3-212ENST00000596814 TSHRP16473 764 aa14.75□□□□□ -0.05
VRK3-212ENST00000596814 PGAM1P18669 254 aa14.75□□□□□ -0.05
VRK3-212ENST00000596814 SEPT6Q14141 434 aa14.75□□□□□ -0.05
VRK3-212ENST00000596814 QPCTQ16769 361 aa14.75□□□□□ -0.05
VRK3-212ENST00000596814 PCID2Q5JVF3 399 aa14.75□□□□□ -0.05
VRK3-212ENST00000596814 STK40Q8N2I9 435 aa14.75□□□□□ -0.05
VRK3-212ENST00000596814 KCNV2Q8TDN2 545 aa14.75□□□□□ -0.05
VRK3-212ENST00000596814 PTCD2Q8WV60 388 aaKnown RBP14.75□□□□□ -0.05
VRK3-212ENST00000596814 ECHDC3Q96DC8 303 aa14.75□□□□□ -0.05
VRK3-212ENST00000596814 VPS37BQ9H9H4 285 aa14.75□□□□□ -0.05
VRK3-212ENST00000596814 ZNF446Q9NWS9 450 aa14.75□□□□□ -0.05
VRK3-212ENST00000596814 SOX13Q9UN79 622 aa14.75□□□□□ -0.05
VRK3-212ENST00000596814 TCAF1Q9Y4C2 921 aa14.75□□□□□ -0.05
VRK3-212ENST00000596814 ATG2BQ96BY7 2078 aa14.75□□□□□ -0.05
VRK3-212ENST00000596814 A0A1W2PQ67 120 aa14.75□□□□□ -0.05
VRK3-212ENST00000596814 MAGEB16A2A368 324 aa14.75□□□□□ -0.05
VRK3-212ENST00000596814 SHISA7A6NL88 538 aa14.75□□□□□ -0.05
VRK3-212ENST00000596814 ANKRD66B4E2M5 251 aa14.75□□□□□ -0.05
VRK3-212ENST00000596814 SPAG6O75602 509 aa14.75□□□□□ -0.05
VRK3-212ENST00000596814 PRNPP04156 253 aa14.75□□□□□ -0.05
VRK3-212ENST00000596814 ABHD2P08910 425 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms