RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 MRFAP1Q9Y605 127 aa19.49■□□□□ 0.71
PNKP-207ENST00000596014 TRPM6Q9BX84 2022 aa19.48■□□□□ 0.71
PNKP-207ENST00000596014 TNRC6BQ9UPQ9 1833 aaKnown RBP19.48■□□□□ 0.71
PNKP-207ENST00000596014 TBC1D3DA0A087WVF3 549 aa19.48■□□□□ 0.71
PNKP-207ENST00000596014 TBC1D3IA0A087WXS9 549 aa19.48■□□□□ 0.71
PNKP-207ENST00000596014 TBC1D3EA0A087X179 549 aa19.48■□□□□ 0.71
PNKP-207ENST00000596014 TBC1D3KA0A087X1G2 549 aa19.48■□□□□ 0.71
PNKP-207ENST00000596014 TBC1D3FA6NER0 549 aaPredicted RBP19.48■□□□□ 0.71
PNKP-207ENST00000596014 TBC1D3LB9A6J9 549 aa19.48■□□□□ 0.71
PNKP-207ENST00000596014 CES2O00748 559 aa19.48■□□□□ 0.71
PNKP-207ENST00000596014 LIASO43766 372 aa19.48■□□□□ 0.71
PNKP-207ENST00000596014 MMP2P08253 660 aa19.48■□□□□ 0.71
PNKP-207ENST00000596014 SERPINF2P08697 491 aa19.48■□□□□ 0.71
PNKP-207ENST00000596014 TBC1D3HP0C7X1 549 aa19.48■□□□□ 0.71
PNKP-207ENST00000596014 CD68P34810 354 aaPredicted RBP19.48■□□□□ 0.71
PNKP-207ENST00000596014 ABL2P42684 1182 aa19.48■□□□□ 0.71
PNKP-207ENST00000596014 UGP2Q16851 508 aa19.48■□□□□ 0.71
PNKP-207ENST00000596014 PAPD7Q5XG87 772 aaKnown RBP19.48■□□□□ 0.71
PNKP-207ENST00000596014 TBC1D3GQ6DHY5 549 aa19.48■□□□□ 0.71
PNKP-207ENST00000596014 TBC1D3CQ6IPX1 549 aa19.48■□□□□ 0.71
PNKP-207ENST00000596014 SLC41A1Q8IVJ1 513 aa19.48■□□□□ 0.71
PNKP-207ENST00000596014 TBC1D3Q8IZP1 549 aaPredicted RBP19.48■□□□□ 0.71
PNKP-207ENST00000596014 PDCD6IPQ8WUM4 868 aaKnown RBP19.48■□□□□ 0.71
PNKP-207ENST00000596014 FOXJ1Q92949 421 aa19.48■□□□□ 0.71
PNKP-207ENST00000596014 RAB7BQ96AH8 199 aa19.48■□□□□ 0.71
PNKP-207ENST00000596014 OTOGLQ3ZCN5 2332 aa19.48■□□□□ 0.71
PNKP-207ENST00000596014 CTAGE9A4FU28 777 aa19.47■□□□□ 0.71
PNKP-207ENST00000596014 METTL12A8MUP2 240 aa19.47■□□□□ 0.71
PNKP-207ENST00000596014 C10orf142B7Z368 130 aa19.47■□□□□ 0.71
PNKP-207ENST00000596014 ZNF189O75820 626 aaPredicted RBP19.47■□□□□ 0.71
PNKP-207ENST00000596014 LMNAP02545 664 aaKnown RBP19.47■□□□□ 0.71
PNKP-207ENST00000596014 PRLRP16471 622 aa19.47■□□□□ 0.71
PNKP-207ENST00000596014 TCP1P17987 556 aaKnown RBP19.47■□□□□ 0.71
PNKP-207ENST00000596014 CD86P42081 329 aa19.47■□□□□ 0.71
PNKP-207ENST00000596014 DHPSP49366 369 aaPredicted RBP19.47■□□□□ 0.71
PNKP-207ENST00000596014 POLR2LP62875 67 aaKnown RBP19.47■□□□□ 0.71
PNKP-207ENST00000596014 OASLQ15646 514 aaKnown RBP19.47■□□□□ 0.71
PNKP-207ENST00000596014 CCNG2Q16589 344 aa19.47■□□□□ 0.71
PNKP-207ENST00000596014 LRRC73Q5JTD7 316 aa19.47■□□□□ 0.71
PNKP-207ENST00000596014 ARMCX6Q7L4S7 300 aa19.47■□□□□ 0.71
PNKP-207ENST00000596014 PRPF39Q86UA1 669 aaKnown RBP19.47■□□□□ 0.71
PNKP-207ENST00000596014 PAF1Q8N7H5 531 aa19.47■□□□□ 0.71
PNKP-207ENST00000596014 SPOCK2Q92563 424 aa19.47■□□□□ 0.71
PNKP-207ENST00000596014 HSPA12BQ96MM6 686 aa19.47■□□□□ 0.71
PNKP-207ENST00000596014 TMEM121Q9BTD3 319 aa19.47■□□□□ 0.71
PNKP-207ENST00000596014 PCDHB9Q9Y5E1 797 aa19.47■□□□□ 0.71
PNKP-207ENST00000596014 FADS3Q9Y5Q0 445 aa19.47■□□□□ 0.71
PNKP-207ENST00000596014 RIF1Q5UIP0 2472 aaKnown RBP19.47■□□□□ 0.71
PNKP-207ENST00000596014 A0A1W2PQ67 120 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 PRR23AA6NEV1 266 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 AREL1O15033 823 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 ZNF185O15231 689 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 AP1G1O43747 822 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 STK10O94804 968 aaKnown RBP19.46■□□□□ 0.71
PNKP-207ENST00000596014 ITIH2P19823 946 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 NFKB1P19838 968 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 SUOXP51687 545 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 SKOR1P84550 965 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 SNX1Q13596 522 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 LAIR1Q6GTX8 287 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 FAM71DQ8N9W8 422 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 LRRN4CLQ8ND94 238 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 ACTRT1Q8TDG2 376 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 BIRC7Q96CA5 298 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 LOXL4Q96JB6 756 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 RBM15Q96T37 977 aaKnown RBP eCLIP19.46■□□□□ 0.717e-9■■■□□ 16.1
PNKP-207ENST00000596014 PREBQ9HCU5 417 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.46■□□□□ 0.71
PNKP-207ENST00000596014 EP300Q09472 2414 aaPredicted RBP19.46■□□□□ 0.71
PNKP-207ENST00000596014 RALGAPA1Q6GYQ0 2036 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 CFAP69A5D8W1 941 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 UPK3BL1B0FP48 263 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 UPK3BL2E5RIL1 263 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 SPINT1O43278 529 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 FSBPO95073 299 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 PGLSO95336 258 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 XPAP23025 273 aaPredicted RBP19.46■□□□□ 0.71
PNKP-207ENST00000596014 ANKRD20A2Q5SQ80 823 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 ARMC12Q5T9G4 340 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 ANKRD20A1Q5TYW2 823 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 ANKRD20A3Q5VUR7 823 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 KIAA0895LQ68EN5 471 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 NEK5Q6P3R8 708 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 MNS1Q8NEH6 495 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 SPATA22Q8NHS9 363 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 TADA1Q96BN2 335 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 NAP1L3Q99457 506 aaPredicted RBP19.46■□□□□ 0.71
PNKP-207ENST00000596014 TDRD1Q9BXT4 1180 aaKnown RBP19.46■□□□□ 0.71
PNKP-207ENST00000596014 ZNF148Q9UQR1 794 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 SAR1BQ9Y6B6 198 aa19.46■□□□□ 0.71
PNKP-207ENST00000596014 PI4KAP42356 2102 aa19.45■□□□□ 0.7
PNKP-207ENST00000596014 C5orf60A6NFR6 353 aa19.45■□□□□ 0.7
PNKP-207ENST00000596014 PGRMC1O00264 195 aaKnown RBP19.45■□□□□ 0.7
PNKP-207ENST00000596014 TSPAN6O43657 245 aa19.45■□□□□ 0.7
PNKP-207ENST00000596014 FZD6O60353 706 aa19.45■□□□□ 0.7
PNKP-207ENST00000596014 PCDH8O95206 1070 aa19.45■□□□□ 0.7
PNKP-207ENST00000596014 IGHV4-34P06331 123 aa19.45■□□□□ 0.7
PNKP-207ENST00000596014 PDHA1P08559 390 aa19.45■□□□□ 0.7
PNKP-207ENST00000596014 STIP1P31948 543 aaKnown RBP19.45■□□□□ 0.7
PNKP-207ENST00000596014 GDF10P55107 478 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms