RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 HTRA2O43464 458 aaPredicted RBP14.48□□□□□ -0.09
LIG1-208ENST00000595758 TSPAN6O43657 245 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 LRP3O75074 770 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 SERPINF2P08697 491 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 CD27P26842 260 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 RBL1P28749 1068 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 HOXD12P35452 270 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 PPP2CBP62714 309 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 POLR2LP62875 67 aaKnown RBP14.48□□□□□ -0.09
LIG1-208ENST00000595758 PPP2CAP67775 309 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 SPEM2Q0P670 501 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 TRAF2Q12933 501 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 CCDC6Q16204 474 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 UGP2Q16851 508 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 LRRC73Q5JTD7 316 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 FAM182AQ5T1J6 154 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 PRPF39Q86UA1 669 aaKnown RBP14.48□□□□□ -0.09
LIG1-208ENST00000595758 TRIM69Q86WT6 500 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 HORMAD1Q86X24 394 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 ZSWIM9Q86XI8 627 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 PDCD6IPQ8WUM4 868 aaKnown RBP14.48□□□□□ -0.09
LIG1-208ENST00000595758 FEM1CQ96JP0 617 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 TEKT5Q96M29 485 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 VAT1Q99536 393 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 C10orf88Q9H8K7 445 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 VPS45Q9NRW7 570 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 EIF2B4Q9UI10 523 aaKnown RBP14.48□□□□□ -0.09
LIG1-208ENST00000595758 R3HDM2Q9Y2K5 976 aaKnown RBP14.48□□□□□ -0.09
LIG1-208ENST00000595758 RAI2Q9Y5P3 530 aa14.48□□□□□ -0.09
LIG1-208ENST00000595758 ATXN2Q99700 1313 aaKnown RBP14.47□□□□□ -0.09
LIG1-208ENST00000595758 CEP192Q8TEP8 1941 aa14.47□□□□□ -0.09
LIG1-208ENST00000595758 LATO43561 262 aa14.47□□□□□ -0.09
LIG1-208ENST00000595758 CEP104O60308 925 aa14.47□□□□□ -0.09
LIG1-208ENST00000595758 ZNF189O75820 626 aaPredicted RBP14.47□□□□□ -0.09
LIG1-208ENST00000595758 GNSP15586 552 aa14.47□□□□□ -0.09
LIG1-208ENST00000595758 ITIH2P19823 946 aa14.47□□□□□ -0.09
LIG1-208ENST00000595758 MAT2AP31153 395 aaKnown RBP14.47□□□□□ -0.09
LIG1-208ENST00000595758 CXCR5P32302 372 aa14.47□□□□□ -0.09
LIG1-208ENST00000595758 CD86P42081 329 aa14.47□□□□□ -0.09
LIG1-208ENST00000595758 RPS21P63220 83 aaKnown RBP14.47□□□□□ -0.09
LIG1-208ENST00000595758 ELP6Q0PNE2 266 aa14.47□□□□□ -0.09
LIG1-208ENST00000595758 IHHQ14623 411 aa14.47□□□□□ -0.09
LIG1-208ENST00000595758 PLA2G2CQ5R387 149 aa14.47□□□□□ -0.09
LIG1-208ENST00000595758 ARMC12Q5T9G4 340 aa14.47□□□□□ -0.09
LIG1-208ENST00000595758 ERAP2Q6P179 960 aa14.47□□□□□ -0.09
LIG1-208ENST00000595758 ADAT2Q7Z6V5 191 aaKnown RBP14.47□□□□□ -0.09
LIG1-208ENST00000595758 ALYREFQ86V81 257 aaKnown RBP14.47□□□□□ -0.09
LIG1-208ENST00000595758 SPOCK2Q92563 424 aa14.47□□□□□ -0.09
LIG1-208ENST00000595758 SLC25A51Q9H1U9 297 aa14.47□□□□□ -0.09
LIG1-208ENST00000595758 GLOD4Q9HC38 313 aa14.47□□□□□ -0.09
LIG1-208ENST00000595758 PCDH12Q9NPG4 1184 aa14.47□□□□□ -0.09
LIG1-208ENST00000595758 KLHL8Q9P2G9 620 aaPredicted RBP14.47□□□□□ -0.09
LIG1-208ENST00000595758 SUSD2Q9UGT4 822 aa14.47□□□□□ -0.09
LIG1-208ENST00000595758 TRHDEQ9UKU6 1024 aa14.47□□□□□ -0.09
LIG1-208ENST00000595758 ITM2BQ9Y287 266 aa14.47□□□□□ -0.09
LIG1-208ENST00000595758 PCDHB9Q9Y5E1 797 aa14.47□□□□□ -0.09
LIG1-208ENST00000595758 A0A1W2PPC4 97 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 RIOK3O14730 519 aaKnown RBP14.46□□□□□ -0.09
LIG1-208ENST00000595758 KCNN4O15554 427 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 SPINT1O43278 529 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 STK10O94804 968 aaKnown RBP14.46□□□□□ -0.09
LIG1-208ENST00000595758 PGLSO95336 258 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 CPP00450 1065 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 PRKCGP05129 697 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 MMP2P08253 660 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 ZNF806P0C7X5 589 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 CA4P22748 312 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 NUDT1P36639 197 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 GNG11P61952 73 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 SKOR1P84550 965 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 CSRP2Q16527 193 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 DUOXA1Q1HG43 343 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 ZNF284Q2VY69 593 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 SETMARQ53H47 684 aaPredicted RBP14.46□□□□□ -0.09
LIG1-208ENST00000595758 PEAR1Q5VY43 1037 aaPredicted RBP14.46□□□□□ -0.09
LIG1-208ENST00000595758 SEL1L3Q68CR1 1132 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 KIAA1161Q6NSJ0 714 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 PID1Q7Z2X4 250 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 RABEPKQ7Z6M1 372 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 ZNF567Q8N184 647 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 ZCCHC9Q8N567 271 aaKnown RBP14.46□□□□□ -0.09
LIG1-208ENST00000595758 C1orf216Q8TAB5 229 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 CEP76Q8TAP6 659 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 SLC35B2Q8TB61 432 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 KLK6Q92876 244 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 IMP4Q96G21 291 aaKnown RBP14.46□□□□□ -0.09
LIG1-208ENST00000595758 PBKQ96KB5 322 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 ORAI3Q9BRQ5 295 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 FRMD8P1Q9BZ68 369 aaPredicted RBP14.46□□□□□ -0.09
LIG1-208ENST00000595758 SMOC1Q9H4F8 434 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 EBF2Q9HAK2 575 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 PARD6AQ9NPB6 346 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 SEMA4GQ9NTN9 838 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 GGT7Q9UJ14 662 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 PHTF1Q9UMS5 762 aa14.46□□□□□ -0.09
LIG1-208ENST00000595758 ZFR2Q9UPR6 939 aaKnown RBP14.46□□□□□ -0.09
LIG1-208ENST00000595758 GVINP1Q7Z2Y8 2422 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 A0A1B0GTW7 788 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 IGLON5A6NGN9 336 aa14.45□□□□□ -0.1
LIG1-208ENST00000595758 PRR5-ARHGAP8B1AHC4 643 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms