RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 GIMD1P0DJR0 217 aa13.07□□□□□ -0.32
SCAF1-202ENST00000595242 TGM2P21980 687 aa13.07□□□□□ -0.32
SCAF1-202ENST00000595242 OAS2P29728 719 aaKnown RBP13.07□□□□□ -0.32
SCAF1-202ENST00000595242 MAT2AP31153 395 aaKnown RBP13.07□□□□□ -0.32
SCAF1-202ENST00000595242 HSPA9P38646 679 aaKnown RBP13.07□□□□□ -0.32
SCAF1-202ENST00000595242 PSMD8P48556 350 aa13.07□□□□□ -0.32
SCAF1-202ENST00000595242 ST8SIA6P61647 398 aa13.07□□□□□ -0.32
SCAF1-202ENST00000595242 RPL7AP62424 266 aaKnown RBP13.07□□□□□ -0.32
SCAF1-202ENST00000595242 DR1Q01658 176 aa13.07□□□□□ -0.32
SCAF1-202ENST00000595242 OGDHQ02218 1023 aa13.07□□□□□ -0.32
SCAF1-202ENST00000595242 KLF1Q13351 362 aaPredicted RBP13.07□□□□□ -0.32
SCAF1-202ENST00000595242 PDCLQ13371 301 aa13.07□□□□□ -0.32
SCAF1-202ENST00000595242 POLNQ7Z5Q5 900 aa13.07□□□□□ -0.32
SCAF1-202ENST00000595242 XYLT1Q86Y38 959 aa13.07□□□□□ -0.32
SCAF1-202ENST00000595242 JAMLQ86YT9 394 aa13.07□□□□□ -0.32
SCAF1-202ENST00000595242 FAM71BQ8TC56 605 aa13.07□□□□□ -0.32
SCAF1-202ENST00000595242 WFDC5Q8TCV5 224 aa13.07□□□□□ -0.32
SCAF1-202ENST00000595242 GRAMD1AQ96CP6 724 aa13.07□□□□□ -0.32
SCAF1-202ENST00000595242 C18orf8Q96DM3 657 aa13.07□□□□□ -0.32
SCAF1-202ENST00000595242 SGF29Q96ES7 293 aa13.07□□□□□ -0.32
SCAF1-202ENST00000595242 RBM41Q96IZ5 413 aaKnown RBP13.07□□□□□ -0.32
SCAF1-202ENST00000595242 MCEEQ96PE7 176 aa13.07□□□□□ -0.32
SCAF1-202ENST00000595242 CPXM1Q96SM3 734 aa13.07□□□□□ -0.32
SCAF1-202ENST00000595242 KCNK4Q9NYG8 393 aa13.07□□□□□ -0.32
SCAF1-202ENST00000595242 UTP11Q9Y3A2 253 aaKnown RBP13.07□□□□□ -0.32
SCAF1-202ENST00000595242 ENTPD2Q9Y5L3 495 aa13.07□□□□□ -0.32
SCAF1-202ENST00000595242 LRRK1Q38SD2 2015 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 ANKRD17O75179 2603 aaKnown RBP13.06□□□□□ -0.32
SCAF1-202ENST00000595242 LY6G6EA0A0G2JKS1 128 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 ESYT3A0FGR9 886 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 ENO4A6NNW6 628 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 M0QYV0 167 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 TNFSF15O95150 251 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 ERBB2P04626 1255 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 THEGLP0DJG4 465 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 RARAP10276 462 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 C5AR1P21730 350 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 COILP38432 576 aaPredicted RBP13.06□□□□□ -0.32
SCAF1-202ENST00000595242 HARS2P49590 506 aaKnown RBP13.06□□□□□ -0.32
SCAF1-202ENST00000595242 DUSP3P51452 185 aaPredicted RBP13.06□□□□□ -0.32
SCAF1-202ENST00000595242 COPS2P61201 443 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 TRIP4Q15650 581 aaPredicted RBP13.06□□□□□ -0.32
SCAF1-202ENST00000595242 ADGRF1Q5T601 910 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 ALS2CLQ60I27 953 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 TTC27Q6P3X3 843 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 PHLDB2Q86SQ0 1253 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 CLEC14AQ86T13 490 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 IFI44Q8TCB0 444 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 STK32AQ8WU08 396 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 KLHDC7BQ96G42 594 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 PSMG3-AS1Q96PY0 264 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 ERP44Q9BS26 406 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 HOMER3Q9NSC5 361 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 DDX56Q9NY93 547 aaKnown RBP13.06□□□□□ -0.32
SCAF1-202ENST00000595242 NLGN3Q9NZ94 848 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 DMTF1Q9Y222 760 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 MAN2B2Q9Y2E5 1009 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 U3KQA8 63 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 DOPEY1Q5JWR5 2465 aa13.06□□□□□ -0.32
SCAF1-202ENST00000595242 UNC13CQ8NB66 2214 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 TCRBV7S2A1N4TA0A589 114 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 CLEC18AA5D8T8 446 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 AGPSO00116 658 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 ADH1BP00325 375 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 FAM153BP0C7A2 387 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 ALPPL2P10696 532 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 RPL34P49207 117 aaKnown RBP13.05□□□□□ -0.32
SCAF1-202ENST00000595242 SGSHP51688 502 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 POM121L1PQ3SYA9 428 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 FAM153CQ494X1 144 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 DCUN1D2Q6PH85 259 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 CCDC137Q6PK04 289 aaKnown RBP13.05□□□□□ -0.32
SCAF1-202ENST00000595242 CLEC18BQ6UXF7 455 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.05□□□□□ -0.32
SCAF1-202ENST00000595242 SYDE1Q6ZW31 735 aaPredicted RBP13.05□□□□□ -0.32
SCAF1-202ENST00000595242 RCOR2Q8IZ40 523 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 ARHGAP18Q8N392 663 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 TSEN2Q8NCE0 465 aaKnown RBP13.05□□□□□ -0.32
SCAF1-202ENST00000595242 CLEC18CQ8NCF0 446 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 MAGOHBQ96A72 148 aaKnown RBP13.05□□□□□ -0.32
SCAF1-202ENST00000595242 TTC17Q96AE7 1141 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 PKNOX2Q96KN3 472 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 MRGPRX3Q96LB0 322 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 HEXIM2Q96MH2 286 aaKnown RBP13.05□□□□□ -0.32
SCAF1-202ENST00000595242 FAM129BQ96TA1 746 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 SH3GL2Q99962 352 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 TRIM51Q9BSJ1 452 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 SLC4A5Q9BY07 1137 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 CAAP1Q9H8G2 361 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 USP29Q9HBJ7 922 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 EVA1BQ9NVM1 165 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 KLHL11Q9NVR0 708 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 FAM153AQ9UHL3 310 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 STOML2Q9UJZ1 356 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 TSPAN16Q9UKR8 245 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 CA5BQ9Y2D0 317 aa13.05□□□□□ -0.32
SCAF1-202ENST00000595242 NEMP2A6NFY4 417 aa13.04□□□□□ -0.32
SCAF1-202ENST00000595242 TTC34A8MYJ7 566 aa13.04□□□□□ -0.32
SCAF1-202ENST00000595242 PRAMEF26H0Y7S4 382 aa13.04□□□□□ -0.32
SCAF1-202ENST00000595242 DAPK3O43293 454 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms