RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 DRGXA6NNA5 263 aa16.7■□□□□ 0.26
PRKCSH-217ENST00000592741 SOAT2O75908 522 aa16.7■□□□□ 0.26
PRKCSH-217ENST00000592741 ADSLP30566 484 aaPredicted RBP16.7■□□□□ 0.26
PRKCSH-217ENST00000592741 PPARGP37231 505 aaPredicted RBP16.7■□□□□ 0.26
PRKCSH-217ENST00000592741 MRPS35P82673 323 aaKnown RBP16.7■□□□□ 0.26
PRKCSH-217ENST00000592741 KLC1Q07866 573 aa16.7■□□□□ 0.26
PRKCSH-217ENST00000592741 TAF10Q12962 218 aa16.7■□□□□ 0.26
PRKCSH-217ENST00000592741 CSHL1Q14406 222 aa16.7■□□□□ 0.26
PRKCSH-217ENST00000592741 KLC3Q6P597 504 aa16.7■□□□□ 0.26
PRKCSH-217ENST00000592741 FBXW8Q8N3Y1 598 aa16.7■□□□□ 0.26
PRKCSH-217ENST00000592741 CPSF7Q8N684 471 aaKnown RBP16.7■□□□□ 0.26
PRKCSH-217ENST00000592741 TXNDC5Q8NBS9 432 aaKnown RBP16.7■□□□□ 0.26
PRKCSH-217ENST00000592741 OR13J1Q8NGT2 312 aa16.7■□□□□ 0.26
PRKCSH-217ENST00000592741 SHKBP1Q8TBC3 707 aa16.7■□□□□ 0.26
PRKCSH-217ENST00000592741 CCDC126Q96EE4 140 aa16.7■□□□□ 0.26
PRKCSH-217ENST00000592741 ZNF184Q99676 751 aaPredicted RBP16.7■□□□□ 0.26
PRKCSH-217ENST00000592741 UXTQ9UBK9 157 aaPredicted RBP16.7■□□□□ 0.26
PRKCSH-217ENST00000592741 PPM1HQ9ULR3 514 aa16.7■□□□□ 0.26
PRKCSH-217ENST00000592741 RGSL1A5PLK6 1076 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 SLC7A4O43246 635 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 SMNDC1O75940 238 aaKnown RBP eCLIP16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 IGLV3-27P01718 113 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 PDHA1P08559 390 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 LTA4HP09960 611 aaKnown RBP16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 NSUN2Q08J23 767 aaKnown RBP eCLIP16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 MGAT5BQ3V5L5 792 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 ZNF789Q5FWF6 425 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 TECRLQ5HYJ1 363 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 SIRPB2Q5JXA9 342 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 NXNQ6DKJ4 435 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 IRGCQ6NXR0 463 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 ADGRG6Q86SQ4 1221 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 MICAL1Q8TDZ2 1067 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 TADA1Q96BN2 335 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 SGF29Q96ES7 293 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 SEPT5Q99719 369 aaPredicted RBP16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 OLFM1Q99784 485 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 MFSD1Q9H3U5 465 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 COMMD8Q9NX08 183 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 MROH6A6NGR9 719 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 TRPC5OSA6NMA1 111 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 ETFBP38117 255 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 MAPKAPK2P49137 400 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 MSLNQ13421 630 aaPredicted RBP16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 SERINC3Q13530 473 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 LBRQ14739 615 aaKnown RBP16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 PDCD2Q16342 344 aaPredicted RBP16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 HECTD2Q5U5R9 776 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 RASIP1Q5U651 963 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 C16orf89Q6UX73 402 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 TRIM67Q6ZTA4 783 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 PTAR1Q7Z6K3 402 aaPredicted RBP16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 SNX32Q86XE0 403 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 CILP2Q8IUL8 1156 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 RP9Q8TA86 221 aaKnown RBP16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 ARRDC2Q8TBH0 407 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 SPPL2BQ8TCT7 592 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 CCDC124Q96CT7 223 aaKnown RBP16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 SPATA17Q96L03 361 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 G3BP2Q9UN86 482 aaKnown RBP16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 SLC27A5Q9Y2P5 690 aa16.69■□□□□ 0.26
PRKCSH-217ENST00000592741 MTMR11A4FU01 709 aa16.68■□□□□ 0.26
PRKCSH-217ENST00000592741 RBP1P09455 135 aa16.68■□□□□ 0.26
PRKCSH-217ENST00000592741 FGFR3P22607 806 aa16.68■□□□□ 0.26
PRKCSH-217ENST00000592741 YBEYP58557 167 aaPredicted RBP16.68■□□□□ 0.26
PRKCSH-217ENST00000592741 PRAMEP78395 509 aa16.68■□□□□ 0.26
PRKCSH-217ENST00000592741 PFKPQ01813 784 aa16.68■□□□□ 0.26
PRKCSH-217ENST00000592741 SP3Q02447 781 aa16.68■□□□□ 0.26
PRKCSH-217ENST00000592741 RING1Q06587 406 aa16.68■□□□□ 0.26
PRKCSH-217ENST00000592741 MTA1Q13330 715 aa16.68■□□□□ 0.26
PRKCSH-217ENST00000592741 CCNIQ14094 377 aa16.68■□□□□ 0.26
PRKCSH-217ENST00000592741 SH2D4BQ5SQS7 431 aa16.68■□□□□ 0.26
PRKCSH-217ENST00000592741 CIR1Q86X95 450 aaPredicted RBP16.68■□□□□ 0.26
PRKCSH-217ENST00000592741 RNF135Q8IUD6 432 aa16.68■□□□□ 0.26
PRKCSH-217ENST00000592741 PGBD5Q8N414 524 aa16.68■□□□□ 0.26
PRKCSH-217ENST00000592741 KDM1BQ8NB78 822 aa16.68■□□□□ 0.26
PRKCSH-217ENST00000592741 OR6P1Q8NGX9 317 aa16.68■□□□□ 0.26
PRKCSH-217ENST00000592741 FAM136AQ96C01 138 aa16.68■□□□□ 0.26
PRKCSH-217ENST00000592741 B3GALT6Q96L58 329 aa16.68■□□□□ 0.26
PRKCSH-217ENST00000592741 CATSPER2Q96P56 530 aa16.68■□□□□ 0.26
PRKCSH-217ENST00000592741 GPR62Q9BZJ7 368 aa16.68■□□□□ 0.26
PRKCSH-217ENST00000592741 ZNF385DQ9H6B1 395 aa16.68■□□□□ 0.26
PRKCSH-217ENST00000592741 GTSE1Q9NYZ3 720 aa16.68■□□□□ 0.26
PRKCSH-217ENST00000592741 POMPQ9Y244 141 aa16.68■□□□□ 0.26
PRKCSH-217ENST00000592741 LOC285095A0A1B0GVY8 99 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 TTC24A2A3L6 582 aaPredicted RBP16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 ATXN1LP0C7T5 689 aaKnown RBP16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 OR1E1P30953 314 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 PBX3P40426 434 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 NUDT2P50583 147 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 KPNA1P52294 538 aaPredicted RBP16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 MTTPP55157 894 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 GPR17Q13304 367 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 LAMB3Q13751 1172 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 CYLC2Q14093 348 aaPredicted RBP16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 HERC3Q15034 1050 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 SLC14A2Q15849 920 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 HPS6Q86YV9 775 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 AFAP1L2Q8N4X5 818 aa16.67■□□□□ 0.26
PRKCSH-217ENST00000592741 SLC26A7Q8TE54 656 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms