RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 PHACTR4Q8IZ21 702 aa19.06■□□□□ 0.64
CCDC43-205ENST00000592333 TP53I13Q8NBR0 393 aaPredicted RBP19.06■□□□□ 0.64
CCDC43-205ENST00000592333 ATL2Q8NHH9 583 aa19.06■□□□□ 0.64
CCDC43-205ENST00000592333 LMX1AQ8TE12 382 aa19.06■□□□□ 0.64
CCDC43-205ENST00000592333 FNIP1Q8TF40 1166 aa19.06■□□□□ 0.64
CCDC43-205ENST00000592333 HIC2Q96JB3 615 aa19.06■□□□□ 0.64
CCDC43-205ENST00000592333 SYT11Q9BT88 431 aa19.06■□□□□ 0.64
CCDC43-205ENST00000592333 HSD3B7Q9H2F3 369 aa19.06■□□□□ 0.64
CCDC43-205ENST00000592333 SUV39H2Q9H5I1 410 aa19.06■□□□□ 0.64
CCDC43-205ENST00000592333 PDFQ9HBH1 243 aa19.06■□□□□ 0.64
CCDC43-205ENST00000592333 LHX3Q9UBR4 397 aa19.06■□□□□ 0.64
CCDC43-205ENST00000592333 TEX51A0A1B0GUA7 166 aa19.05■□□□□ 0.64
CCDC43-205ENST00000592333 ARHGAP42A6NI28 874 aa19.05■□□□□ 0.64
CCDC43-205ENST00000592333 PRAMEF11O60813 436 aa19.05■□□□□ 0.64
CCDC43-205ENST00000592333 MMP20O60882 483 aa19.05■□□□□ 0.64
CCDC43-205ENST00000592333 USP12O75317 370 aa19.05■□□□□ 0.64
CCDC43-205ENST00000592333 CSO75390 466 aaKnown RBP19.05■□□□□ 0.64
CCDC43-205ENST00000592333 GZMAP12544 262 aa19.05■□□□□ 0.64
CCDC43-205ENST00000592333 ATP1A3P13637 1013 aa19.05■□□□□ 0.64
CCDC43-205ENST00000592333 TNFAIP3P21580 790 aa19.05■□□□□ 0.64
CCDC43-205ENST00000592333 HTR1BP28222 390 aa19.05■□□□□ 0.64
CCDC43-205ENST00000592333 EIF4A3P38919 411 aaKnown RBP19.05■□□□□ 0.64
CCDC43-205ENST00000592333 TPI1P60174 286 aa19.05■□□□□ 0.64
CCDC43-205ENST00000592333 PPARDQ03181 441 aa19.05■□□□□ 0.64
CCDC43-205ENST00000592333 NSUN2Q08J23 767 aaKnown RBP eCLIP19.05■□□□□ 0.64
CCDC43-205ENST00000592333 MAMLD1Q13495 774 aa19.05■□□□□ 0.64
CCDC43-205ENST00000592333 RFTN1Q14699 578 aaPredicted RBP19.05■□□□□ 0.64
CCDC43-205ENST00000592333 LRRC14Q15048 493 aa19.05■□□□□ 0.64
CCDC43-205ENST00000592333 KLHL40Q2TBA0 621 aa19.05■□□□□ 0.64
CCDC43-205ENST00000592333 PRRT3Q5FWE3 981 aa19.05■□□□□ 0.64
CCDC43-205ENST00000592333 TPRG1LQ5T0D9 272 aa19.05■□□□□ 0.64
CCDC43-205ENST00000592333 ERMARDQ5T6L9 678 aa19.05■□□□□ 0.64
CCDC43-205ENST00000592333 ERAP2Q6P179 960 aa19.05■□□□□ 0.64
CCDC43-205ENST00000592333 SCG3Q8WXD2 468 aaKnown RBP19.05■□□□□ 0.64
CCDC43-205ENST00000592333 BPIFA3Q9BQP9 254 aa19.05■□□□□ 0.64
CCDC43-205ENST00000592333 KLC2Q9H0B6 622 aa19.05■□□□□ 0.64
CCDC43-205ENST00000592333 PCDHB1Q9Y5F3 818 aa19.05■□□□□ 0.64
CCDC43-205ENST00000592333 SMG1Q96Q15 3661 aaKnown RBP19.05■□□□□ 0.64
CCDC43-205ENST00000592333 ANXA6P08133 673 aa19.04■□□□□ 0.64
CCDC43-205ENST00000592333 ALPIP09923 528 aa19.04■□□□□ 0.64
CCDC43-205ENST00000592333 HCAR3P49019 387 aa19.04■□□□□ 0.64
CCDC43-205ENST00000592333 TLE3Q04726 772 aa19.04■□□□□ 0.64
CCDC43-205ENST00000592333 ELOCQ15369 112 aa19.04■□□□□ 0.64
CCDC43-205ENST00000592333 CDKN3Q16667 212 aa19.04■□□□□ 0.64
CCDC43-205ENST00000592333 DEFB133Q30KQ1 61 aa19.04■□□□□ 0.64
CCDC43-205ENST00000592333 CCDC183Q5T5S1 534 aa19.04■□□□□ 0.64
CCDC43-205ENST00000592333 ESRP1Q6NXG1 681 aaKnown RBP19.04■□□□□ 0.64
CCDC43-205ENST00000592333 BBC3Q96PG8 261 aaPredicted RBP19.04■□□□□ 0.64
CCDC43-205ENST00000592333 DPH1Q9BZG8 443 aa19.04■□□□□ 0.64
CCDC43-205ENST00000592333 THSD1Q9NS62 852 aa19.04■□□□□ 0.64
CCDC43-205ENST00000592333 PCDHGA8Q9Y5G5 932 aa19.04■□□□□ 0.64
CCDC43-205ENST00000592333 BPTFQ12830 3046 aa19.03■□□□□ 0.64
CCDC43-205ENST00000592333 CPED1A4D0V7 1026 aa19.03■□□□□ 0.64
CCDC43-205ENST00000592333 ATXN7O15265 892 aaPredicted RBP19.03■□□□□ 0.64
CCDC43-205ENST00000592333 GCATO75600 419 aa19.03■□□□□ 0.64
CCDC43-205ENST00000592333 RNF8O76064 485 aa19.03■□□□□ 0.64
CCDC43-205ENST00000592333 HK3P52790 923 aa19.03■□□□□ 0.64
CCDC43-205ENST00000592333 ADKP55263 362 aaKnown RBP19.03■□□□□ 0.64
CCDC43-205ENST00000592333 POLR2LP62875 67 aaKnown RBP19.03■□□□□ 0.64
CCDC43-205ENST00000592333 GABREP78334 506 aa19.03■□□□□ 0.64
CCDC43-205ENST00000592333 CFAP58Q5T655 872 aa19.03■□□□□ 0.64
CCDC43-205ENST00000592333 FAXCQ5TGI0 409 aa19.03■□□□□ 0.64
CCDC43-205ENST00000592333 TMCO4Q5TGY1 634 aa19.03■□□□□ 0.64
CCDC43-205ENST00000592333 AFMIDQ63HM1 303 aa19.03■□□□□ 0.64
CCDC43-205ENST00000592333 GUSBP11Q6P575 273 aa19.03■□□□□ 0.64
CCDC43-205ENST00000592333 RBM44Q6ZP01 1051 aaKnown RBP19.03■□□□□ 0.64
CCDC43-205ENST00000592333 EFL1Q7Z2Z2 1120 aaKnown RBP19.03■□□□□ 0.64
CCDC43-205ENST00000592333 GPR155Q7Z3F1 870 aa19.03■□□□□ 0.64
CCDC43-205ENST00000592333 LZTR1Q8N653 840 aa19.03■□□□□ 0.64
CCDC43-205ENST00000592333 OR6C4Q8NGE1 309 aa19.03■□□□□ 0.64
CCDC43-205ENST00000592333 SPOCK2Q92563 424 aa19.03■□□□□ 0.64
CCDC43-205ENST00000592333 LRRC61Q9BV99 259 aa19.03■□□□□ 0.64
CCDC43-205ENST00000592333 ATP13A3Q9H7F0 1226 aa19.03■□□□□ 0.64
CCDC43-205ENST00000592333 MBNL1Q9NR56 388 aaKnown RBP19.03■□□□□ 0.64
CCDC43-205ENST00000592333 AIPL1Q9NZN9 384 aa19.03■□□□□ 0.64
CCDC43-205ENST00000592333 AP4E1Q9UPM8 1137 aa19.03■□□□□ 0.64
CCDC43-205ENST00000592333 ASXL3Q9C0F0 2248 aa19.02■□□□□ 0.64
CCDC43-205ENST00000592333 PTPRQQ9UMZ3 2332 aa19.02■□□□□ 0.64
CCDC43-205ENST00000592333 TMEM191CA6NGB0 347 aa19.02■□□□□ 0.64
CCDC43-205ENST00000592333 EEF2KO00418 725 aaKnown RBP19.02■□□□□ 0.64
CCDC43-205ENST00000592333 YY2O15391 372 aa19.02■□□□□ 0.64
CCDC43-205ENST00000592333 RASGRP1O95267 797 aa19.02■□□□□ 0.64
CCDC43-205ENST00000592333 MPOP05164 745 aa19.02■□□□□ 0.64
CCDC43-205ENST00000592333 TGM2P21980 687 aa19.02■□□□□ 0.64
CCDC43-205ENST00000592333 PSMA2P25787 234 aa19.02■□□□□ 0.64
CCDC43-205ENST00000592333 SERPINA4P29622 427 aa19.02■□□□□ 0.64
CCDC43-205ENST00000592333 OGDHQ02218 1023 aa19.02■□□□□ 0.64
CCDC43-205ENST00000592333 MTM1Q13496 603 aa19.02■□□□□ 0.64
CCDC43-205ENST00000592333 IRF4Q15306 451 aa19.02■□□□□ 0.64
CCDC43-205ENST00000592333 BROXQ5VW32 411 aa19.02■□□□□ 0.64
CCDC43-205ENST00000592333 SPACA3Q8IXA5 215 aa19.02■□□□□ 0.64
CCDC43-205ENST00000592333 RBFAQ8N0V3 343 aa19.02■□□□□ 0.64
CCDC43-205ENST00000592333 CCDC97Q96F63 343 aaPredicted RBP19.02■□□□□ 0.64
CCDC43-205ENST00000592333 CRELD1Q96HD1 420 aa19.02■□□□□ 0.64
CCDC43-205ENST00000592333 FCRL3Q96P31 734 aaPredicted RBP19.02■□□□□ 0.64
CCDC43-205ENST00000592333 LGMNQ99538 433 aa19.02■□□□□ 0.64
CCDC43-205ENST00000592333 WRAP53Q9BUR4 548 aaKnown RBP19.02■□□□□ 0.64
CCDC43-205ENST00000592333 EDEM3Q9BZQ6 932 aa19.02■□□□□ 0.64
CCDC43-205ENST00000592333 PCDH12Q9NPG4 1184 aa19.02■□□□□ 0.64
CCDC43-205ENST00000592333 RTN4Q9NQC3 1192 aaKnown RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms